Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042861.1 Olea europaea HOM05D004875 ORTHO05D005598 3.0e-43 177.9 81 100.0
Oeu019275.2 Olea europaea HOM05D004875 ORTHO05D005598 6.4e-17 90.5 46 91.3
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 4.1e-16 87.8 46 87.0
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 5.4e-16 87.4 48 83.3
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 5.4e-16 87.4 46 87.0
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 1.6e-15 85.9 46 84.8
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 2.0e-15 85.5 46 84.8
Nitab4.5_0000002g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 3.5e-15 84.7 46 84.8
Nitab4.5_0005130g0040 Nicotiana tabacum HOM05D004875 ORTHO05D005598 3.5e-15 84.7 46 84.8
Solyc09g057910.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 3.5e-15 84.7 46 84.8
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 3.5e-15 84.7 46 84.8
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 4.6e-15 84.3 46 82.6
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 4.6e-15 84.3 46 84.8
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 6.0e-15 84.0 46 84.8
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 6.0e-15 84.0 46 82.6
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 6.0e-15 84.0 46 84.8
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 6.0e-15 84.0 46 84.8
Atru.chr3.4118 Acer truncatum HOM05D004875 ORTHO05D005598 7.8e-15 83.6 46 82.6
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.3e-14 82.8 46 80.4
Cpa.g.sc2.355 Carica papaya HOM05D004875 ORTHO05D005598 1.3e-14 82.8 46 80.4
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 1.3e-14 82.8 46 82.6
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 1.3e-14 82.8 46 80.4
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 1.3e-14 82.8 46 80.4
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 1.3e-14 82.8 48 81.2
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 1.3e-14 82.8 46 82.6
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 1.3e-14 82.8 46 82.6
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 1.3e-14 82.8 46 82.6
Actinidia32610 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.7e-14 82.4 46 80.4
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 1.7e-14 82.4 46 80.4
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 1.7e-14 82.4 46 82.6
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 1.7e-14 82.4 46 84.8
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 1.7e-14 82.4 46 80.4
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 2.3e-14 82.0 46 78.3
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 3.0e-14 81.6 46 80.4
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 3.0e-14 81.6 46 82.6
unitig_0.g436 Utricularia gibba HOM05D004875 ORTHO05D005598 3.0e-14 81.6 46 82.6
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 3.9e-14 81.3 48 79.2
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.9e-14 81.3 48 79.2
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.9e-14 81.3 48 79.2
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.9e-14 81.3 48 79.2
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.9e-14 81.3 48 79.2
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 3.9e-14 81.3 46 80.4
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 3.9e-14 81.3 48 79.2
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 5.0e-14 80.9 46 82.6
MELO3C025695.2 Cucumis melo HOM05D004875 ORTHO05D005598 5.0e-14 80.9 46 80.4
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 5.0e-14 80.9 46 80.4
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 5.0e-14 80.9 45 82.2
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 5.0e-14 80.9 46 78.3
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 5.0e-14 80.9 46 78.3
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 6.6e-14 80.5 46 80.4
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 6.6e-14 80.5 46 78.3
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 8.6e-14 80.1 46 82.6
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 8.6e-14 80.1 46 80.4
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 1.1e-13 79.7 46 78.3
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 1.1e-13 79.7 46 80.4
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 1.1e-13 79.7 46 78.3
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 1.1e-13 79.7 48 79.2
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 1.1e-13 79.7 46 78.3
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 1.1e-13 79.7 46 80.4
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 1.5e-13 79.3 46 76.1
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 1.9e-13 79.0 46 80.4
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 1.9e-13 79.0 45 80.0
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 2.5e-13 78.6 46 80.4
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 2.5e-13 78.6 46 80.4
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 2.5e-13 78.6 46 80.4
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 2.5e-13 78.6 46 80.4
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 2.5e-13 78.6 46 80.4
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 2.5e-13 78.6 46 80.4
Dinv09669 Davidia involucrata HOM05D004875 ORTHO05D005598 2.5e-13 78.6 46 76.1
Thhalv10012545m.g Eutrema salsugineum HOM05D004875 ORTHO05D005598 2.5e-13 78.6 46 80.4
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 2.5e-13 78.6 46 80.4
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 3.3e-13 78.2 46 78.3
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 4.3e-13 77.8 46 78.3
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 4.3e-13 77.8 46 76.1
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 4.3e-13 77.8 46 78.3
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 5.6e-13 77.4 46 78.3
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 5.6e-13 77.4 46 78.3
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 5.6e-13 77.4 46 78.3
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 5.6e-13 77.4 46 78.3
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 5.6e-13 77.4 46 78.3
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 5.6e-13 77.4 46 78.3
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 5.6e-13 77.4 46 76.1
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 7.3e-13 77.0 46 76.1
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 9.5e-13 76.6 45 77.8
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 1.2e-12 76.3 46 76.1
Peaxi162Scf00055g01011 Petunia axillaris HOM05D004875 ORTHO05D005598 1.2e-12 76.3 46 78.3
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 1.6e-12 75.9 46 76.1
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 2.1e-12 75.5 46 73.9
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 2.8e-12 75.1 46 73.9
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 2.8e-12 75.1 46 73.9
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 2.8e-12 75.1 46 73.9
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 3.6e-12 74.7 46 73.9
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 4.7e-12 74.3 46 69.6
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 4.7e-12 74.3 46 69.6
SHI19218 Sapria himalayana HOM05D004875 ORTHO05D005598 6.2e-12 73.9 46 71.7
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 1.1e-11 73.2 46 67.4
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 1.1e-11 73.2 46 69.6
Sc12g0001960 Simmondsia chinensis HOM05D004875 ORTHO05D005598 2.3e-11 72.0 46 69.6
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 4.0e-11 71.2 46 67.4
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 5.2e-11 70.9 46 69.6
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 4.4e-10 67.8 46 58.7
SEGI_36322 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 5.8e-10 67.4 46 63.0
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 2.2e-09 65.5 39 71.8


User provided reference genes

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