Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043445.1 Olea europaea HOM05D003115 ORTHO05D003595 0.0e+00 2067.0 1045 100.0
Oeu002918.1 Olea europaea HOM05D003115 ORTHO05D003595 0.0e+00 1709.1 1045 83.0
Dinv16255 Davidia involucrata HOM05D003115 ORTHO05D003595 0.0e+00 1230.3 1046 61.1
Migut.B01882 Erythranthe guttata HOM05D003115 ORTHO05D003595 0.0e+00 1141.3 1050 57.1
Solyc09g092240.3 Solanum lycopersicum HOM05D003115 ORTHO05D003595 0.0e+00 1138.6 1045 56.0
Actinidia35847 Actinidia chinensis HOM05D003115 ORTHO05D003595 0.0e+00 1136.7 1053 57.4
CSS0038204 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 0.0e+00 1130.9 1050 56.5
Sopen09g035170 Solanum pennellii HOM05D003115 ORTHO05D003595 0.0e+00 1129.8 1045 55.6
CSS0000754 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 0.0e+00 1126.7 1050 56.3
vmacro00444 Vaccinium macrocarpon HOM05D003115 ORTHO05D003595 0.0e+00 1121.7 1056 55.6
TAR636G1491 Trochodendron aralioides HOM05D003115 ORTHO05D003595 0.0e+00 1087.4 1053 54.1
SalBow3G3081 Salvia bowleyana HOM05D003115 ORTHO05D003595 7.1e-312 1074.3 1049 54.1
Prupe.3G074200 Prunus persica HOM05D003115 ORTHO05D003595 7.1e-312 1073.9 1050 54.1
QL04p081909 Quercus lobata HOM05D003115 ORTHO05D003595 2.9e-311 1072.0 1055 54.1
Hma1.2p1_0039F.1_g024560 Hydrangea macrophylla HOM05D003115 ORTHO05D003595 1.4e-310 1069.7 1127 51.4
Prupe.3G077100 Prunus persica HOM05D003115 ORTHO05D003595 1.9e-310 1069.3 1050 53.9
GSVIVG01021009001 Vitis vinifera HOM05D003115 ORTHO05D003595 2.4e-310 1068.9 1046 54.9
Rhsim09G0059200 Rhododendron simsii HOM05D003115 ORTHO05D003595 1.5e-307 1059.7 1116 52.2
Atru.chr10.1944 Acer truncatum HOM05D003115 ORTHO05D003595 2.8e-306 1055.4 1050 54.2
Thecc.04G196300 Theobroma cacao HOM05D003115 ORTHO05D003595 1.8e-305 1052.7 1054 53.2
CiPaw.14G076100 Carya illinoinensis HOM05D003115 ORTHO05D003595 3.2e-302 1042.0 1058 53.1
TWI56G0473 Tripterygium wilfordii HOM05D003115 ORTHO05D003595 1.6e-301 1039.6 1054 51.9
Gohir.A10G128200 Gossypium hirsutum HOM05D003115 ORTHO05D003595 2.7e-301 1038.9 1055 52.6
Cc00_g24210 Coffea canephora HOM05D003115 ORTHO05D003595 1.7e-300 1036.2 1039 53.5
COL.COLO4_20215 Corchorus olitorius HOM05D003115 ORTHO05D003595 4.3e-299 1031.6 1056 52.6
Potri.001G318800 Populus trichocarpa HOM05D003115 ORTHO05D003595 4.3e-299 1031.6 1053 51.9
Gohir.D10G137700 Gossypium hirsutum HOM05D003115 ORTHO05D003595 7.3e-299 1030.8 1055 52.5
Peaxi162Scf00047g00136 Petunia axillaris HOM05D003115 ORTHO05D003595 9.6e-299 1030.4 1076 51.3
MD17G1201300 Malus domestica HOM05D003115 ORTHO05D003595 1.1e-297 1026.9 1058 52.0
Duzib212G0201 Durio zibethinus HOM05D003115 ORTHO05D003595 3.1e-297 1025.4 1053 52.3
Gorai.011G152900 Gossypium raimondii HOM05D003115 ORTHO05D003595 3.1e-297 1025.4 1055 52.5
COL.COLO4_33741 Corchorus olitorius HOM05D003115 ORTHO05D003595 4.0e-297 1025.0 1084 51.9
Manes.15G056200 Manihot esculenta HOM05D003115 ORTHO05D003595 9.9e-296 1020.4 1055 51.5
Nitab4.5_0012127g0010 Nicotiana tabacum HOM05D003115 ORTHO05D003595 7.1e-294 1014.2 1029 52.3
RcHm_v2.0_Chr2g0137101 Rosa chinensis HOM05D003115 ORTHO05D003595 9.3e-294 1013.8 1047 52.1
Sabra16G0201800 Salix brachista HOM05D003115 ORTHO05D003595 1.9e-291 1006.1 1056 51.6
Lj6C385T7 Lonicera japonica HOM05D003115 ORTHO05D003595 1.8e-289 999.6 1042 52.0
SGA_v2.0_scaffold5G03024 Striga asiatica HOM05D003115 ORTHO05D003595 5.3e-289 998.0 1110 50.9
Lsat_1_v5_gn_6_59340 Lactuca sativa HOM05D003115 ORTHO05D003595 3.4e-288 995.3 1042 51.0
DCAR_007830 Daucus carota HOM05D003115 ORTHO05D003595 3.3e-283 978.8 1038 51.0
Nn4g23612 Nelumbo nucifera HOM05D003115 ORTHO05D003595 4.8e-282 974.9 1044 49.4
Nitab4.5_0000697g0090 Nicotiana tabacum HOM05D003115 ORTHO05D003595 1.8e-281 973.0 1072 49.8
Ciclev10004117m.g Citrus clementina HOM05D003115 ORTHO05D003595 2.0e-280 969.5 1050 50.6
Cfa009508 Carpinus fangiana HOM05D003115 ORTHO05D003595 4.5e-280 968.4 1059 51.4
FAN09G2094 Fragaria x ananassa HOM05D003115 ORTHO05D003595 2.2e-279 966.1 1063 50.4
FvH4_6g30710 Fragaria vesca HOM05D003115 ORTHO05D003595 4.9e-279 964.9 1045 50.7
PGR119G1374 Punica granatum HOM05D003115 ORTHO05D003595 2.4e-278 962.6 1042 50.1
FAN05G1620 Fragaria x ananassa HOM05D003115 ORTHO05D003595 7.1e-278 961.1 1063 50.0
FAN02G0145 Fragaria x ananassa HOM05D003115 ORTHO05D003595 2.1e-277 959.5 1063 50.0
MBI17_g03746_MAGBIO Magnolia biondii HOM05D003115 ORTHO05D003595 2.1e-277 959.5 1050 50.0
HanXRQChr17g0546471 Helianthus annuus HOM05D003115 ORTHO05D003595 5.1e-276 954.9 1042 49.4
FAN14G0460 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.1e-275 953.7 1061 49.9
Aqoxy5G00431 Aquilegia oxysepala HOM05D003115 ORTHO05D003595 2.8e-274 949.1 1057 48.6
ECA233G4989 Erigeron canadensis HOM05D003115 ORTHO05D003595 2.8e-274 949.1 1036 49.0
Haze_07640 Corylus avellana HOM05D003115 ORTHO05D003595 5.3e-273 944.9 965 54.5
Glyma.18G016000 Glycine max HOM05D003115 ORTHO05D003595 1.4e-265 920.2 1061 48.3
Medtr3g083970 Medicago truncatula HOM05D003115 ORTHO05D003595 1.2e-264 917.1 1051 47.5
Atru.chr4.1597 Acer truncatum HOM05D003115 ORTHO05D003595 4.5e-264 915.2 1053 49.6
Ca_07922_v3 Cicer arietinum L. HOM05D003115 ORTHO05D003595 1.9e-262 909.8 1052 46.8
Sed0014363 Sechium edule HOM05D003115 ORTHO05D003595 1.2e-261 907.1 1046 47.4
Hund11640 Selenicereus undatus HOM05D003115 ORTHO05D003595 2.7e-261 906.0 1059 47.5
Lj6g0020396 Lotus japonicus HOM05D003115 ORTHO05D003595 7.9e-261 904.4 1056 46.6
TPR.G14704 Trifolium pratense HOM05D003115 ORTHO05D003595 8.8e-260 901.0 1077 46.5
Phvul.001G253000 Phaseolus vulgaris HOM05D003115 ORTHO05D003595 5.3e-257 891.7 1057 47.2
MELO3C020422.2 Cucumis melo HOM05D003115 ORTHO05D003595 3.4e-256 889.0 1049 47.5
PSO210G2420 Papaver somniferum HOM05D003115 ORTHO05D003595 2.2e-255 886.3 1059 47.7
Sc25g0005820 Simmondsia chinensis HOM05D003115 ORTHO05D003595 6.5e-255 884.8 1054 47.4
ClCG06G007990 Citrullus lanatus HOM05D003115 ORTHO05D003595 1.7e-250 870.2 1056 46.5
CsaV3_2G011790 Cucumis sativus L. HOM05D003115 ORTHO05D003595 4.8e-250 868.6 1049 46.6
VMungo1383G2293 Vigna mungo HOM05D003115 ORTHO05D003595 3.4e-248 862.4 1049 46.2
arahy.Tifrunner.gnm1.ann1.01WSAY Arachis hypogaea HOM05D003115 ORTHO05D003595 1.7e-247 860.1 1092 44.2
PSO832G1670 Papaver somniferum HOM05D003115 ORTHO05D003595 1.9e-246 856.7 1058 46.6
arahy.Tifrunner.gnm1.ann1.QS081X Arachis hypogaea HOM05D003115 ORTHO05D003595 8.0e-245 851.3 1106 43.8
THA.LOC104808700 Tarenaya hassleriana HOM05D003115 ORTHO05D003595 1.5e-243 847.0 1050 46.3
AUR62018566 Chenopodium quinoa HOM05D003115 ORTHO05D003595 1.4e-236 823.9 1050 44.0
Lalb_Chr23g0269101 Lupinus albus HOM05D003115 ORTHO05D003595 6.3e-234 815.1 1066 44.1
Ah.04g149340 Amaranthus hybridus HOM05D003115 ORTHO05D003595 1.4e-233 813.9 1053 43.4
EL10Ac3g07463 Beta vulgaris HOM05D003115 ORTHO05D003595 3.5e-232 809.3 1053 42.9
Carub.0007s0955 Capsella rubella HOM05D003115 ORTHO05D003595 3.6e-221 772.7 1048 43.4
Aa31LG2G19350 Aethionema arabicum HOM05D003115 ORTHO05D003595 8.9e-220 768.1 1054 43.4
AL7G21090 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 2.2e-218 763.5 1048 42.7
Thhalv10024182m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 3.1e-217 759.6 1056 42.6
Eucgr.H00031 Eucalyptus grandis HOM05D003115 ORTHO05D003595 1.3e-215 754.2 1053 41.7
Sp7g28860 Schrenkiella parvula HOM05D003115 ORTHO05D003595 5.0e-215 752.3 1050 43.6
AL1G38530 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 4.3e-214 749.2 1043 42.7
ATR0665G483 Amborella trichopoda HOM05D003115 ORTHO05D003595 8.3e-210 734.9 1111 40.1
BcaNung01550 Brassica carinata HOM05D003115 ORTHO05D003595 2.7e-208 729.9 1053 41.2
AT4G30990 Arabidopsis thaliana HOM05D003115 ORTHO05D003595 7.8e-208 728.4 1059 41.4
Thhalv10009353m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 1.7e-207 727.2 1033 41.5
CARHR238880 Cardamine hirsuta HOM05D003115 ORTHO05D003595 1.1e-206 724.5 1066 41.7
Carub.0005s0720 Capsella rubella HOM05D003115 ORTHO05D003595 2.3e-204 716.8 1051 40.6
AL1G41060 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 4.0e-204 716.1 1046 40.2
Carub.0001s2398 Capsella rubella HOM05D003115 ORTHO05D003595 9.8e-203 711.4 1052 41.3
CDE07G0754 Ceratophyllum demersum HOM05D003115 ORTHO05D003595 1.6e-200 704.1 986 40.9
BraA03t15089Z Brassica rapa HOM05D003115 ORTHO05D003595 7.8e-200 701.8 1054 41.0
CARHR024920 Cardamine hirsuta HOM05D003115 ORTHO05D003595 6.6e-199 698.7 1042 40.7
A03p60500 Brassica napus HOM05D003115 ORTHO05D003595 8.6e-199 698.4 1054 41.0
BcaNung02730 Brassica carinata HOM05D003115 ORTHO05D003595 1.4e-196 691.0 1050 41.0
C07p58370 Brassica napus HOM05D003115 ORTHO05D003595 2.9e-194 683.3 1047 40.7
AL1G39310 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 3.7e-194 682.9 1052 38.9
BolC7t46291H Brassica oleracea HOM05D003115 ORTHO05D003595 1.6e-192 677.6 1051 40.2
Zm00001eb121880 Zea mays HOM05D003115 ORTHO05D003595 1.9e-190 670.6 1067 39.0
AUR62020852 Chenopodium quinoa HOM05D003115 ORTHO05D003595 4.7e-189 666.0 1372 32.7
SEGI_06154 Sequoiadendron giganteum HOM05D003115 ORTHO05D003595 1.4e-177 627.9 1047 36.6
HPP92_007257 Vanilla planifolia HOM05D003115 ORTHO05D003595 2.0e-134 484.6 582 45.4
Pp3c3_18970 Physcomitrium patens HOM05D003115 ORTHO05D003595 2.8e-125 454.1 1095 29.5
Cpa.g.sc83.36 Carica papaya HOM05D003115 ORTHO05D003595 1.2e-123 448.7 532 46.6
unitig_578.g16273 Utricularia gibba HOM05D003115 ORTHO05D003595 3.5e-115 420.6 1058 30.4
CANSAT78G0886 Cannabis sativa HOM05D003115 ORTHO05D003595 2.6e-110 404.4 376 53.2
Mapoly0054s0075 Marchantia polymorpha HOM05D003115 ORTHO05D003595 2.4e-108 397.9 1079 27.0
BcaC05g26358 Brassica carinata HOM05D003115 ORTHO05D003595 5.9e-107 393.3 505 45.5
C05p23810 Brassica napus HOM05D003115 ORTHO05D003595 1.1e-105 389.0 908 31.9
Cc00_g35730 Coffea canephora HOM05D003115 ORTHO05D003595 9.5e-105 386.0 323 61.0
BolC5t31100H Brassica oleracea HOM05D003115 ORTHO05D003595 1.8e-103 381.7 908 31.7
AagrBONN_evm.TU.Sc2ySwM_228.2833 Anthoceros agrestis HOM05D003115 ORTHO05D003595 5.9e-99 366.7 1097 27.3
RcHm_v2.0_Chr2g0136151 Rosa chinensis HOM05D003115 ORTHO05D003595 6.8e-87 326.6 527 38.5
SMO164G0231 Selaginella moellendorffii HOM05D003115 ORTHO05D003595 3.0e-82 311.2 1049 26.5
A09p40420 Brassica napus HOM05D003115 ORTHO05D003595 6.0e-75 287.0 325 49.5
BraA09t39538Z Brassica rapa HOM05D003115 ORTHO05D003595 6.0e-75 287.0 325 49.5
CiPaw.14G076400 Carya illinoinensis HOM05D003115 ORTHO05D003595 2.9e-61 241.5 306 48.4
Cc00_g09590 Coffea canephora HOM05D003115 ORTHO05D003595 2.7e-59 235.0 201 61.7
Rhsim07G0171200 Rhododendron simsii HOM05D003115 ORTHO05D003595 2.1e-43 182.2 196 51.5
HPP92_007263 Vanilla planifolia HOM05D003115 ORTHO05D003595 3.9e-42 177.9 188 50.5
Cpa.g.c46004 Carica papaya HOM05D003115 ORTHO05D003595 1.6e-35 156.0 130 60.8
Cfa010533 Carpinus fangiana HOM05D003115 ORTHO05D003595 3.0e-34 151.8 214 41.1
Cpa.g.sc83.40 Carica papaya HOM05D003115 ORTHO05D003595 2.6e-30 138.7 109 66.1
Actinidia30876 Actinidia chinensis HOM05D003115 ORTHO05D003595 1.8e-23 115.9 131 46.6
CANSAT78G1406 Cannabis sativa HOM05D003115 ORTHO05D003595 9.4e-20 103.6 135 42.2
HPP92_007267 Vanilla planifolia HOM05D003115 ORTHO05D003595 1.0e-18 100.1 189 37.6
Zm00001eb154910 Zea mays HOM05D003115 ORTHO05D029342 2.6e-17 95.5 168 33.3
Zm00001eb092010 Zea mays HOM05D003115 ORTHO05D029342 7.4e-17 94.0 168 32.7
Actinidia30874 Actinidia chinensis HOM05D003115 ORTHO05D003595 5.5e-12 77.8 53 64.2
Actinidia30875 Actinidia chinensis HOM05D003115 ORTHO05D003595 7.2e-12 77.4 71 56.3
Cre10.g461000 Chlamydomonas reinhardtii HOM05D003115 ORTHO05D003595 1.1e-07 63.5 267 24.3


User provided reference genes

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