Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042559.1 Olea europaea HOM05D004547 ORTHO05D005133 2.2e-213 745.3 371 100.0
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 5.5e-140 501.5 428 66.8
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 1.4e-122 443.7 446 59.4
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 4.0e-122 442.2 446 59.2
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 1.1e-119 434.1 428 58.6
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 3.1e-119 432.6 429 59.7
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 4.1e-119 432.2 428 59.3
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 3.5e-118 429.1 427 57.1
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 5.9e-118 428.3 426 57.7
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 1.1e-116 424.1 428 57.9
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 3.2e-116 422.5 427 56.9
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 9.4e-116 421.0 427 56.9
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 9.4e-116 421.0 424 59.9
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 2.1e-115 419.9 426 56.3
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 2.7e-115 419.5 430 58.4
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 3.6e-115 419.1 426 56.1
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 8.0e-115 417.9 428 57.2
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 1.4e-114 417.2 428 57.5
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 1.8e-114 416.8 427 55.5
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 1.8e-114 416.8 429 57.3
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.3e-114 416.4 427 55.5
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 3.0e-114 416.0 427 56.9
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 5.2e-114 415.2 428 55.8
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 5.2e-114 415.2 427 55.3
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 8.8e-114 414.5 427 55.3
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 5.7e-113 411.8 427 55.0
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 9.8e-113 411.0 427 56.2
TPR.G20262 Trifolium pratense HOM05D004547 ORTHO05D005133 1.3e-112 410.6 424 56.6
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 1.7e-112 410.2 428 55.6
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 2.2e-112 409.8 427 56.0
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 2.2e-112 409.8 429 56.6
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 2.8e-112 409.5 428 56.8
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 2.8e-112 409.5 428 56.5
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 3.7e-112 409.1 427 55.7
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 3.7e-112 409.1 429 56.6
Medtr0004s0490 Medicago truncatula HOM05D004547 ORTHO05D005133 4.8e-112 408.7 425 56.2
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 6.3e-112 408.3 427 55.5
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 6.3e-112 408.3 428 55.8
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 1.1e-111 407.5 429 55.0
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 1.1e-111 407.5 426 56.8
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 1.8e-111 406.8 428 55.6
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 3.1e-111 406.0 427 55.3
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 3.1e-111 406.0 427 55.5
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 3.1e-111 406.0 429 56.2
Nitab4.5_0000895g0220 Nicotiana tabacum HOM05D004547 ORTHO05D005133 7.0e-111 404.8 429 56.2
Glyma.12G013000 Glycine max HOM05D004547 ORTHO05D005133 9.1e-111 404.4 425 56.2
TWI39G0203 Tripterygium wilfordii HOM05D004547 ORTHO05D005133 9.1e-111 404.4 425 54.8
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 1.6e-110 403.7 427 55.3
Glyma.09G224000 Glycine max HOM05D004547 ORTHO05D005133 1.6e-110 403.7 424 55.4
COL.COLO4_14121 Corchorus olitorius HOM05D004547 ORTHO05D005133 2.0e-110 403.3 427 55.5
Phvul.011G016000 Phaseolus vulgaris HOM05D004547 ORTHO05D005133 2.0e-110 403.3 424 55.7
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 2.0e-110 403.3 421 56.5
Medtr6g005610 Medicago truncatula HOM05D004547 ORTHO05D005133 2.7e-110 402.9 424 55.2
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 5.9e-110 401.7 427 55.3
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 7.7e-110 401.4 424 56.4
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 7.7e-110 401.4 427 55.0
Psat0s2825g0040 Pisum sativum HOM05D004547 ORTHO05D005133 1.0e-109 401.0 425 56.0
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 1.3e-109 400.6 428 54.9
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 2.9e-109 399.4 427 54.6
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 1.5e-108 397.1 426 53.3
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 1.5e-108 397.1 426 54.7
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 1.9e-108 396.7 427 54.3
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 1.9e-108 396.7 427 53.4
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 1.9e-108 396.7 427 55.0
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 3.2e-108 396.0 428 54.0
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 5.5e-108 395.2 427 53.4
VMungo1127G1242 Vigna mungo HOM05D004547 ORTHO05D005133 5.5e-108 395.2 423 54.6
Ca_19628_v3 Cicer arietinum L. HOM05D004547 ORTHO05D005133 7.2e-108 394.8 427 56.0
EL10Ac2g04890 Beta vulgaris HOM05D004547 ORTHO05D005133 9.4e-108 394.4 429 55.0
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 1.2e-107 394.0 428 53.0
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 2.1e-107 393.3 427 53.6
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 2.7e-107 392.9 428 53.5
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 3.6e-107 392.5 428 52.8
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 4.7e-107 392.1 428 53.5
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 4.7e-107 392.1 416 54.8
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 4.7e-107 392.1 428 53.7
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 2.3e-106 389.8 421 54.9
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 3.0e-106 389.4 426 53.3
MD07G1253600 Malus domestica HOM05D004547 ORTHO05D005133 3.0e-106 389.4 414 54.8
Ah.10g036230 Amaranthus hybridus HOM05D004547 ORTHO05D005133 4.0e-106 389.0 422 54.7
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 8.8e-106 387.9 427 52.0
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 8.8e-106 387.9 427 52.0
AUR62012299 Chenopodium quinoa HOM05D004547 ORTHO05D005133 1.5e-105 387.1 408 55.4
unitig_37.g11930 Utricularia gibba HOM05D004547 ORTHO05D005133 2.0e-105 386.7 428 55.1
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 2.6e-105 386.3 426 55.2
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 3.4e-105 386.0 426 54.9
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 7.5e-105 384.8 427 51.8
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 1.3e-104 384.0 427 51.8
ATR0317G078 Amborella trichopoda HOM05D004547 ORTHO05D005133 2.8e-104 382.9 428 51.9
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 3.7e-104 382.5 427 52.5
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 8.3e-104 381.3 429 52.4
BcaC03g14608 Brassica carinata HOM05D004547 ORTHO05D005133 1.1e-103 380.9 427 52.0
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 1.1e-103 380.9 428 51.6
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 1.1e-103 380.9 428 51.6
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 1.1e-103 380.9 428 51.6
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 1.8e-103 380.2 428 52.1
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 1.8e-103 380.2 429 52.9
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 9.2e-103 377.9 426 52.3
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 2.7e-102 376.3 428 51.9
AUR62022938 Chenopodium quinoa HOM05D004547 ORTHO05D005133 3.5e-102 375.9 444 51.1
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 5.9e-102 375.2 426 53.1
Medtr6g005670 Medicago truncatula HOM05D004547 ORTHO05D005133 3.3e-100 369.4 423 51.8
Zm00001eb389950 Zea mays HOM05D004547 ORTHO05D005133 7.5e-97 358.2 425 49.6
CARHR150020 Cardamine hirsuta HOM05D004547 ORTHO05D005133 1.3e-88 330.9 415 49.6
Hund13892 Selenicereus undatus HOM05D004547 ORTHO05D005133 1.0e-85 321.2 398 50.5
CDE04G0650 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 6.6e-77 292.0 349 51.0
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 8.6e-77 291.6 453 42.8
Pp3c7_60 Physcomitrium patens HOM05D004547 ORTHO05D005133 1.1e-74 284.6 439 41.5
Mapoly0007s0274 Marchantia polymorpha HOM05D004547 ORTHO05D005133 5.8e-73 278.9 439 39.4
SMO134G0015 Selaginella moellendorffii HOM05D004547 ORTHO05D005133 1.3e-72 277.7 409 41.6
A10p09160 Brassica napus HOM05D004547 ORTHO05D005133 3.5e-70 269.6 205 65.9
BolC2t08183H Brassica oleracea HOM05D004547 ORTHO05D005133 6.0e-70 268.9 205 65.9
SEGI_24302 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 2.0e-65 253.8 214 61.7
HPP92_005328 Vanilla planifolia HOM05D004547 ORTHO05D005133 1.9e-60 237.3 374 42.0
Solyc05g006950.4 Solanum lycopersicum HOM05D004547 ORTHO05D005133 6.7e-53 212.2 281 49.1
CBR_g31542 Chara braunii HOM05D004547 ORTHO05D005133 8.7e-53 211.8 456 34.2
HPP92_005318 Vanilla planifolia HOM05D004547 ORTHO05D005133 3.5e-46 189.9 288 41.0
A10p09220 Brassica napus HOM05D004547 ORTHO05D005133 2.2e-32 144.1 121 60.3
CDE04G0004 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 2.5e-31 140.6 156 55.1
Hma1.2p1_0432F.1_g151750 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 9.3e-31 138.7 111 67.6
BraA10t43002Z Brassica rapa HOM05D004547 ORTHO05D005133 1.2e-30 138.3 92 69.6
A10p09300 Brassica napus HOM05D004547 ORTHO05D005133 2.7e-30 137.1 92 70.7
HPP92_005319 Vanilla planifolia HOM05D004547 ORTHO05D005133 2.5e-28 130.6 153 50.3
PRCOL_00005609 Prasinoderma coloniale HOM05D004547 ORTHO05D005133 3.3e-28 130.2 393 28.8
SEGI_05738 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 1.6e-27 127.9 157 49.7
BraA10t43007Z Brassica rapa HOM05D004547 ORTHO05D005133 6.7e-21 105.9 75 65.3
BraA10t42999Z Brassica rapa HOM05D004547 ORTHO05D005133 1.1e-20 105.1 75 65.3
CAN.G74.49 Capsicum annuum HOM05D004547 ORTHO05D005133 2.2e-19 100.9 83 67.5
CAN.G689.6 Capsicum annuum HOM05D004547 ORTHO05D005133 5.3e-18 96.3 82 65.9
FAN06G1216 Fragaria x ananassa HOM05D004547 ORTHO05D005133 9.1e-18 95.5 80 65.0
CAN.G280.11 Capsicum annuum HOM05D004547 ORTHO05D005133 2.6e-17 94.0 83 63.9
Cre02.g086700 Chlamydomonas reinhardtii HOM05D004547 ORTHO05D005133 1.0e-16 92.0 218 29.8
Nitab4.5_0004558g0010 Nicotiana tabacum HOM05D004547 ORTHO05D016189 1.3e-11 75.1 82 53.7
GSVIVG01036042001 Vitis vinifera HOM05D004547 ORTHO05D005133 2.2e-11 74.3 99 46.5
CAN.G118.7 Capsicum annuum HOM05D004547 ORTHO05D005133 2.4e-10 70.9 59 61.0
CAN.G903.1 Capsicum annuum HOM05D004547 ORTHO05D005133 2.4e-10 70.9 64 62.5
Actinidia24695 Actinidia chinensis HOM05D004547 ORTHO05D005133 2.0e-09 67.8 59 59.3


User provided reference genes

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