Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042754.1 Olea europaea HOM05D003622 ORTHO05D004453 3.7e-31 137.5 66 100.0
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 3.4e-16 87.8 49 77.6
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 4.4e-16 87.4 48 81.2
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 7.5e-16 86.7 53 71.7
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 1.7e-15 85.5 53 73.6
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.8e-15 84.7 52 73.1
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 3.7e-15 84.3 52 71.2
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 1.1e-14 82.8 50 74.0
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 5.4e-14 80.5 48 75.0
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 5.4e-14 80.5 47 74.5
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 1.7e-12 75.5 50 68.0
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.7e-12 75.5 45 73.3
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 2.9e-12 74.7 48 68.8
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.9e-12 74.7 51 64.7
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 3.9e-12 74.3 48 70.8
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 3.9e-12 74.3 48 68.8
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 5.0e-12 73.9 48 70.8
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 5.0e-12 73.9 48 70.8
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.5e-11 72.4 48 66.7
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 1.5e-11 72.4 50 66.0
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.9e-11 72.0 44 70.5
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.5e-11 71.6 56 62.5
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 2.5e-11 71.6 50 62.0
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 3.3e-11 71.2 50 66.0
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 3.3e-11 71.2 48 64.6
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 3.3e-11 71.2 50 64.0
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 3.3e-11 71.2 48 64.6
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 5.6e-11 70.5 55 61.8
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 5.6e-11 70.5 48 64.6
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 5.6e-11 70.5 50 66.0
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 7.3e-11 70.1 50 64.0
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 7.3e-11 70.1 50 62.0
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 7.3e-11 70.1 50 60.0
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 7.3e-11 70.1 48 62.5
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 9.5e-11 69.7 48 64.6
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 9.5e-11 69.7 50 60.0
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 9.5e-11 69.7 50 60.0
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 9.5e-11 69.7 48 62.5
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 1.2e-10 69.3 56 64.3
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 1.6e-10 68.9 50 60.0
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 1.6e-10 68.9 50 60.0
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 1.6e-10 68.9 50 60.0
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 2.8e-10 68.2 47 59.6
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 2.8e-10 68.2 44 68.2
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.8e-10 68.2 44 68.2
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.8e-10 68.2 44 68.2
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 4.7e-10 67.4 44 68.2
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 4.7e-10 67.4 59 54.2
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 4.7e-10 67.4 53 56.6
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 6.1e-10 67.0 50 58.0
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 6.1e-10 67.0 42 69.0
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 8.0e-10 66.6 48 60.4
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 1.0e-09 66.2 48 64.6
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.4e-09 65.9 50 60.0
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.4e-09 65.9 48 62.5
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.1e-09 64.7 44 65.9
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 3.1e-09 64.7 44 63.6
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 4.0e-09 64.3 56 55.4
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 6.8e-09 63.5 43 60.5
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.8e-09 63.5 47 61.7
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 6.8e-09 63.5 47 61.7
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 6.8e-09 63.5 47 59.6
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 8.9e-09 63.2 50 54.0
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.9e-09 63.2 54 59.3
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.9e-09 63.2 47 59.6
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 8.9e-09 63.2 54 59.3
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 8.9e-09 63.2 54 59.3
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 8.9e-09 63.2 47 57.4
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 1.2e-08 62.8 48 54.2
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.2e-08 62.8 53 54.7
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.5e-08 62.4 40 70.0
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 1.5e-08 62.4 48 54.2
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.5e-08 62.4 52 51.9
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 2.0e-08 62.0 47 57.4
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 2.6e-08 61.6 43 60.5
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 2.6e-08 61.6 43 60.5
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 2.6e-08 61.6 43 65.1
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 2.6e-08 61.6 43 65.1
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 2.6e-08 61.6 52 55.8
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 3.4e-08 61.2 43 58.1
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 4.4e-08 60.8 42 59.5
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 4.4e-08 60.8 51 54.9
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 4.4e-08 60.8 51 54.9
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 5.8e-08 60.5 40 67.5
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 5.8e-08 60.5 52 57.7
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 5.8e-08 60.5 48 56.2
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 7.5e-08 60.1 38 68.4
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 7.5e-08 60.1 48 56.2
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 7.5e-08 60.1 42 59.5
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 7.5e-08 60.1 48 56.2
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 7.5e-08 60.1 48 58.3
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 9.8e-08 59.7 48 56.2
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 9.8e-08 59.7 42 59.5
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 9.8e-08 59.7 40 62.5
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 9.8e-08 59.7 42 61.9
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 9.8e-08 59.7 49 55.1
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 9.8e-08 59.7 48 56.2
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 1.3e-07 59.3 43 58.1
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 1.3e-07 59.3 53 56.6
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.3e-07 59.3 44 56.8
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 1.7e-07 58.9 42 61.9
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.7e-07 58.9 52 51.9
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 1.7e-07 58.9 42 61.9
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 1.7e-07 58.9 52 50.0
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 2.2e-07 58.5 43 60.5
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 2.2e-07 58.5 43 60.5
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 2.2e-07 58.5 43 60.5
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 2.2e-07 58.5 43 60.5
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 2.2e-07 58.5 42 61.9
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.2e-07 58.5 42 61.9
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.2e-07 58.5 42 61.9
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.2e-07 58.5 42 61.9
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 2.2e-07 58.5 41 61.0
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 2.2e-07 58.5 48 52.1
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 2.9e-07 58.2 48 50.0
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 2.9e-07 58.2 53 52.8
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.9e-07 58.2 52 53.8
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 2.9e-07 58.2 51 54.9
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 2.9e-07 58.2 42 57.1
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 3.7e-07 57.8 42 57.1
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 3.7e-07 57.8 42 57.1
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 3.7e-07 57.8 42 57.1
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 3.7e-07 57.8 42 57.1
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 3.7e-07 57.8 42 57.1
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 4.9e-07 57.4 43 55.8
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 6.4e-07 57.0 43 58.1
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 8.3e-07 56.6 51 49.0
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 8.3e-07 56.6 51 47.1
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 1.1e-06 56.2 28 82.1
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 1.4e-06 55.8 43 55.8
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 1.4e-06 55.8 60 45.0
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 1.4e-06 55.8 28 78.6
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 3.2e-06 54.7 46 56.5
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 4.1e-06 54.3 52 51.9
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 4.1e-06 54.3 48 54.2
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 5.4e-06 53.9 76 42.1
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 9.2e-06 53.1 48 50.0


User provided reference genes

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