Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu043111.1 Olea europaea HOM05D000828 ORTHO05D000623 1.6e-42 175.6 86 100.0
Nitab4.5_0008430g0040 Nicotiana tabacum HOM05D000828 ORTHO05D000623 1.7e-12 75.9 69 50.7
Nn1g09159 Nelumbo nucifera HOM05D000828 ORTHO05D000623 2.3e-12 75.5 83 50.6
Peaxi162Scf00768g00031 Petunia axillaris HOM05D000828 ORTHO05D000623 1.9e-11 72.4 69 52.2
CAN.G370.94 Capsicum annuum HOM05D000828 ORTHO05D000623 7.2e-11 70.5 73 50.7
PGSC0003DMG400010193 Solanum tuberosum HOM05D000828 ORTHO05D000623 7.2e-11 70.5 69 50.7
CiPaw.10G060100 Carya illinoinensis HOM05D000828 ORTHO05D000623 9.5e-11 70.1 69 50.7
CSS0004670 Camellia sinensis var. sinensis HOM05D000828 ORTHO05D000623 1.2e-10 69.7 69 50.7
CSS0046843 Camellia sinensis var. sinensis HOM05D000828 ORTHO05D000623 1.2e-10 69.7 69 50.7
COL.COLO4_31276 Corchorus olitorius HOM05D000828 ORTHO05D000623 2.8e-10 68.6 71 50.7
Ciclev10017869m.g Citrus clementina HOM05D000828 ORTHO05D000623 4.7e-10 67.8 69 47.8
Solyc02g073580.1 Solanum lycopersicum HOM05D000828 ORTHO05D000623 4.7e-10 67.8 69 49.3
Sopen02g021570 Solanum pennellii HOM05D000828 ORTHO05D000623 4.7e-10 67.8 69 49.3
Dinv16788 Davidia involucrata HOM05D000828 ORTHO05D000623 6.1e-10 67.4 73 49.3
Manes.17G056900 Manihot esculenta HOM05D000828 ORTHO05D000623 6.1e-10 67.4 76 51.3
RcHm_v2.0_Chr5g0011031 Rosa chinensis HOM05D000828 ORTHO05D000623 8.0e-10 67.0 72 51.4
Oeu039906.1 Olea europaea HOM05D000828 ORTHO05D000623 1.4e-09 66.2 69 50.7
Prupe.4G062700 Prunus persica HOM05D000828 ORTHO05D000623 1.8e-09 65.9 70 51.4
QL05p047746 Quercus lobata HOM05D000828 ORTHO05D000623 1.8e-09 65.9 72 48.6
Migut.M01028 Erythranthe guttata HOM05D000828 ORTHO05D000623 3.0e-09 65.1 69 47.8
Gohir.D10G037000 Gossypium hirsutum HOM05D000828 ORTHO05D000623 3.0e-09 65.1 69 46.4
Gorai.011G038900 Gossypium raimondii HOM05D000828 ORTHO05D000623 3.0e-09 65.1 69 46.4
Cc02_g15140 Coffea canephora HOM05D000828 ORTHO05D000623 4.0e-09 64.7 72 45.8
Duzib235G1498 Durio zibethinus HOM05D000828 ORTHO05D000623 4.0e-09 64.7 69 46.4
FAN16G0165 Fragaria x ananassa HOM05D000828 ORTHO05D000623 4.0e-09 64.7 74 48.6
FAN21G2654 Fragaria x ananassa HOM05D000828 ORTHO05D000623 4.0e-09 64.7 74 48.6
FAN25G1080 Fragaria x ananassa HOM05D000828 ORTHO05D000623 5.2e-09 64.3 74 48.6
Nitab4.5_0000605g0060 Nicotiana tabacum HOM05D000828 ORTHO05D000623 5.2e-09 64.3 53 58.5
FvH4_3g07650 Fragaria vesca HOM05D000828 ORTHO05D000623 6.8e-09 63.9 74 47.3
FAN11G4025 Fragaria x ananassa HOM05D000828 ORTHO05D000623 6.8e-09 63.9 74 47.3
Lsat_1_v5_gn_7_25200 Lactuca sativa HOM05D000828 ORTHO05D000623 1.2e-08 63.2 68 47.1
Thecc.06G168900 Theobroma cacao HOM05D000828 ORTHO05D000623 1.2e-08 63.2 71 46.5
Actinidia16789 Actinidia chinensis HOM05D000828 ORTHO05D000623 1.5e-08 62.8 71 49.3
MD05G1299100 Malus domestica HOM05D000828 ORTHO05D000623 2.6e-08 62.0 70 48.6
C01p12620 Brassica napus HOM05D000828 ORTHO05D000623 4.4e-08 61.2 71 46.5
BolC1t01239H Brassica oleracea HOM05D000828 ORTHO05D000623 4.4e-08 61.2 71 46.5
GSVIVG01021229001 Vitis vinifera HOM05D000828 ORTHO05D000623 4.4e-08 61.2 69 49.3
A01p10690 Brassica napus HOM05D000828 ORTHO05D000623 5.7e-08 60.8 71 47.9
BraA01t01015Z Brassica rapa HOM05D000828 ORTHO05D000623 5.7e-08 60.8 71 47.9
Gohir.A10G036300 Gossypium hirsutum HOM05D000828 ORTHO05D000623 5.7e-08 60.8 69 44.9
ECA236G2252 Erigeron canadensis HOM05D000828 ORTHO05D000623 7.5e-08 60.5 66 43.9
Nn1g04459 Nelumbo nucifera HOM05D000828 ORTHO05D000623 7.5e-08 60.5 69 44.9
Potri.004G058200 Populus trichocarpa HOM05D000828 ORTHO05D000623 7.5e-08 60.5 74 43.2
Sabra04G0037800 Salix brachista HOM05D000828 ORTHO05D000623 7.5e-08 60.5 74 43.2
Atru.chr10.1648 Acer truncatum HOM05D000828 ORTHO05D000623 9.8e-08 60.1 69 44.9
ClCG03G007620 Citrullus lanatus HOM05D000828 ORTHO05D000623 9.8e-08 60.1 68 44.1
SalBow7G2701 Salvia bowleyana HOM05D000828 ORTHO05D000623 9.8e-08 60.1 70 44.3
AL7G35610 Arabidopsis lyrata HOM05D000828 ORTHO05D000623 1.3e-07 59.7 68 45.6
SalBow8G1411 Salvia bowleyana HOM05D000828 ORTHO05D000623 1.3e-07 59.7 62 46.8
Sp7g17390 Schrenkiella parvula HOM05D000828 ORTHO05D000623 1.7e-07 59.3 71 45.1
TAR624G1056 Trochodendron aralioides HOM05D000828 ORTHO05D000623 2.2e-07 58.9 61 50.8
Atru.chr10.1647 Acer truncatum HOM05D000828 ORTHO05D000623 3.7e-07 58.2 69 44.9
EL10Ac8g20585 Beta vulgaris HOM05D000828 ORTHO05D000623 3.7e-07 58.2 67 44.8
HanXRQChr04g0116961 Helianthus annuus HOM05D000828 ORTHO05D000623 3.7e-07 58.2 66 42.4
Aa31LG6G1400 Aethionema arabicum HOM05D000828 ORTHO05D000623 4.9e-07 57.8 72 44.4
Cpa.g.sc7.81 Carica papaya HOM05D000828 ORTHO05D000623 4.9e-07 57.8 76 40.8
Migut.H01436 Erythranthe guttata HOM05D000828 ORTHO05D000623 4.9e-07 57.8 71 43.7
MD14G1136000 Malus domestica HOM05D000828 ORTHO05D000623 6.3e-07 57.4 70 41.4
Medtr2g016330 Medicago truncatula HOM05D000828 ORTHO05D000623 6.3e-07 57.4 73 42.5
Medtr2g016370 Medicago truncatula HOM05D000828 ORTHO05D000623 6.3e-07 57.4 73 42.5
PGR031G0305 Punica granatum HOM05D000828 ORTHO05D000623 6.3e-07 57.4 71 46.5
Thhalv10027388m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 1.1e-06 56.6 73 42.5
AT4G18650 Arabidopsis thaliana HOM05D000828 ORTHO05D000623 1.8e-06 55.8 70 44.3
Lalb_Chr18g0054581 Lupinus albus HOM05D000828 ORTHO05D000623 1.8e-06 55.8 71 40.8
CARHR225510 Cardamine hirsuta HOM05D000828 ORTHO05D000623 2.4e-06 55.5 70 44.3
AUR62031223 Chenopodium quinoa HOM05D000828 ORTHO05D000623 3.1e-06 55.1 64 45.3
Hma1.2p1_0215F.1_g090870 Hydrangea macrophylla HOM05D000828 ORTHO05D000623 3.1e-06 55.1 69 40.6
Lalb_Chr15g0086121 Lupinus albus HOM05D000828 ORTHO05D000623 3.1e-06 55.1 85 40.0
Carub.0007s2257 Capsella rubella HOM05D000828 ORTHO05D000623 4.1e-06 54.7 70 44.3
Glyma.15G083900 Glycine max HOM05D000828 ORTHO05D000623 4.1e-06 54.7 73 42.5
TWI38G0070 Tripterygium wilfordii HOM05D000828 ORTHO05D000623 5.4e-06 54.3 69 43.5
Ca_00445_v3 Cicer arietinum L. HOM05D000828 ORTHO05D000623 7.0e-06 53.9 68 44.1
Glyma.13G228600 Glycine max HOM05D000828 ORTHO05D000623 9.2e-06 53.5 73 41.1


User provided reference genes

Program Settings