Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043174.1 Olea europaea HOM05D004070 ORTHO05D004904 0.0e+00 1468.8 718 100.0
Migut.F00635 Erythranthe guttata HOM05D004070 ORTHO05D004904 2.3e-288 995.3 724 67.7
MSTRG.8925 Avicennia marina HOM05D004070 ORTHO05D004904 5.8e-287 990.7 715 68.5
SalBow3G2100 Salvia bowleyana HOM05D004070 ORTHO05D004904 5.1e-283 977.6 718 67.1
SalBow3G0248 Salvia bowleyana HOM05D004070 ORTHO05D004904 1.9e-282 975.7 718 66.9
SGA_v2.0_scaffold60G20962 Striga asiatica HOM05D004070 ORTHO05D004904 2.0e-279 965.7 720 66.2
Dinv10587 Davidia involucrata HOM05D004070 ORTHO05D004904 2.3e-275 952.2 716 65.8
Peaxi162Scf00284g00526 Petunia axillaris HOM05D004070 ORTHO05D004904 8.6e-275 950.3 711 65.1
Nitab4.5_0000058g0090 Nicotiana tabacum HOM05D004070 ORTHO05D004904 3.3e-274 948.3 711 65.1
TAR623G0471 Trochodendron aralioides HOM05D004070 ORTHO05D004904 2.1e-273 945.7 731 65.3
Nitab4.5_0003710g0040 Nicotiana tabacum HOM05D004070 ORTHO05D004904 2.8e-273 945.3 727 64.0
Sopen06g016660 Solanum pennellii HOM05D004070 ORTHO05D004904 1.3e-270 936.4 721 63.5
Solyc06g050930.3 Solanum lycopersicum HOM05D004070 ORTHO05D004904 3.8e-270 934.9 727 63.0
Duzib128G0764 Durio zibethinus HOM05D004070 ORTHO05D004904 4.6e-268 927.9 710 64.8
CAN.G19.7 Capsicum annuum HOM05D004070 ORTHO05D004904 3.9e-267 924.9 726 63.5
vmacro06948 Vaccinium macrocarpon HOM05D004070 ORTHO05D004904 1.1e-264 916.8 755 60.9
Ciclev10030777m.g Citrus clementina HOM05D004070 ORTHO05D004904 6.9e-264 914.1 727 63.1
Thecc.10G010900 Theobroma cacao HOM05D004070 ORTHO05D004904 6.9e-264 914.1 705 63.8
Lj1A961T78 Lonicera japonica HOM05D004070 ORTHO05D004904 1.2e-263 913.3 754 60.5
Potri.010G184200 Populus trichocarpa HOM05D004070 ORTHO05D004904 2.0e-263 912.5 719 62.3
Rhsim03G0147100 Rhododendron simsii HOM05D004070 ORTHO05D004904 1.9e-261 906.0 711 62.3
Sabra10G0141400 Salix brachista HOM05D004070 ORTHO05D004904 1.9e-261 906.0 746 60.5
Rhsim03G0146900 Rhododendron simsii HOM05D004070 ORTHO05D004904 4.2e-261 904.8 716 62.6
Migut.F01473 Erythranthe guttata HOM05D004070 ORTHO05D004904 9.3e-261 903.7 714 64.7
MD01G1158000 Malus domestica HOM05D004070 ORTHO05D004904 1.2e-260 903.3 715 62.1
MD07G1226700 Malus domestica HOM05D004070 ORTHO05D004904 2.1e-260 902.5 714 61.8
Prupe.2G256300 Prunus persica HOM05D004070 ORTHO05D004904 3.0e-259 898.7 718 61.8
DCAR_011846 Daucus carota HOM05D004070 ORTHO05D004904 6.2e-257 891.0 712 61.8
Gorai.012G079500 Gossypium raimondii HOM05D004070 ORTHO05D004904 9.0e-256 887.1 726 61.3
RcHm_v2.0_Chr1g0370971 Rosa chinensis HOM05D004070 ORTHO05D004904 2.2e-254 882.5 730 61.1
Lj8A62T48 Lonicera japonica HOM05D004070 ORTHO05D004904 8.4e-254 880.6 646 66.4
FAN06G4674 Fragaria x ananassa HOM05D004070 ORTHO05D004904 1.4e-253 879.8 736 60.6
TWI73G0078 Tripterygium wilfordii HOM05D004070 ORTHO05D004904 1.6e-252 876.3 724 60.8
FAN03G3092 Fragaria x ananassa HOM05D004070 ORTHO05D004904 2.1e-252 875.9 731 60.6
Gorai.011G290600 Gossypium raimondii HOM05D004070 ORTHO05D004904 3.5e-252 875.2 706 62.3
FAN01G1500 Fragaria x ananassa HOM05D004070 ORTHO05D004904 4.6e-252 874.8 739 59.7
Gohir.A10G238300 Gossypium hirsutum HOM05D004070 ORTHO05D004904 4.6e-252 874.8 706 62.2
Gohir.D10G250200 Gossypium hirsutum HOM05D004070 ORTHO05D004904 7.9e-252 874.0 706 62.3
Manes.10G008700 Manihot esculenta HOM05D004070 ORTHO05D004904 1.8e-251 872.8 707 60.1
FvH4_7g25120 Fragaria vesca HOM05D004070 ORTHO05D004904 2.3e-251 872.5 725 60.3
QL08p063798 Quercus lobata HOM05D004070 ORTHO05D004904 7.4e-250 867.5 704 60.2
ECA238G2061 Erigeron canadensis HOM05D004070 ORTHO05D004904 2.8e-249 865.5 716 61.0
EL10Ac2g04896 Beta vulgaris HOM05D004070 ORTHO05D004904 9.0e-248 860.5 719 59.0
Eucgr.J00174 Eucalyptus grandis HOM05D004070 ORTHO05D004904 9.0e-248 860.5 741 57.4
Aqoxy1G01303 Aquilegia oxysepala HOM05D004070 ORTHO05D004904 1.5e-247 859.8 719 59.0
Atru.chr12.102 Acer truncatum HOM05D004070 ORTHO05D004904 2.2e-246 855.9 704 60.5
CiPaw.02G195800 Carya illinoinensis HOM05D004070 ORTHO05D004904 8.4e-246 854.0 713 59.2
Lsat_1_v5_gn_2_125521 Lactuca sativa HOM05D004070 ORTHO05D004904 7.1e-245 850.9 723 59.8
Potri.010G184300 Populus trichocarpa HOM05D004070 ORTHO05D004904 1.2e-244 850.1 713 59.6
CiPaw.12G018900 Carya illinoinensis HOM05D004070 ORTHO05D004904 4.6e-244 848.2 713 58.8
PSO765G0033 Papaver somniferum HOM05D004070 ORTHO05D004904 2.3e-243 845.9 718 58.4
Psat5g130680 Pisum sativum HOM05D004070 ORTHO05D004904 2.3e-243 845.9 718 60.0
AUR62022946 Chenopodium quinoa HOM05D004070 ORTHO05D004904 8.7e-243 844.0 718 58.1
Lj6g0014816 Lotus japonicus HOM05D004070 ORTHO05D004904 4.3e-242 841.6 716 59.1
Duzib106G0498 Durio zibethinus HOM05D004070 ORTHO05D004904 7.4e-242 840.9 707 58.7
PSO349G0044 Papaver somniferum HOM05D004070 ORTHO05D004904 9.6e-242 840.5 719 58.1
Haze_17281 Corylus avellana HOM05D004070 ORTHO05D004904 2.8e-241 839.0 720 59.2
TPR.G27736 Trifolium pratense HOM05D004070 ORTHO05D004904 1.8e-240 836.3 716 58.9
AUR62012305 Chenopodium quinoa HOM05D004070 ORTHO05D004904 4.1e-240 835.1 718 57.4
Phvul.001G245900 Phaseolus vulgaris HOM05D004070 ORTHO05D004904 9.0e-240 833.9 726 58.7
Glyma.18G024300 Glycine max HOM05D004070 ORTHO05D004904 2.6e-239 832.4 700 60.0
Medtr3g071610 Medicago truncatula HOM05D004070 ORTHO05D004904 3.4e-239 832.0 705 59.9
Glyma.11G232700 Glycine max HOM05D004070 ORTHO05D004904 1.3e-238 830.1 698 59.7
HanXRQChr17g0536301 Helianthus annuus HOM05D004070 ORTHO05D004904 1.9e-237 826.2 723 56.4
GSVIVG01032751001 Vitis vinifera HOM05D004070 ORTHO05D004904 2.1e-236 822.8 625 65.8
Glyma.14G056600 Glycine max HOM05D004070 ORTHO05D004904 6.1e-236 821.2 707 59.3
Glyma.02G262300 Glycine max HOM05D004070 ORTHO05D004904 5.1e-235 818.1 709 58.4
Glyma.14G056500 Glycine max HOM05D004070 ORTHO05D004904 5.1e-235 818.1 708 58.9
Haze_17272 Corylus avellana HOM05D004070 ORTHO05D004904 6.7e-235 817.8 720 58.1
Ca_15154_v3 Cicer arietinum L. HOM05D004070 ORTHO05D004904 5.7e-234 814.7 718 58.4
Nn2g10988 Nelumbo nucifera HOM05D004070 ORTHO05D004904 7.4e-234 814.3 712 57.0
CANSAT56G1738 Cannabis sativa HOM05D004070 ORTHO05D004904 9.7e-234 813.9 714 55.7
Lalb_Chr08g0231511 Lupinus albus HOM05D004070 ORTHO05D004904 3.7e-233 812.0 721 56.4
VMungo1383G0354 Vigna mungo HOM05D004070 ORTHO05D004904 1.8e-232 809.7 719 56.7
Cc02_g06030 Coffea canephora HOM05D004070 ORTHO05D004904 1.2e-231 807.0 623 64.7
Gohir.A05G332000 Gossypium hirsutum HOM05D004070 ORTHO05D004904 1.2e-231 807.0 662 61.5
PGR044G0681 Punica granatum HOM05D004070 ORTHO05D004904 1.5e-231 806.6 710 56.2
VMungo0647G1128 Vigna mungo HOM05D004070 ORTHO05D004904 4.5e-231 805.1 711 57.5
Ciclev10031026m.g Citrus clementina HOM05D004070 ORTHO05D004904 2.1e-228 796.2 652 61.5
Sabra10G0141500 Salix brachista HOM05D004070 ORTHO05D004904 1.4e-227 793.5 864 50.0
CsaV3_5G010510 Cucumis sativus L. HOM05D004070 ORTHO05D004904 2.6e-226 789.3 723 54.6
ClCG07G004560 Citrullus lanatus HOM05D004070 ORTHO05D004904 9.7e-226 787.3 726 55.1
Sed0002479 Sechium edule HOM05D004070 ORTHO05D004904 2.8e-225 785.8 716 55.3
Gohir.D04G070700 Gossypium hirsutum HOM05D004070 ORTHO05D004904 6.3e-225 784.6 722 56.1
ATR0174G011 Amborella trichopoda HOM05D004070 ORTHO05D004904 1.0e-222 777.3 727 53.6
Thhalv10012879m.g Eutrema salsugineum HOM05D004070 ORTHO05D004904 3.0e-219 765.8 707 51.3
AT5G05460 Arabidopsis thaliana HOM05D004070 ORTHO05D004904 4.4e-218 761.9 710 52.0
ClCG07G004550 Citrullus lanatus HOM05D004070 ORTHO05D004904 4.4e-218 761.9 716 54.9
Carub.0006s0436 Capsella rubella HOM05D004070 ORTHO05D004904 5.7e-218 761.5 725 51.7
AL6G15350 Arabidopsis lyrata HOM05D004070 ORTHO05D004904 1.3e-217 760.4 709 51.9
FAN10G1680 Fragaria x ananassa HOM05D004070 ORTHO05D004904 2.4e-216 756.1 679 58.3
CARHR207790 Cardamine hirsuta HOM05D004070 ORTHO05D004904 9.1e-216 754.2 719 51.5
Sp6g37380 Schrenkiella parvula HOM05D004070 ORTHO05D004904 9.1e-216 754.2 707 50.9
CsaV3_5G010500 Cucumis sativus L. HOM05D004070 ORTHO05D004904 2.9e-214 749.2 713 53.3
BcaB01g05761 Brassica carinata HOM05D004070 ORTHO05D004904 9.4e-213 744.2 702 51.6
A03p02310 Brassica napus HOM05D004070 ORTHO05D004904 2.7e-212 742.7 705 51.3
BraA03t09594Z Brassica rapa HOM05D004070 ORTHO05D004904 8.8e-211 737.6 704 51.4
BcaB01g05950 Brassica carinata HOM05D004070 ORTHO05D004904 2.6e-210 736.1 705 50.8
BolC3t12817H Brassica oleracea HOM05D004070 ORTHO05D004904 2.6e-210 736.1 705 50.8
Ah.16g103890 Amaranthus hybridus HOM05D004070 ORTHO05D004904 2.2e-209 733.0 713 54.0
C03p02630 Brassica napus HOM05D004070 ORTHO05D004904 2.2e-209 733.0 705 50.6
Sp3g09370 Schrenkiella parvula HOM05D004070 ORTHO05D004904 2.8e-209 732.6 709 51.8
CSS0045603 Camellia sinensis var. sinensis HOM05D004070 ORTHO05D004904 4.8e-209 731.9 567 63.8
Carub.0003s1033 Capsella rubella HOM05D004070 ORTHO05D004904 4.1e-208 728.8 719 50.5
PGR142G0892 Punica granatum HOM05D004070 ORTHO05D004904 4.5e-207 725.3 711 53.4
Thhalv10020200m.g Eutrema salsugineum HOM05D004070 ORTHO05D004904 2.9e-206 722.6 717 50.3
AT3G11040 Arabidopsis thaliana HOM05D004070 ORTHO05D004904 5.0e-206 721.8 708 49.9
THA.LOC104816686 Tarenaya hassleriana HOM05D004070 ORTHO05D004904 6.5e-206 721.5 728 50.7
Aa31LG3G4060 Aethionema arabicum HOM05D004070 ORTHO05D004904 1.5e-205 720.3 701 51.8
BcaB04g21158 Brassica carinata HOM05D004070 ORTHO05D004904 2.5e-205 719.5 721 50.2
unitig_32.g11775 Utricularia gibba HOM05D004070 ORTHO05D004904 1.2e-204 717.2 704 52.4
Aa31LG11G6530 Aethionema arabicum HOM05D004070 ORTHO05D004904 1.6e-204 716.8 709 49.5
BolC1t05338H Brassica oleracea HOM05D004070 ORTHO05D004904 3.6e-204 715.7 726 49.9
CARHR085620 Cardamine hirsuta HOM05D004070 ORTHO05D004904 4.0e-203 712.2 715 49.5
AL3G22590 Arabidopsis lyrata HOM05D004070 ORTHO05D004904 1.5e-202 710.3 720 49.2
arahy.Tifrunner.gnm1.ann1.T4ULTV Arachis hypogaea HOM05D004070 ORTHO05D004904 2.2e-201 706.4 705 53.2
arahy.Tifrunner.gnm1.ann1.PDR9Z8 Arachis hypogaea HOM05D004070 ORTHO05D004904 3.1e-200 702.6 754 49.9
SEGI_36115 Sequoiadendron giganteum HOM05D004070 ORTHO05D004904 5.4e-200 701.8 764 48.4
MELO3C018386.2 Cucumis melo HOM05D004070 ORTHO05D004904 2.9e-198 696.0 724 50.6
arahy.Tifrunner.gnm1.ann1.DADU25 Arachis hypogaea HOM05D004070 ORTHO05D004904 7.2e-197 691.4 757 49.3
arahy.Tifrunner.gnm1.ann1.L3EDXB Arachis hypogaea HOM05D004070 ORTHO05D004904 1.4e-195 687.2 706 52.3
Os05g0346500 Oryza sativa ssp. japonica HOM05D004070 ORTHO05D004904 4.4e-194 682.2 709 48.4
MELO3C018385.2 Cucumis melo HOM05D004070 ORTHO05D004904 9.5e-189 664.5 722 48.1
CANSAT56G2024 Cannabis sativa HOM05D004070 ORTHO05D004904 1.6e-188 663.7 717 49.9
CDE06G0669 Ceratophyllum demersum HOM05D004070 ORTHO05D004904 3.0e-187 659.4 701 49.5
BcaC09g48150 Brassica carinata HOM05D004070 ORTHO05D004904 6.4e-185 651.7 608 53.6
AL467U10010 Arabidopsis lyrata HOM05D004070 ORTHO05D004904 5.0e-174 615.5 721 45.2
Manes.10G008500 Manihot esculenta HOM05D004070 ORTHO05D004904 5.0e-174 615.5 596 54.4
Sc11g0005320 Simmondsia chinensis HOM05D004070 ORTHO05D004904 8.1e-172 608.2 563 54.9
COL.COLO4_25787 Corchorus olitorius HOM05D004070 ORTHO05D004904 6.4e-169 598.6 707 46.1
HPP92_006774 Vanilla planifolia HOM05D004070 ORTHO05D004904 1.1e-168 597.8 709 46.0
Zm00001eb347620 Zea mays HOM05D004070 ORTHO05D004904 1.6e-140 504.2 583 45.5
BcaC09g48154 Brassica carinata HOM05D004070 ORTHO05D004904 8.2e-132 475.3 345 63.2
SGA_v2.0_scaffold395G50725 Striga asiatica HOM05D004070 ORTHO05D004904 1.4e-128 464.5 420 56.4
SMO351G0021 Selaginella moellendorffii HOM05D004070 ORTHO05D004904 5.1e-126 456.1 456 48.0
Cpa.g.sc19.130 Carica papaya HOM05D004070 ORTHO05D004904 9.7e-125 451.8 403 55.1
PSO478G2175 Papaver somniferum HOM05D004070 ORTHO05D004904 3.6e-111 406.8 330 59.4
Dinv21779 Davidia involucrata HOM05D004070 ORTHO05D004904 4.2e-104 383.3 244 75.8
Glyma.02G262251 Glycine max HOM05D004070 ORTHO05D004904 3.0e-102 377.1 430 48.4
BraA01t04204Z Brassica rapa HOM05D004070 ORTHO05D004904 3.1e-99 367.1 474 43.0
CBR_g6382 Chara braunii HOM05D004070 ORTHO05D004904 1.7e-97 361.3 433 43.9
PGSC0003DMG400023947 Solanum tuberosum HOM05D004070 ORTHO05D004904 8.2e-92 342.4 344 52.3
Pp3c4_19160 Physcomitrium patens HOM05D004070 ORTHO05D004904 2.7e-87 327.4 600 33.2
AagrBONN_evm.TU.Sc2ySwM_362.570 Anthoceros agrestis HOM05D004070 ORTHO05D004904 2.7e-82 310.8 583 33.4
Mapoly0073s0082 Marchantia polymorpha HOM05D004070 ORTHO05D004904 3.5e-82 310.5 613 33.9
Cre13.g582250 Chlamydomonas reinhardtii HOM05D004070 ORTHO05D004904 2.9e-81 307.4 324 45.4
Glyma.02G262200 Glycine max HOM05D004070 ORTHO05D004904 2.7e-58 231.1 147 70.1
SGA_v2.0_scaffold395G50724 Striga asiatica HOM05D004070 ORTHO05D004904 2.3e-57 228.0 150 71.3
Cpa.g.sc19.132 Carica papaya HOM05D004070 ORTHO05D004904 4.3e-56 223.8 246 48.0
BraA01t04205Z Brassica rapa HOM05D004070 ORTHO05D004904 6.2e-55 219.9 158 63.3
Sopen01g021300 Solanum pennellii HOM05D004070 ORTHO05D004904 1.3e-52 212.2 202 52.0
Potri.008G073001 Populus trichocarpa HOM05D004070 ORTHO05D004904 2.3e-49 201.4 237 46.0
SGA_v2.0_scaffold395G50723 Striga asiatica HOM05D004070 ORTHO05D004904 5.1e-49 200.3 135 67.4
BcaB07g33013 Brassica carinata HOM05D004070 ORTHO05D004904 1.1e-43 182.6 236 43.6
MELO3C034437.2 Cucumis melo HOM05D004070 ORTHO05D004904 1.7e-41 175.3 142 57.0
Atru.chr12.101 Acer truncatum HOM05D004070 ORTHO05D004904 1.1e-40 172.6 178 49.4
AT3G61010 Arabidopsis thaliana HOM05D004070 ORTHO05D004904 6.2e-39 166.8 409 28.6
BcaB04g21152 Brassica carinata HOM05D004070 ORTHO05D004904 1.5e-32 145.6 99 66.7
BcaB04g21155 Brassica carinata HOM05D004070 ORTHO05D004904 1.5e-32 145.6 99 66.7
BcaB04g21156 Brassica carinata HOM05D004070 ORTHO05D004904 1.5e-32 145.6 99 66.7
Dinv21778 Davidia involucrata HOM05D004070 ORTHO05D004904 3.5e-26 124.4 279 33.7
BraA01t04203Z Brassica rapa HOM05D000053 ORTHO05D000035 1.3e-25 122.5 245 31.8
BolC1t05337H Brassica oleracea HOM05D000053 ORTHO05D000035 3.9e-25 120.9 249 29.7
arahy.Tifrunner.gnm1.ann1.0XTL3F Arachis hypogaea HOM05D004070 ORTHO05D004904 9.9e-21 106.3 141 41.1
CsaV3_5G010480 Cucumis sativus L. HOM05D004070 ORTHO05D004904 6.4e-20 103.6 205 34.1
arahy.Tifrunner.gnm1.ann1.JYP4ZT Arachis hypogaea HOM05D004070 ORTHO05D004904 8.4e-20 103.2 146 35.6
Sabra08G0054200 Salix brachista HOM05D004070 ORTHO05D004904 1.4e-19 102.4 238 33.2
Potri.008G072901 Populus trichocarpa HOM05D004070 ORTHO05D004904 5.6e-16 90.5 122 40.2
arahy.Tifrunner.gnm1.ann1.N2R911 Arachis hypogaea HOM05D004070 ORTHO05D004904 7.4e-16 90.1 72 62.5
BcaB03g16457 Brassica carinata HOM05D004070 ORTHO05D032257 8.2e-15 86.7 72 58.3
BcaB07g33265 Brassica carinata HOM05D004070 ORTHO05D032257 7.9e-10 70.1 61 54.1
BcaB07g33267 Brassica carinata HOM05D004070 ORTHO05D032257 7.9e-10 70.1 61 54.1
BcaC06g31359 Brassica carinata HOM05D004070 ORTHO05D000295 1.5e-08 65.9 46 65.2


User provided reference genes

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