Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 1.5e-95 352.8 178 100.0
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 2.0e-87 325.9 178 91.6
Oeu060879.1 Olea europaea HOM05D009933 ORTHO05D012084 1.5e-50 203.4 174 59.2
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 1.0e-27 127.5 173 37.0
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 6.3e-25 118.2 150 39.3
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 1.4e-24 117.1 150 38.7
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 2.0e-23 113.2 153 37.3
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 4.5e-23 112.1 166 36.7
Migut.I00636 Erythranthe guttata HOM05D009933 ORTHO05D012084 1.3e-22 110.5 169 36.1
unitig_60.g25616 Utricularia gibba HOM05D009933 ORTHO05D012084 2.2e-22 109.8 167 35.3
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 8.5e-22 107.8 162 37.7
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 7.2e-21 104.8 150 37.3
Peaxi162Scf01623g00014 Petunia axillaris HOM05D009933 ORTHO05D012084 7.9e-20 101.3 169 34.3
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 1.5e-18 97.1 166 38.6
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 3.7e-17 92.4 154 32.5
Solyc08g016120.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 4.8e-17 92.0 173 31.2
PGSC0003DMG400003994 Solanum tuberosum HOM05D009933 ORTHO05D012084 4.8e-17 92.0 172 33.1
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 6.3e-17 91.7 153 36.6
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 6.3e-17 91.7 159 34.6
Solyc08g016100.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 6.3e-17 91.7 173 31.2
PGSC0003DMG400038811 Solanum tuberosum HOM05D009933 ORTHO05D012084 6.3e-17 91.7 160 33.8
Solyc08g016110.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 8.2e-17 91.3 160 31.9
PGSC0003DMG400003969 Solanum tuberosum HOM05D009933 ORTHO05D012084 1.1e-16 90.9 174 30.5
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 1.8e-16 90.1 114 43.0
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 2.4e-16 89.7 173 31.8
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 4.1e-16 89.0 148 35.1
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 4.1e-16 89.0 165 33.9
Solyc11g005470.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 5.3e-16 88.6 174 29.9
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 9.1e-16 87.8 165 33.3
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 2.0e-15 86.7 161 32.9
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 2.0e-15 86.7 179 31.3
Eucgr.E00366 Eucalyptus grandis HOM05D008339 ORTHO05D009712 2.6e-15 86.3 160 34.4
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 3.4e-15 85.9 160 33.8
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 3.4e-15 85.9 168 31.5
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 4.5e-15 85.5 148 34.5
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 5.9e-15 85.1 160 32.5
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 3.8e-14 82.4 181 31.5
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 5.0e-14 82.0 156 32.1
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.1e-13 80.9 164 34.1
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 1.4e-13 80.5 125 32.8
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 1.9e-13 80.1 170 31.8
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 2.5e-13 79.7 158 31.6
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.5e-13 79.7 158 31.6
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 3.2e-13 79.3 176 33.5
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 9.4e-13 77.8 164 29.3
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 9.4e-13 77.8 149 32.2
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 1.2e-12 77.4 156 30.8
CAN.G676.49 Capsicum annuum HOM05D009933 ORTHO05D012084 1.6e-12 77.0 168 27.4
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.1e-12 76.6 158 31.0
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 2.7e-12 76.3 167 29.3
Nitab4.5_0002441g0060 Nicotiana tabacum HOM05D009933 ORTHO05D012084 2.7e-12 76.3 110 31.8
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 4.7e-12 75.5 161 31.7
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 1.0e-11 74.3 144 34.0
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 1.4e-11 73.9 174 33.3
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.7e-11 71.6 153 27.5
SGA_v2.0_scaffold48G17932 Striga asiatica HOM05D008339 ORTHO05D009712 1.5e-10 70.5 160 24.4
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 2.6e-10 69.7 137 31.4
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.3e-10 69.3 153 26.1
Glyma.09G033700 Glycine max HOM05D001578 ORTHO05D001207 3.3e-10 69.3 175 24.6
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.4e-10 68.9 153 26.8
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 4.4e-10 68.9 172 29.1
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 1.3e-09 67.4 142 27.5
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 1.7e-09 67.0 175 22.9
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 1.7e-09 67.0 161 28.0
TPR.G25390 Trifolium pratense HOM05D001578 ORTHO05D001207 2.2e-09 66.6 155 25.8
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 3.7e-09 65.9 132 33.3
Glyma.07G237500 Glycine max HOM05D001578 ORTHO05D001207 6.3e-09 65.1 175 23.4
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.4e-08 63.9 137 29.9
C05p07340 Brassica napus HOM05D013394 ORTHO05D009712 1.8e-08 63.5 152 27.0
Phvul.006G119800 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.8e-08 63.5 175 25.1
Psat1g162120 Pisum sativum HOM05D001578 ORTHO05D001207 2.4e-08 63.2 168 26.8
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 2.4e-08 63.2 141 27.0
VMungo1215G0592 Vigna mungo HOM05D001578 ORTHO05D001207 2.4e-08 63.2 175 23.4
Glyma.15G138400 Glycine max HOM05D001578 ORTHO05D001207 3.1e-08 62.8 146 24.0
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 3.1e-08 62.8 132 32.6
Carub.0001s0870 Capsella rubella HOM05D013394 ORTHO05D009712 4.1e-08 62.4 171 23.4
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 4.1e-08 62.4 163 26.4
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 5.3e-08 62.0 172 29.1
Lalb_Chr15g0089101 Lupinus albus HOM05D001578 ORTHO05D001207 5.3e-08 62.0 145 24.8
VMungo0540G0744 Vigna mungo HOM05D001578 ORTHO05D001207 5.3e-08 62.0 171 22.2
BcaC05g24789 Brassica carinata HOM05D013394 ORTHO05D009712 7.0e-08 61.6 152 26.3
BolC5t29492H Brassica oleracea HOM05D013394 ORTHO05D009712 7.0e-08 61.6 152 26.3
Medtr4g122740 Medicago truncatula HOM05D001578 ORTHO05D001207 7.0e-08 61.6 174 25.9
Psat0s740g0040 Pisum sativum HOM05D001578 ORTHO05D001207 7.0e-08 61.6 171 22.8
Glyma.17G036100 Glycine max HOM05D001578 ORTHO05D001207 9.1e-08 61.2 182 20.9
COL.COLO4_34581 Corchorus olitorius HOM05D001578 ORTHO05D001207 1.2e-07 60.8 166 24.1
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 1.2e-07 60.8 165 26.1
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 1.6e-07 60.5 173 26.6
Peaxi162Scf01623g00015 Petunia axillaris HOM05D009933 ORTHO05D012084 2.0e-07 60.1 87 35.6
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 2.6e-07 59.7 164 24.4
Phvul.003G116900 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 2.6e-07 59.7 146 22.6
Sed0011112 Sechium edule HOM05D008339 ORTHO05D009712 4.5e-07 58.9 154 25.3
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 5.9e-07 58.5 140 24.3
Sc02g0000800 Simmondsia chinensis HOM05D009933 ORTHO05D012084 1.0e-06 57.8 178 24.7
Lj4g0021583 Lotus japonicus HOM05D001578 ORTHO05D001207 1.3e-06 57.4 146 22.6
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 2.2e-06 56.6 150 28.0
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 2.2e-06 56.6 150 28.0
Duzib052G1048 Durio zibethinus HOM05D001578 ORTHO05D001207 2.2e-06 56.6 140 24.3
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 2.9e-06 56.2 165 26.1
MELO3C004164.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.8e-06 55.8 89 34.8
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 3.8e-06 55.8 166 22.3
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 5.0e-06 55.5 169 26.6
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 5.0e-06 55.5 146 23.3
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 6.5e-06 55.1 150 28.0
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 6.5e-06 55.1 143 23.8


User provided reference genes

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