Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 6.4e-67 257.3 131 100.0
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 1.5e-55 219.5 131 85.5
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 5.1e-24 114.8 136 49.3
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.3e-22 110.2 136 47.8
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 2.0e-20 102.8 135 43.7
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 3.4e-20 102.1 137 46.7
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 5.8e-20 101.3 137 46.7
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 2.9e-19 99.0 133 43.6
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.1e-18 97.1 125 44.0
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 1.4e-18 96.7 122 45.1
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 1.9e-18 96.3 129 44.2
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.9e-18 96.3 130 46.2
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 2.5e-18 95.9 126 46.0
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 2.5e-18 95.9 126 41.3
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 2.5e-18 95.9 127 43.3
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 7.1e-18 94.4 133 42.1
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.6e-17 93.2 123 43.1
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.7e-17 92.4 136 42.6
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.6e-17 91.7 138 41.3
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 1.0e-16 90.5 144 43.1
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 1.3e-16 90.1 129 43.4
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 6.7e-16 87.8 134 45.5
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 5.7e-15 84.7 122 42.6
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 5.7e-15 84.7 122 42.6
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 7.4e-15 84.3 131 40.5
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 1.3e-14 83.6 122 41.8
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 1.3e-14 83.6 122 41.0
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.1e-14 82.8 111 45.9
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.1e-14 82.8 132 43.9
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 3.7e-14 82.0 118 42.4
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 3.7e-14 82.0 131 39.7
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 6.3e-14 81.3 131 39.7
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 8.2e-14 80.9 115 41.7
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 1.4e-13 80.1 137 35.8
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.8e-13 79.7 128 43.0
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.8e-13 79.7 131 40.5
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 2.4e-13 79.3 109 45.0
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 4.1e-13 78.6 131 43.5
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 9.0e-13 77.4 131 43.5
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 1.5e-12 76.6 109 46.8
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 1.5e-12 76.6 109 46.8
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 1.5e-12 76.6 131 38.9
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 2.0e-12 76.3 128 41.4
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 2.0e-12 76.3 121 40.5
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 2.0e-12 76.3 138 41.3
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 3.4e-12 75.5 132 40.9
Nitab4.5_0004507g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.5e-12 75.1 131 37.4
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 5.9e-12 74.7 138 37.7
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 5.9e-12 74.7 117 41.9
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.7e-11 73.2 123 39.8
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.7e-11 73.2 123 39.8
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 5.0e-11 71.6 136 39.7
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 1.9e-10 69.7 135 38.5
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 2.5e-10 69.3 145 37.2
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 3.2e-10 68.9 145 36.6
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 4.2e-10 68.6 126 42.1
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 9.3e-10 67.4 132 37.9
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 3.5e-09 65.5 123 36.6
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 6.1e-09 64.7 117 35.9
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 7.9e-09 64.3 115 36.5
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 7.9e-09 64.3 115 36.5
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 7.9e-09 64.3 123 35.8
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 7.9e-09 64.3 105 39.0
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 7.9e-09 64.3 132 35.6
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 1.0e-08 63.9 137 32.1
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 1.3e-08 63.5 114 36.8
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 1.8e-08 63.2 105 50.5
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 1.8e-08 63.2 114 36.8
Nitab4.5_0000304g0050 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.8e-08 63.2 63 47.6
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 5.1e-08 61.6 127 35.4
Nitab4.5_0000235g0170 Nicotiana tabacum HOM05D007735 ORTHO05D009638 8.7e-08 60.8 87 43.7
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 1.1e-07 60.5 117 35.9
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 1.5e-07 60.1 105 38.1
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 1.9e-07 59.7 117 32.5
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 4.3e-07 58.5 131 30.5
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 4.3e-07 58.5 106 37.7
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 7.4e-07 57.8 131 32.8
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 1.3e-06 57.0 116 34.5
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 2.2e-06 56.2 129 36.4
Atru.chr3.61 Acer truncatum HOM05D007735 ORTHO05D009638 4.8e-06 55.1 63 46.0


User provided reference genes

Program Settings