Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 1.7e-94 349.4 178 100.0
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 3.4e-87 325.1 178 91.6
Oeu060879.1 Olea europaea HOM05D009933 ORTHO05D012084 1.3e-46 190.3 174 55.7
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 8.2e-25 117.9 173 35.8
Migut.I00636 Erythranthe guttata HOM05D009933 ORTHO05D012084 2.6e-23 112.8 169 37.3
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 4.5e-23 112.1 174 36.8
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 5.9e-23 111.7 150 38.7
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 1.3e-22 110.5 150 38.0
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 1.7e-22 110.2 153 37.3
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 3.8e-22 109.0 168 36.9
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 2.1e-20 103.2 166 40.4
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 7.9e-20 101.3 150 37.3
unitig_60.g25616 Utricularia gibba HOM05D009933 ORTHO05D012084 3.0e-19 99.4 162 32.7
Peaxi162Scf01623g00014 Petunia axillaris HOM05D009933 ORTHO05D012084 1.1e-18 97.4 153 35.3
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 6.3e-17 91.7 164 36.6
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 1.1e-16 90.9 164 34.1
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 1.1e-16 90.9 164 35.4
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 1.4e-16 90.5 165 35.8
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 3.1e-16 89.4 163 35.6
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 9.1e-16 87.8 180 31.7
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 9.1e-16 87.8 115 43.5
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 1.2e-15 87.4 172 32.0
Eucgr.E00366 Eucalyptus grandis HOM05D008339 ORTHO05D009712 1.2e-15 87.4 160 34.4
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 1.2e-15 87.4 154 32.5
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 1.2e-15 87.4 169 33.1
PGSC0003DMG400003969 Solanum tuberosum HOM05D009933 ORTHO05D012084 2.0e-15 86.7 146 32.2
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 2.6e-15 86.3 148 33.8
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 2.6e-15 86.3 165 30.9
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 2.6e-15 86.3 168 31.5
Solyc08g016120.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 2.6e-15 86.3 173 28.9
Solyc11g005470.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 2.6e-15 86.3 173 29.5
Solyc08g016100.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 3.4e-15 85.9 174 29.9
PGSC0003DMG400003994 Solanum tuberosum HOM05D009933 ORTHO05D012084 4.5e-15 85.5 144 35.4
Solyc08g016110.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 7.7e-15 84.7 146 30.8
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 2.9e-14 82.8 148 33.1
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 2.9e-14 82.8 170 33.5
PGSC0003DMG400038811 Solanum tuberosum HOM05D009933 ORTHO05D012084 2.9e-14 82.8 146 34.2
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 3.8e-14 82.4 153 34.0
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 5.0e-14 82.0 176 34.1
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 5.0e-14 82.0 171 29.8
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 8.5e-14 81.3 150 32.0
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.1e-13 80.9 167 34.1
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 4.2e-13 79.0 166 30.1
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 5.5e-13 78.6 156 31.4
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 9.4e-13 77.8 171 35.1
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 9.4e-13 77.8 164 30.5
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.2e-12 77.4 153 30.1
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 2.1e-12 76.6 158 32.9
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.1e-12 76.6 158 32.9
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 2.1e-12 76.6 125 32.8
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 4.7e-12 75.5 149 33.6
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.1e-12 75.1 153 28.8
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 8.0e-12 74.7 153 29.4
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.8e-11 73.6 158 32.3
Nitab4.5_0002441g0060 Nicotiana tabacum HOM05D009933 ORTHO05D012084 2.3e-11 73.2 110 32.7
CAN.G676.49 Capsicum annuum HOM05D009933 ORTHO05D012084 6.7e-11 71.6 168 26.8
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 2.0e-10 70.1 170 25.3
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.3e-10 69.3 137 32.1
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 3.3e-10 69.3 181 29.8
C05p07340 Brassica napus HOM05D013394 ORTHO05D009712 4.4e-10 68.9 152 28.9
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 4.4e-10 68.9 146 34.9
A06p06100 Brassica napus HOM05D013394 ORTHO05D009712 9.7e-10 67.8 152 28.3
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 9.7e-10 67.8 167 28.1
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 1.3e-09 67.4 157 26.1
BraA06t23823Z Brassica rapa HOM05D013394 ORTHO05D009712 1.3e-09 67.4 152 28.3
BcaC05g24789 Brassica carinata HOM05D013394 ORTHO05D009712 1.7e-09 67.0 152 28.3
BolC5t29492H Brassica oleracea HOM05D013394 ORTHO05D009712 1.7e-09 67.0 152 28.3
Glyma.09G033700 Glycine max HOM05D001578 ORTHO05D001207 3.7e-09 65.9 175 24.0
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 4.8e-09 65.5 158 31.0
Glyma.07G237500 Glycine max HOM05D001578 ORTHO05D001207 4.8e-09 65.5 175 23.4
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 4.8e-09 65.5 138 31.2
TPR.G25390 Trifolium pratense HOM05D001578 ORTHO05D001207 6.3e-09 65.1 155 25.8
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 8.2e-09 64.7 142 26.8
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 8.2e-09 64.7 177 28.2
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 8.2e-09 64.7 177 28.2
Glyma.15G138400 Glycine max HOM05D001578 ORTHO05D001207 1.1e-08 64.3 175 26.3
Psat0s740g0040 Pisum sativum HOM05D001578 ORTHO05D001207 1.1e-08 64.3 170 25.9
Psat4g021720 Pisum sativum HOM05D001578 ORTHO05D001207 1.4e-08 63.9 153 25.5
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 1.4e-08 63.9 173 27.7
Psat1g162120 Pisum sativum HOM05D001578 ORTHO05D001207 1.8e-08 63.5 168 26.8
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.4e-08 63.2 137 28.5
Lalb_Chr15g0089101 Lupinus albus HOM05D001578 ORTHO05D001207 2.4e-08 63.2 145 25.5
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 2.4e-08 63.2 162 24.7
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 2.4e-08 63.2 171 26.9
SGA_v2.0_scaffold48G17932 Striga asiatica HOM05D008339 ORTHO05D009712 3.1e-08 62.8 168 24.4
VMungo1215G0592 Vigna mungo HOM05D001578 ORTHO05D001207 4.1e-08 62.4 175 24.0
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 5.3e-08 62.0 152 26.3
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 5.3e-08 62.0 172 26.2
Medtr4g122720 Medicago truncatula HOM05D001578 ORTHO05D001207 9.1e-08 61.2 140 27.1
Phvul.006G119800 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 9.1e-08 61.2 171 23.4
COL.COLO4_34581 Corchorus olitorius HOM05D001578 ORTHO05D001207 1.2e-07 60.8 165 24.2
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 1.2e-07 60.8 166 23.5
Glyma.17G036100 Glycine max HOM05D001578 ORTHO05D001207 1.2e-07 60.8 176 22.7
Medtr4g122740 Medicago truncatula HOM05D001578 ORTHO05D001207 1.6e-07 60.5 146 25.3
VMungo0540G0744 Vigna mungo HOM05D001578 ORTHO05D001207 1.6e-07 60.5 146 24.0
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 2.0e-07 60.1 172 30.8
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 2.0e-07 60.1 132 31.1
Phvul.003G116900 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 2.0e-07 60.1 146 23.3
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 2.0e-07 60.1 141 25.5
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 2.6e-07 59.7 152 25.7
Lj4g0021583 Lotus japonicus HOM05D001578 ORTHO05D001207 4.5e-07 58.9 146 22.6
Lj6g0003953 Lotus japonicus HOM05D001578 ORTHO05D001207 7.7e-07 58.2 166 24.1
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 7.7e-07 58.2 164 23.2
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 1.0e-06 57.8 158 26.6
Potri.016G001600 Populus trichocarpa HOM05D008403 ORTHO05D010317 1.0e-06 57.8 147 23.8
Sc02g0000800 Simmondsia chinensis HOM05D009933 ORTHO05D012084 1.0e-06 57.8 185 27.0
TPR.G33864 Trifolium pratense HOM05D001578 ORTHO05D001207 1.0e-06 57.8 159 22.0
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 1.7e-06 57.0 132 30.3
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 2.2e-06 56.6 149 26.2
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 2.2e-06 56.6 149 26.2
Peaxi162Scf01623g00015 Petunia axillaris HOM05D009933 ORTHO05D012084 2.2e-06 56.6 87 35.6
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 2.9e-06 56.2 170 28.8
arahy.Tifrunner.gnm1.ann1.2R90TF Arachis hypogaea HOM05D000961 ORTHO05D001207 5.0e-06 55.5 159 26.4
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 6.5e-06 55.1 143 28.7


User provided reference genes

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