Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043290.1 Olea europaea HOM05D007217 ORTHO05D009092 1.1e-84 316.6 163 100.0
MSTRG.12451 Avicennia marina HOM05D007217 ORTHO05D009092 8.3e-40 167.5 135 60.7
SGA_v2.0_scaffold3G01474 Striga asiatica HOM05D007217 ORTHO05D009092 4.2e-36 155.2 117 63.2
Migut.N02356 Erythranthe guttata HOM05D007217 ORTHO05D009092 2.7e-35 152.5 117 62.4
Peaxi162Scf00586g00008 Petunia axillaris HOM05D007217 ORTHO05D009092 5.2e-34 148.3 122 59.0
Sopen01g003160 Solanum pennellii HOM05D007217 ORTHO05D009092 4.4e-33 145.2 126 57.9
PGSC0003DMG400021318 Solanum tuberosum HOM05D007217 ORTHO05D009092 7.5e-33 144.4 126 57.9
Solyc01g007180.3 Solanum lycopersicum HOM05D007217 ORTHO05D009092 1.3e-32 143.7 126 57.9
SalBow8G5173 Salvia bowleyana HOM05D007217 ORTHO05D009092 7.2e-28 127.9 116 56.0
unitig_749.g13716 Utricularia gibba HOM05D007217 ORTHO05D009092 1.2e-27 127.1 117 51.3
Rhsim09G0182200 Rhododendron simsii HOM05D007217 ORTHO05D009092 2.8e-27 125.9 125 53.6
Rhsim02G0191400 Rhododendron simsii HOM05D007217 ORTHO05D009092 3.6e-27 125.6 125 53.6
Dinv20263 Davidia involucrata HOM05D007217 ORTHO05D009092 1.8e-26 123.2 125 50.4
MELO3C022720.2 Cucumis melo HOM05D007217 ORTHO05D009092 2.8e-24 115.9 126 49.2
MELO3C015565.2 Cucumis melo HOM05D007217 ORTHO05D009092 6.3e-24 114.8 127 48.8
CsaV3_3G030060 Cucumis sativus L. HOM05D007217 ORTHO05D009092 6.3e-24 114.8 117 53.0
Cc01_g06080 Coffea canephora HOM05D007217 ORTHO05D009092 2.4e-23 112.8 110 57.3
Rhsim04G0112200 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.2e-22 110.5 157 43.3
ClCG07G002120 Citrullus lanatus HOM05D007217 ORTHO05D009092 1.6e-22 110.2 118 50.8
Nitab4.5_0002858g0010 Nicotiana tabacum HOM05D007217 ORTHO05D009092 2.7e-22 109.4 96 59.4
GSVIVG01019606001 Vitis vinifera HOM05D007217 ORTHO05D009092 3.5e-22 109.0 124 48.4
CsaV3_4G011770 Cucumis sativus L. HOM05D007217 ORTHO05D009092 5.9e-22 108.2 126 46.8
Cpa.g.sc64.50 Carica papaya HOM05D007217 ORTHO05D009092 2.9e-21 105.9 112 51.8
Nitab4.5_0004758g0070 Nicotiana tabacum HOM05D007217 ORTHO05D009092 3.9e-21 105.5 125 48.0
Lsat_1_v5_gn_4_36120 Lactuca sativa HOM05D007217 ORTHO05D009092 4.3e-20 102.1 112 48.2
Sc06g0009730 Simmondsia chinensis HOM05D007217 ORTHO05D009092 7.3e-20 101.3 122 50.0
Sed0002565 Sechium edule HOM05D007217 ORTHO05D009092 2.1e-19 99.8 114 46.5
Dinv01436 Davidia involucrata HOM05D007217 ORTHO05D009092 4.7e-19 98.6 96 55.2
QL05p062902 Quercus lobata HOM05D007217 ORTHO05D009092 6.1e-19 98.2 110 50.9
DCAR_001337 Daucus carota HOM05D007217 ORTHO05D009092 8.0e-19 97.8 126 43.7
CiPaw.10G112300 Carya illinoinensis HOM05D007217 ORTHO05D009092 1.8e-18 96.7 118 48.3
MD10G1238500 Malus domestica HOM05D007217 ORTHO05D009092 2.3e-18 96.3 113 46.0
Rhsim05G0134700 Rhododendron simsii HOM05D007217 ORTHO05D009092 2.3e-18 96.3 114 49.1
MD05G1258900 Malus domestica HOM05D007217 ORTHO05D009092 3.1e-18 95.9 113 46.9
Prupe.4G105800 Prunus persica HOM05D007217 ORTHO05D009092 3.1e-18 95.9 104 50.0
RcHm_v2.0_Chr5g0019241 Rosa chinensis HOM05D007217 ORTHO05D009092 3.1e-18 95.9 105 52.4
Nn7g37971 Nelumbo nucifera HOM05D007217 ORTHO05D009092 6.8e-18 94.7 124 44.4
THA.LOC104808222 Tarenaya hassleriana HOM05D007217 ORTHO05D009092 8.9e-18 94.4 124 48.4
Ciclev10018165m.g Citrus clementina HOM05D007217 ORTHO05D009092 1.2e-17 94.0 151 39.7
Sabra01G0058500 Salix brachista HOM05D007217 ORTHO05D009092 1.5e-17 93.6 120 47.5
Lsat_1_v5_gn_7_8820 Lactuca sativa HOM05D007217 ORTHO05D009092 2.0e-17 93.2 118 45.8
Manes.02G204000 Manihot esculenta HOM05D007217 ORTHO05D009092 2.0e-17 93.2 124 46.8
EL10Ac9g22805 Beta vulgaris HOM05D007217 ORTHO05D009092 4.4e-17 92.0 100 48.0
Atru.chr10.619 Acer truncatum HOM05D007217 ORTHO05D009092 5.8e-17 91.7 125 46.4
Potri.001G081300 Populus trichocarpa HOM05D007217 ORTHO05D009092 1.3e-16 90.5 120 45.8
Thecc.06G135800 Theobroma cacao HOM05D007217 ORTHO05D009092 1.3e-16 90.5 118 47.5
Ciclev10029535m.g Citrus clementina HOM05D007217 ORTHO05D009092 1.7e-16 90.1 79 55.7
DCAR_031675 Daucus carota HOM05D007217 ORTHO05D009092 2.2e-16 89.7 126 40.5
TWI09G0397 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 2.9e-16 89.4 118 44.9
Duzib235G1460 Durio zibethinus HOM05D007217 ORTHO05D009092 4.9e-16 88.6 112 46.4
FvH4_3g11820 Fragaria vesca HOM05D007217 ORTHO05D009092 6.4e-16 88.2 105 46.7
Eucgr.E04359 Eucalyptus grandis HOM05D007217 ORTHO05D009092 8.3e-16 87.8 111 46.8
HanXRQChr04g0107331 Helianthus annuus HOM05D007217 ORTHO05D009092 8.3e-16 87.8 132 39.4
Potri.003G149100 Populus trichocarpa HOM05D007217 ORTHO05D009092 1.1e-15 87.4 115 48.7
TWI09G0788 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 1.1e-15 87.4 118 44.1
MBI18_g37406_MAGBIO Magnolia biondii HOM05D007217 ORTHO05D009092 1.4e-15 87.0 112 46.4
TAR722G0002 Trochodendron aralioides HOM05D007217 ORTHO05D009092 2.4e-15 86.3 145 41.4
Gohir.D06G146500 Gossypium hirsutum HOM05D007217 ORTHO05D009092 3.2e-15 85.9 119 45.4
Gorai.010G170900 Gossypium raimondii HOM05D007217 ORTHO05D009092 5.4e-15 85.1 116 44.0
Gohir.A06G140100 Gossypium hirsutum HOM05D007217 ORTHO05D009092 7.0e-15 84.7 119 45.4
Eucgr.E02022 Eucalyptus grandis HOM05D007217 ORTHO05D009092 9.2e-15 84.3 101 47.5
Gohir.D10G048000 Gossypium hirsutum HOM05D007217 ORTHO05D009092 2.0e-14 83.2 109 45.9
Aa31LG4G550 Aethionema arabicum HOM05D002649 ORTHO05D002838 2.7e-14 82.8 117 41.9
Gohir.A10G046700 Gossypium hirsutum HOM05D007217 ORTHO05D009092 3.5e-14 82.4 78 56.4
Gorai.011G051100 Gossypium raimondii HOM05D007217 ORTHO05D009092 3.5e-14 82.4 77 55.8
AUR62017567 Chenopodium quinoa HOM05D007217 ORTHO05D009092 4.6e-14 82.0 81 48.1
Sp1g21760 Schrenkiella parvula HOM05D007217 ORTHO05D009092 4.6e-14 82.0 120 43.3
AT1G80245 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 1.3e-13 80.5 119 38.7
CARHR074240 Cardamine hirsuta HOM05D007217 ORTHO05D009092 1.7e-13 80.1 126 37.3
FAN21G1503 Fragaria x ananassa HOM05D007217 ORTHO05D009092 3.9e-13 79.0 97 47.4
Psat0s5329g0080 Pisum sativum HOM05D007217 ORTHO05D009092 6.6e-13 78.2 65 55.4
Phvul.008G108200 Phaseolus vulgaris HOM05D007217 ORTHO05D009092 1.1e-12 77.4 86 51.2
Medtr8g011490 Medicago truncatula HOM05D007217 ORTHO05D009092 1.9e-12 76.6 106 44.3
AL2G41250 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 2.5e-12 76.3 125 37.6
BcaC03g15989 Brassica carinata HOM05D007217 ORTHO05D009092 5.6e-12 75.1 119 38.7
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 9.5e-12 74.3 118 38.1
VMungo1383G0797 Vigna mungo HOM05D007217 ORTHO05D009092 9.5e-12 74.3 83 49.4
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 1.2e-11 73.9 120 36.7
Lj5g0013157 Lotus japonicus HOM05D007217 ORTHO05D009092 1.2e-11 73.9 100 45.0
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 1.6e-11 73.6 120 37.5
FAN16G2896 Fragaria x ananassa HOM05D007217 ORTHO05D009092 2.1e-11 73.2 97 45.4
Sp5g35560 Schrenkiella parvula HOM05D007217 ORTHO05D009092 2.8e-11 72.8 116 37.9
Lj6g0006317 Lotus japonicus HOM05D007217 ORTHO05D009092 3.6e-11 72.4 86 48.8
Glyma.08G176100 Glycine max HOM05D007217 ORTHO05D009092 6.2e-11 71.6 83 48.2
Glyma.15G250400 Glycine max HOM05D007217 ORTHO05D009092 6.2e-11 71.6 83 48.2
Carub.0007s3329 Capsella rubella HOM05D007217 ORTHO05D009092 8.0e-11 71.2 118 39.0
COL.COLO4_30930 Corchorus olitorius HOM05D007217 ORTHO05D009092 8.0e-11 71.2 53 66.0
Lalb_Chr16g0392431 Lupinus albus HOM05D007217 ORTHO05D009092 1.1e-10 70.9 106 39.6
Hma1.2p1_0074F.1_g039010 Hydrangea macrophylla HOM05D007217 ORTHO05D009092 1.4e-10 70.5 96 38.5
arahy.Tifrunner.gnm1.ann1.Z0SJI2 Arachis hypogaea HOM05D007217 ORTHO05D009092 2.3e-10 69.7 64 51.6
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 2.3e-10 69.7 119 37.0
AT4G00695 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 5.2e-10 68.6 119 38.7
arahy.Tifrunner.gnm1.ann1.TIKV1F Arachis hypogaea HOM05D007217 ORTHO05D009092 5.2e-10 68.6 64 53.1
arahy.Tifrunner.gnm1.ann1.3NP1QY Arachis hypogaea HOM05D007217 ORTHO05D009092 6.8e-10 68.2 64 53.1
AL7G47090 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 8.9e-10 67.8 126 38.9
HPP92_002517 Vanilla planifolia HOM05D007217 ORTHO05D009092 4.4e-09 65.5 98 38.8
HPP92_002534 Vanilla planifolia HOM05D007217 ORTHO05D009092 4.4e-09 65.5 95 41.1
Hund24191 Selenicereus undatus HOM05D007217 ORTHO05D009092 1.7e-08 63.5 59 47.5
Psat4g125640 Pisum sativum HOM05D007217 ORTHO05D009092 3.7e-08 62.4 98 36.7
Thhalv10019705m.g Eutrema salsugineum HOM05D007217 ORTHO05D009092 4.1e-07 58.9 97 38.1
GSVIVG01013634001 Vitis vinifera HOM05D007217 ORTHO05D009092 5.4e-07 58.5 97 40.2
Actinidia38172 Actinidia chinensis HOM05D007217 ORTHO05D009092 1.6e-06 57.0 69 44.9


User provided reference genes

Program Settings