Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043291.1 Olea europaea HOM05D005532 ORTHO05D006873 3.9e-243 844.3 424 100.0
Dinv36220 Davidia involucrata HOM05D005532 ORTHO05D006873 6.6e-198 694.1 424 81.6
Migut.D00633 Erythranthe guttata HOM05D005532 ORTHO05D006873 2.1e-196 689.1 419 80.9
GSVIVG01031546001 Vitis vinifera HOM05D005532 ORTHO05D006873 4.4e-194 681.4 424 79.0
Nitab4.5_0011829g0040 Nicotiana tabacum HOM05D005532 ORTHO05D006873 2.2e-193 679.1 411 81.3
SGA_v2.0_scaffold29G12299 Striga asiatica HOM05D005532 ORTHO05D006873 6.4e-193 677.6 420 78.3
TAR636G1137 Trochodendron aralioides HOM05D005532 ORTHO05D006873 4.1e-192 674.9 406 80.8
Potri.009G050100 Populus trichocarpa HOM05D005532 ORTHO05D006873 9.2e-192 673.7 412 80.3
Thecc.09G240600 Theobroma cacao HOM05D005532 ORTHO05D006873 7.8e-191 670.6 419 78.3
CSS0007885 Camellia sinensis var. sinensis HOM05D005532 ORTHO05D006873 1.3e-190 669.8 406 80.3
Duzib168G1386 Durio zibethinus HOM05D005532 ORTHO05D006873 2.3e-190 669.1 419 78.3
PGSC0003DMG400038188 Solanum tuberosum HOM05D005532 ORTHO05D006873 2.3e-190 669.1 404 79.7
Cpa.g.sc892.3 Carica papaya HOM05D005532 ORTHO05D006873 8.6e-190 667.2 419 76.8
Sopen11g024960 Solanum pennellii HOM05D005532 ORTHO05D006873 8.6e-190 667.2 404 79.7
Actinidia23981 Actinidia chinensis HOM05D005532 ORTHO05D006873 1.5e-189 666.4 407 79.9
Actinidia11667 Actinidia chinensis HOM05D005532 ORTHO05D006873 3.3e-189 665.2 406 80.5
unitig_52.g16880 Utricularia gibba HOM05D005532 ORTHO05D006873 3.3e-189 665.2 408 78.4
Manes.14G005300 Manihot esculenta HOM05D005532 ORTHO05D006873 7.3e-189 664.1 402 79.4
Solyc11g065240.2 Solanum lycopersicum HOM05D005532 ORTHO05D006873 9.5e-189 663.7 412 78.2
CAN.G870.1 Capsicum annuum HOM05D005532 ORTHO05D006873 8.1e-188 660.6 404 79.2
Gorai.001G136900 Gossypium raimondii HOM05D005532 ORTHO05D006873 1.8e-187 659.4 417 76.5
Gohir.D07G126700 Gossypium hirsutum HOM05D005532 ORTHO05D006873 1.2e-186 656.8 417 76.0
TWI60G0905 Tripterygium wilfordii HOM05D005532 ORTHO05D006873 2.6e-186 655.6 419 77.3
MD11G1188300 Malus domestica HOM05D005532 ORTHO05D006873 3.4e-186 655.2 423 76.6
Prupe.4G256000 Prunus persica HOM05D005532 ORTHO05D006873 3.4e-186 655.2 422 77.0
Nn7g36397 Nelumbo nucifera HOM05D005532 ORTHO05D006873 4.4e-186 654.8 425 77.2
RhsimUnG0131400 Rhododendron simsii HOM05D005532 ORTHO05D006873 4.4e-186 654.8 430 77.4
Eucgr.J00735 Eucalyptus grandis HOM05D005532 ORTHO05D006873 1.7e-185 652.9 414 76.8
Lj1A319T38 Lonicera japonica HOM05D005532 ORTHO05D006873 1.7e-185 652.9 462 72.3
Rhsim01G0193400 Rhododendron simsii HOM05D005532 ORTHO05D006873 6.4e-185 651.0 440 75.2
CiPaw.13G154000 Carya illinoinensis HOM05D005532 ORTHO05D006873 3.2e-184 648.7 414 77.3
Cc01_g02130 Coffea canephora HOM05D005532 ORTHO05D006873 5.4e-184 647.9 392 80.9
Glyma.12G021500 Glycine max HOM05D005532 ORTHO05D006873 2.7e-183 645.6 400 78.2
Medtr4g076230 Medicago truncatula HOM05D005532 ORTHO05D006873 3.5e-183 645.2 404 77.5
arahy.Tifrunner.gnm1.ann1.3FY9NR Arachis hypogaea HOM05D005532 ORTHO05D006873 6.0e-183 644.4 425 74.1
CANSAT54G2729 Cannabis sativa HOM05D005532 ORTHO05D006873 7.8e-183 644.0 403 76.2
Atru.chr3.2637 Acer truncatum HOM05D005532 ORTHO05D006873 1.0e-182 643.7 415 77.1
COL.COLO4_36473 Corchorus olitorius HOM05D005532 ORTHO05D006873 1.0e-182 643.7 400 78.2
PGR119G0320 Punica granatum HOM05D005532 ORTHO05D006873 5.1e-182 641.3 410 76.8
TPR.G22568 Trifolium pratense HOM05D005532 ORTHO05D006873 8.7e-182 640.6 405 76.5
Lj3g0021729 Lotus japonicus HOM05D005532 ORTHO05D006873 3.3e-181 638.6 398 76.6
arahy.Tifrunner.gnm1.ann1.7Y4SN4 Arachis hypogaea HOM05D005532 ORTHO05D006873 5.6e-181 637.9 425 73.6
Phvul.011G078100 Phaseolus vulgaris HOM05D005532 ORTHO05D006873 5.6e-181 637.9 400 77.8
Ciclev10015321m.g Citrus clementina HOM05D005532 ORTHO05D006873 7.3e-181 637.5 423 74.9
Aqoxy2G00249 Aquilegia oxysepala HOM05D005532 ORTHO05D006873 2.1e-180 636.0 423 72.3
HanXRQChr13g0401441 Helianthus annuus HOM05D005532 ORTHO05D006873 6.2e-180 634.4 392 77.6
Lalb_Chr19g0139721 Lupinus albus HOM05D005532 ORTHO05D006873 1.1e-179 633.6 400 76.5
RcHm_v2.0_Chr5g0053381 Rosa chinensis HOM05D005532 ORTHO05D006873 1.8e-179 632.9 409 75.6
PSO339G2797 Papaver somniferum HOM05D005532 ORTHO05D006873 2.4e-179 632.5 429 73.4
MELO3C014575.2 Cucumis melo HOM05D005532 ORTHO05D006873 9.0e-179 630.6 400 75.8
FvH4_3g28350 Fragaria vesca HOM05D005532 ORTHO05D006873 1.5e-178 629.8 402 75.6
FAN25G0557 Fragaria x ananassa HOM05D005532 ORTHO05D006873 2.6e-178 629.0 401 75.8
HanXRQChr02g0051521 Helianthus annuus HOM05D005532 ORTHO05D006873 5.8e-178 627.9 398 76.4
Lsat_1_v5_gn_6_26061 Lactuca sativa HOM05D005532 ORTHO05D006873 5.8e-178 627.9 397 75.1
FAN16G3415 Fragaria x ananassa HOM05D005532 ORTHO05D006873 1.3e-177 626.7 401 75.6
ECA233G0258 Erigeron canadensis HOM05D005532 ORTHO05D006873 2.2e-177 625.9 392 77.0
Sed0019503 Sechium edule HOM05D005532 ORTHO05D006873 1.1e-176 623.6 400 74.2
THA.LOC104821584 Tarenaya hassleriana HOM05D005532 ORTHO05D006873 1.1e-176 623.6 392 76.0
Nitab4.5_0005230g0080 Nicotiana tabacum HOM05D005532 ORTHO05D006873 1.4e-176 623.2 411 76.9
PSO384G4693 Papaver somniferum HOM05D005532 ORTHO05D006873 1.4e-176 623.2 427 73.1
Psat7g179480 Pisum sativum HOM05D005532 ORTHO05D006873 1.9e-176 622.9 436 71.1
Thhalv10011503m.g Eutrema salsugineum HOM05D005532 ORTHO05D006873 1.6e-175 619.8 400 75.0
AL1G58090 Arabidopsis lyrata HOM05D005532 ORTHO05D006873 3.5e-175 618.6 423 72.1
Haze_23183 Corylus avellana HOM05D005532 ORTHO05D006873 4.6e-175 618.2 457 69.1
FAN21G2390 Fragaria x ananassa HOM05D005532 ORTHO05D006873 4.6e-175 618.2 401 74.3
Sp1g37280 Schrenkiella parvula HOM05D005532 ORTHO05D006873 1.0e-174 617.1 400 74.5
AT1G50450 Arabidopsis thaliana HOM05D005532 ORTHO05D006873 1.3e-174 616.7 423 71.9
BcaC08g43214 Brassica carinata HOM05D005532 ORTHO05D006873 6.6e-174 614.4 400 74.2
Carub.0001s3953 Capsella rubella HOM05D005532 ORTHO05D006873 1.5e-173 613.2 423 71.6
BcaB07g33482 Brassica carinata HOM05D005532 ORTHO05D006873 1.9e-173 612.8 400 74.0
Hund07456 Selenicereus undatus HOM05D005532 ORTHO05D006873 9.6e-173 610.5 420 71.7
VMungo1127G1594 Vigna mungo HOM05D005532 ORTHO05D006873 4.8e-172 608.2 391 77.2
Cfa009820 Carpinus fangiana HOM05D005532 ORTHO05D006873 1.8e-171 606.3 386 76.9
A06p03120 Brassica napus HOM05D005532 ORTHO05D006873 1.3e-169 600.1 400 73.5
BraA06t23525Z Brassica rapa HOM05D005532 ORTHO05D006873 1.3e-169 600.1 400 73.5
EL10Ac4g10189 Beta vulgaris HOM05D005532 ORTHO05D006873 2.9e-169 599.0 436 69.5
C06p05640 Brassica napus HOM05D005532 ORTHO05D006873 3.2e-168 595.5 400 73.0
BolC6t35671H Brassica oleracea HOM05D005532 ORTHO05D006873 3.2e-168 595.5 400 73.0
vmacro14267 Vaccinium macrocarpon HOM05D005532 ORTHO05D006873 3.9e-166 588.6 560 58.8
Sabra09G0036700 Salix brachista HOM05D005532 ORTHO05D006873 5.1e-166 588.2 366 79.0
Aa31LG10G3830 Aethionema arabicum HOM05D005532 ORTHO05D006873 5.6e-165 584.7 402 72.6
Os12g0137200 Oryza sativa ssp. japonica HOM05D005532 ORTHO05D006873 1.8e-163 579.7 392 71.2
Zm00001eb093270 Zea mays HOM05D005532 ORTHO05D006873 4.5e-162 575.1 393 71.8
CDE04G2597 Ceratophyllum demersum HOM05D005532 ORTHO05D006873 9.9e-162 573.9 395 70.1
Glyma.11G095400 Glycine max HOM05D005532 ORTHO05D006873 2.9e-161 572.4 354 79.4
arahy.Tifrunner.gnm1.ann1.PT8LN6 Arachis hypogaea HOM05D005532 ORTHO05D006873 5.5e-160 568.2 401 68.1
HPP92_011271 Vanilla planifolia HOM05D005532 ORTHO05D006873 9.3e-160 567.4 387 69.8
ClCG02G023050 Citrullus lanatus HOM05D005532 ORTHO05D006873 1.6e-159 566.6 433 66.7
AUR62000162 Chenopodium quinoa HOM05D005532 ORTHO05D006873 2.1e-159 566.2 376 74.2
Peaxi162Scf00004g00378 Petunia axillaris HOM05D005532 ORTHO05D006873 7.9e-159 564.3 404 71.3
AUR62039849 Chenopodium quinoa HOM05D005532 ORTHO05D006873 3.0e-158 562.4 377 74.0
DCAR_023774 Daucus carota HOM05D005532 ORTHO05D006873 2.1e-156 556.2 424 66.3
Hma1.2p1_2169F.1_g315920 Hydrangea macrophylla HOM05D005532 ORTHO05D006873 2.9e-153 545.8 331 79.8
Hund07457 Selenicereus undatus HOM05D005532 ORTHO05D006873 8.2e-148 527.7 383 68.4
Aa31LG10G3840 Aethionema arabicum HOM05D005532 ORTHO05D006873 1.4e-147 526.9 394 64.2
Haze_23184 Corylus avellana HOM05D005532 ORTHO05D006873 3.1e-147 525.8 385 70.1
Gohir.A07G122800 Gossypium hirsutum HOM05D005532 ORTHO05D006873 1.0e-142 510.8 326 77.0
Lsat_1_v5_gn_6_26080 Lactuca sativa HOM05D005532 ORTHO05D006873 1.4e-142 510.4 378 64.8
Mapoly0066s0102 Marchantia polymorpha HOM05D005532 ORTHO05D006873 1.8e-142 510.0 396 60.6
HPP92_011292 Vanilla planifolia HOM05D005532 ORTHO05D006873 3.0e-142 509.2 344 70.6
AagrBONN_evm.TU.Sc2ySwM_117.1967 Anthoceros agrestis HOM05D005532 ORTHO05D006873 1.7e-140 503.4 381 63.5
AUR62039851 Chenopodium quinoa HOM05D005532 ORTHO05D006873 4.1e-139 498.8 338 69.8
unitig_62.g23891 Utricularia gibba HOM05D005532 ORTHO05D006873 7.9e-135 484.6 334 71.0
Ah.04g162030 Amaranthus hybridus HOM05D005532 ORTHO05D006873 7.0e-131 471.5 377 64.5
Sc09g0000860 Simmondsia chinensis HOM05D005532 ORTHO05D006873 4.4e-125 452.2 332 70.8
QL01p018283 Quercus lobata HOM05D005532 ORTHO05D006873 1.9e-120 436.8 324 69.1
SMO367G1041 Selaginella moellendorffii HOM05D005532 ORTHO05D006873 1.1e-115 421.0 377 53.6
CsaV3_6G039150 Cucumis sativus L. HOM05D005532 ORTHO05D006873 1.7e-113 413.7 264 75.8
Sc09g0000870 Simmondsia chinensis HOM05D005532 ORTHO05D006873 1.2e-111 407.5 298 70.8
CARHR040460 Cardamine hirsuta HOM05D005532 ORTHO05D006873 2.7e-106 389.8 277 70.0
Pp3c19_6050 Physcomitrium patens HOM05D005532 ORTHO05D006873 1.0e-102 377.9 319 59.9
MBI05_g22559_MAGBIO Magnolia biondii HOM05D005532 ORTHO05D006873 2.3e-102 376.7 319 61.8
Cre16.g666050 Chlamydomonas reinhardtii HOM05D005532 ORTHO05D006873 4.1e-99 365.9 410 47.3
ATR0721G047 Amborella trichopoda HOM05D005532 ORTHO05D006873 1.9e-96 357.1 228 75.9
SGA_v2.0_scaffold29G12269 Striga asiatica HOM05D005532 ORTHO05D006873 1.2e-95 354.4 383 48.3
MCO10G311 Micromonas commoda HOM05D005532 ORTHO05D006873 1.9e-91 340.5 399 45.4
Migut.D00646 Erythranthe guttata HOM05D005532 ORTHO05D006873 2.0e-69 267.3 261 53.6
arahy.Tifrunner.gnm1.ann1.E0YEAW Arachis hypogaea HOM05D005532 ORTHO05D006873 7.1e-67 258.8 229 61.6
arahy.Tifrunner.gnm1.ann1.MM015B Arachis hypogaea HOM05D005532 ORTHO05D006873 4.3e-64 249.6 170 67.1
SalBow6G6953 Salvia bowleyana HOM05D005532 ORTHO05D006873 2.8e-63 246.9 172 73.8
arahy.Tifrunner.gnm1.ann1.C2XCQ2 Arachis hypogaea HOM05D005532 ORTHO05D006873 1.9e-59 234.2 171 68.4
CsaV3_6G039160 Cucumis sativus L. HOM05D005532 ORTHO05D006873 6.9e-54 215.7 129 77.5
PRCOL_00003498 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 2.6e-53 213.8 339 35.7
CSS0040461 Camellia sinensis var. sinensis HOM05D005532 ORTHO05D006873 1.8e-49 201.1 122 77.0
CBR_g3868 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-45 186.4 167 55.7
Ciclev10017011m.g Citrus clementina HOM05D005532 ORTHO05D006873 2.4e-38 164.1 142 61.3
TPR.G22569 Trifolium pratense HOM05D005532 ORTHO05D006873 5.3e-30 136.3 111 64.0
Hma1.2p1_2169F.1_g315910 Hydrangea macrophylla HOM05D005532 ORTHO05D006873 7.7e-29 132.5 99 68.7
PRCOL_00002357 Prasinoderma coloniale HOM05D005532 ORTHO05D006873 9.4e-27 125.6 416 28.4
SEGI_01123 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 7.9e-26 122.5 95 66.3
HanXRQChr09g0270661 Helianthus annuus HOM05D000715 ORTHO05D000024 1.4e-25 121.7 84 67.9
SEGI_35247 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 4.2e-19 100.1 64 70.3
SEGI_01014 Sequoiadendron giganteum HOM05D005532 ORTHO05D006873 1.7e-15 88.2 69 60.9
Zm00001eb093260 Zea mays HOM05D005990 ORTHO05D007908 1.1e-14 85.5 69 60.9
Os11g0140700 Oryza sativa ssp. japonica HOM05D005532 ORTHO05D006873 1.7e-12 78.2 62 61.3
unitig_62.g23890 Utricularia gibba HOM05D005532 ORTHO05D006873 6.5e-12 76.3 60 65.0
HanXRQChr13g0403791 Helianthus annuus HOM05D005532 ORTHO05D006873 2.5e-11 74.3 49 67.3
GSVIVG01003967001 Vitis vinifera HOM05D003363 ORTHO05D003952 2.0e-08 64.7 51 56.9
ATR0721G059 Amborella trichopoda HOM05D005532 ORTHO05D006873 1.7e-07 61.6 56 57.1
AUR62039850 Chenopodium quinoa HOM05D005532 ORTHO05D006873 4.8e-07 60.1 40 72.5


User provided reference genes

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