Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 6.9e-187 657.1 328 100.0
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 4.6e-130 468.4 340 73.5
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 5.0e-129 464.9 290 75.9
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 5.6e-128 461.5 330 70.6
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 4.0e-126 455.3 350 66.9
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 6.8e-126 454.5 278 76.6
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 2.0e-125 453.0 306 72.2
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 3.4e-125 452.2 337 68.2
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 9.8e-125 450.7 337 67.7
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.7e-124 449.9 314 71.3
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.2e-124 449.5 336 69.6
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 6.4e-124 448.0 292 74.0
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 4.1e-123 445.3 314 70.7
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 5.4e-123 444.9 314 71.0
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 9.2e-123 444.1 336 66.4
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 1.2e-122 443.7 334 66.8
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 6.0e-122 441.4 340 65.9
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.7e-121 439.9 339 64.9
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 3.0e-121 439.1 335 67.2
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 3.0e-121 439.1 301 72.1
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 5.0e-121 438.3 333 67.6
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 6.6e-121 438.0 334 66.2
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 8.6e-121 437.6 339 64.6
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.1e-120 437.2 314 69.1
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.1e-120 437.2 339 64.9
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.5e-120 436.8 338 64.2
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 5.6e-120 434.9 337 65.3
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 7.3e-120 434.5 291 72.5
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 9.5e-120 434.1 355 63.9
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.1e-119 433.0 338 65.1
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 2.8e-119 432.6 328 65.2
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 4.7e-119 431.8 338 63.0
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 4.7e-119 431.8 335 64.5
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 4.7e-119 431.8 338 64.2
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 1.1e-118 430.6 334 64.7
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.1e-118 430.6 360 61.9
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.1e-118 430.6 298 71.5
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.4e-118 430.3 332 65.7
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 1.4e-118 430.3 337 63.5
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.3e-118 429.5 330 63.9
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 4.0e-118 428.7 332 65.4
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 5.2e-118 428.3 302 68.2
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 5.2e-118 428.3 333 66.1
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 5.2e-118 428.3 330 66.4
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 8.9e-118 427.6 342 62.3
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 1.2e-117 427.2 348 63.8
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 4.4e-117 425.2 333 64.0
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 5.8e-117 424.9 323 64.4
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 9.8e-117 424.1 361 62.6
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 9.8e-117 424.1 335 64.2
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.7e-116 423.3 333 63.4
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 2.2e-116 422.9 323 66.3
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 2.9e-116 422.5 331 64.7
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 4.9e-116 421.8 217 100.0
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 4.9e-116 421.8 340 62.4
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 8.3e-116 421.0 337 64.4
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 8.3e-116 421.0 346 65.9
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 8.3e-116 421.0 333 65.2
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.4e-115 420.2 330 63.6
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.9e-115 419.9 342 63.7
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 1.9e-115 419.9 299 70.6
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 3.2e-115 419.1 338 61.8
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.2e-115 419.1 288 71.2
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 2.1e-114 416.4 343 64.1
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 3.5e-114 415.6 308 67.5
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 7.8e-114 414.5 338 61.8
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 7.8e-114 414.5 337 62.9
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 2.3e-113 412.9 343 62.1
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 5.1e-113 411.8 342 61.7
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 5.1e-113 411.8 309 67.0
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 1.9e-112 409.8 341 60.1
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 7.3e-112 407.9 341 60.1
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 9.5e-112 407.5 304 67.1
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 6.2e-111 404.8 342 59.9
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.4e-110 403.7 342 61.7
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 6.8e-110 401.4 343 61.5
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 8.9e-110 401.0 343 61.5
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 8.4e-108 394.4 215 86.0
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.1e-107 391.3 291 67.7
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 7.1e-107 391.3 338 59.5
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.6e-106 390.2 342 60.5
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 2.7e-106 389.4 339 59.9
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 7.8e-106 387.9 348 57.8
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 1.7e-105 386.7 309 65.4
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 2.3e-105 386.3 342 60.2
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 3.0e-105 386.0 321 61.4
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.5e-104 383.6 343 60.3
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.5e-104 383.6 343 60.3
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 5.6e-104 381.7 297 64.6
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 3.6e-103 379.0 282 65.2
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 4.7e-103 378.6 358 57.5
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.4e-102 377.1 242 74.4
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 1.8e-102 376.7 264 67.8
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 9.3e-99 364.4 303 58.4
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 2.5e-96 356.3 264 66.3
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 3.3e-96 355.9 316 60.1
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 2.8e-95 352.8 232 70.7
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 3.8e-92 342.4 348 54.9
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 8.4e-92 341.3 272 64.0
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 3.3e-88 329.3 329 52.3
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 1.3e-79 300.8 337 49.3
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.8e-79 299.7 241 63.1
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 5.7e-72 275.4 277 49.1
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.1e-70 269.2 222 67.1
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 9.0e-70 268.1 278 47.8
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 7.9e-66 255.0 203 61.6
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 1.0e-65 254.6 296 45.3
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 1.3e-65 254.2 228 50.0
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 2.5e-64 250.0 177 70.1
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 6.5e-60 235.3 297 45.5
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 5.7e-56 222.2 252 40.5
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.6e-50 203.0 268 42.9
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 2.8e-47 193.4 154 59.7
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.8e-46 190.7 304 38.5
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 2.3e-41 173.7 180 58.9
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 1.7e-31 141.0 106 59.4
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.4e-24 116.7 143 49.0
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 1.2e-16 91.7 149 40.9
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 7.5e-16 89.0 159 40.9
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 1.5e-08 64.7 101 40.6
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 2.0e-08 64.3 37 75.7
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 2.6e-08 63.9 38 71.1


User provided reference genes

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