Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042546.1 Olea europaea HOM05D004498 ORTHO05D005300 1.2e-124 449.9 233 100.0
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 4.4e-71 271.9 215 70.2
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 2.4e-69 266.2 220 67.7
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 2.4e-69 266.2 216 67.6
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 5.4e-69 265.0 220 67.3
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 5.4e-69 265.0 220 67.3
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 1.6e-68 263.5 217 67.7
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 2.1e-68 263.1 211 69.2
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 3.5e-68 262.3 220 67.7
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.6e-68 261.9 225 65.8
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 7.8e-68 261.2 217 65.4
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 7.8e-68 261.2 216 67.1
Dinv06575 Davidia involucrata HOM05D004498 ORTHO05D005300 1.0e-67 260.8 241 64.7
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 3.0e-67 259.2 216 65.3
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 1.5e-66 256.9 217 65.4
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 1.3e-65 253.8 218 65.6
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 1.3e-65 253.8 220 64.1
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 1.3e-65 253.8 219 64.4
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 1.3e-65 253.8 220 63.6
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 3.6e-65 252.3 220 64.1
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 3.6e-65 252.3 220 64.5
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 4.8e-65 251.9 217 63.6
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 4.8e-65 251.9 238 61.3
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 4.8e-65 251.9 220 63.2
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 6.2e-65 251.5 220 63.2
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 6.2e-65 251.5 219 63.5
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 8.1e-65 251.1 226 62.4
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 8.1e-65 251.1 219 62.6
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 8.1e-65 251.1 217 62.7
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 2.4e-64 249.6 219 62.6
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 5.3e-64 248.4 220 62.7
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 1.2e-63 247.3 217 60.8
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 1.5e-63 246.9 218 61.9
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 1.5e-63 246.9 218 61.9
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 1.5e-63 246.9 219 61.2
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 2.6e-63 246.1 217 64.1
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 2.6e-63 246.1 217 64.1
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 2.6e-63 246.1 218 61.0
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 2.6e-63 246.1 214 65.0
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 2.6e-63 246.1 214 65.0
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 3.4e-63 245.7 217 60.8
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 4.5e-63 245.4 218 61.0
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 4.5e-63 245.4 218 61.0
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 4.5e-63 245.4 218 61.0
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 4.5e-63 245.4 218 61.0
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 4.5e-63 245.4 214 64.0
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 5.8e-63 245.0 218 60.6
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 5.8e-63 245.0 217 60.4
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 5.8e-63 245.0 217 61.8
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 7.6e-63 244.6 217 60.4
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 7.6e-63 244.6 215 62.8
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 7.6e-63 244.6 238 58.8
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 9.9e-63 244.2 217 62.7
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 1.3e-62 243.8 214 62.1
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 1.3e-62 243.8 220 62.7
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 1.7e-62 243.4 216 61.6
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 2.2e-62 243.0 206 66.0
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 2.9e-62 242.7 217 59.9
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 3.8e-62 242.3 216 62.0
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 4.9e-62 241.9 266 56.4
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 6.4e-62 241.5 217 63.1
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 8.4e-62 241.1 218 62.4
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 1.4e-61 240.4 220 61.4
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 2.4e-61 239.6 220 61.4
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 9.3e-61 237.7 220 60.9
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 1.2e-60 237.3 215 61.4
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.2e-60 237.3 233 60.1
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 1.2e-60 237.3 228 60.1
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 1.6e-60 236.9 215 60.9
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 2.1e-60 236.5 215 60.9
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 2.1e-60 236.5 215 60.9
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 3.9e-59 232.3 257 54.9
MELO3C017661.2 Cucumis melo HOM05D004498 ORTHO05D005300 3.9e-59 232.3 195 63.6
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 1.9e-58 229.9 222 57.2
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 2.5e-58 229.6 212 58.5
Nn1g09651 Nelumbo nucifera HOM05D004498 ORTHO05D005300 9.6e-58 227.6 222 60.4
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 4.8e-57 225.3 213 58.2
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 4.8e-57 225.3 216 58.3
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.8e-56 223.4 190 65.3
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 9.0e-56 221.1 215 58.1
PGR119G0143 Punica granatum HOM05D004498 ORTHO05D005300 9.0e-56 221.1 217 61.3
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 5.8e-55 218.4 223 58.3
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 8.4e-54 214.5 189 66.1
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 2.4e-53 213.0 199 57.8
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 5.5e-53 211.8 229 54.1
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 1.6e-52 210.3 217 54.8
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 2.1e-52 209.9 217 59.0
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.7e-52 209.5 206 58.7
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 5.1e-51 205.3 211 55.9
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 6.7e-51 204.9 211 55.9
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 3.3e-50 202.6 216 53.7
SGA_v2.0_scaffold92G28289 Striga asiatica HOM05D004498 ORTHO05D005300 9.6e-50 201.1 155 71.6
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 1.6e-49 200.3 216 53.2
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 6.2e-49 198.4 219 53.0
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 1.4e-48 197.2 153 71.2
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 4.0e-48 195.7 217 53.5
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 7.6e-47 191.4 218 50.9
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.7e-46 190.3 190 58.9
CDE02G4122 Ceratophyllum demersum HOM05D004498 ORTHO05D005300 3.8e-46 189.1 189 60.3
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 8.4e-46 188.0 217 51.2
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 7.1e-45 184.9 160 62.5
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 7.1e-45 184.9 160 62.5
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.7e-44 183.0 238 48.7
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 4.6e-44 182.2 224 50.4
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 1.0e-43 181.0 158 62.7
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 2.3e-43 179.9 191 51.8
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 3.1e-40 169.5 220 46.8
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 1.4e-37 160.6 238 48.3
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 7.9e-36 154.8 219 43.8
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 7.9e-36 154.8 238 44.1
SMO200G0031 Selaginella moellendorffii HOM05D004498 ORTHO05D005300 7.4e-34 148.3 214 40.2
Oeu022469.1 Olea europaea HOM05D004498 ORTHO05D005300 2.2e-30 136.7 72 91.7
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 3.2e-29 132.9 143 56.6
Sabra03G0074300 Salix brachista HOM05D004498 ORTHO05D005300 3.2e-29 132.9 173 49.1
BcaC06g32419 Brassica carinata HOM05D004498 ORTHO05D005300 9.4e-29 131.3 141 53.2
SEGI_20056 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 3.6e-28 129.4 154 48.7
AUR62038145 Chenopodium quinoa HOM05D004498 ORTHO05D005300 1.4e-27 127.5 146 51.4
CARHR205520 Cardamine hirsuta HOM05D004498 ORTHO05D005300 8.8e-27 124.8 72 80.6
Rhsim07G0010200 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.4e-24 117.5 75 76.0
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis HOM05D004498 ORTHO05D005300 1.8e-24 117.1 214 38.3
arahy.Tifrunner.gnm1.ann1.XAT8RN Arachis hypogaea HOM05D004498 ORTHO05D005300 5.9e-23 112.1 69 76.8
Migut.G01109 Erythranthe guttata HOM05D004498 ORTHO05D005300 2.9e-22 109.8 110 58.2
PGSC0003DMG401007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 5.0e-22 109.0 97 64.9
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 4.2e-21 105.9 353 29.2
Potri.003G107501 Populus trichocarpa HOM05D004498 ORTHO05D005300 5.7e-18 95.5 67 73.1
Cre11.g467726 Chlamydomonas reinhardtii HOM05D004498 ORTHO05D005300 9.7e-18 94.7 246 30.1
Prupe.6G034800 Prunus persica HOM05D004498 ORTHO05D005300 7.0e-16 88.6 56 78.6
SalBow8G0163 Salvia bowleyana HOM05D004498 ORTHO05D005300 2.6e-15 86.7 62 77.4
SalBow8G4260 Salvia bowleyana HOM05D004498 ORTHO05D005300 2.6e-15 86.7 62 77.4
BcaNung06188 Brassica carinata HOM05D004498 ORTHO05D005300 8.5e-14 81.6 68 58.8
MCO14G174 Micromonas commoda HOM05D004498 ORTHO05D005300 2.5e-13 80.1 205 28.3
Rhsim07G0010100 Rhododendron simsii HOM05D004498 ORTHO05D005300 2.3e-11 73.6 81 54.3
PRCOL_00001376 Prasinoderma coloniale HOM05D004498 ORTHO05D005300 5.2e-11 72.4 271 27.7
CSS0021260 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 5.7e-10 68.9 53 66.0
Lj3g0020155 Lotus japonicus HOM05D004498 ORTHO05D005300 1.2e-07 61.2 61 59.0
SGA_v2.0_scaffold4035G54420 Striga asiatica HOM05D004498 ORTHO05D005300 2.7e-07 60.1 56 58.9
PGR142G0681 Punica granatum HOM05D004498 ORTHO05D005300 8.5e-06 55.1 52 63.5
SEGI_08016 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 8.5e-06 55.1 61 50.8
SEGI_20600 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 8.5e-06 55.1 61 50.8


User provided reference genes

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