Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 5.9e-129 464.2 226 100.0
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 2.0e-100 369.4 226 76.5
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 5.8e-100 367.9 223 78.5
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 1.3e-99 366.7 223 78.0
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 1.7e-99 366.3 226 75.2
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 1.4e-98 363.2 226 74.3
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 9.2e-98 360.5 226 74.8
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 1.2e-97 360.1 222 75.7
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 1.6e-97 359.8 225 74.2
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 1.6e-97 359.8 224 74.1
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 3.5e-97 358.6 220 76.4
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 4.6e-97 358.2 226 75.2
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 7.8e-97 357.5 226 74.3
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.7e-96 356.3 223 74.0
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 2.3e-96 355.9 220 75.9
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 3.0e-96 355.5 225 73.3
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 9.5e-95 350.5 224 71.9
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 2.1e-94 349.4 224 70.5
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 6.2e-94 347.8 216 73.6
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 1.8e-93 346.3 243 67.1
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 5.2e-93 344.7 217 72.8
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 6.8e-93 344.4 224 70.5
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 8.9e-93 344.0 216 72.2
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 1.5e-92 343.2 225 71.6
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 1.5e-92 343.2 217 73.3
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 2.0e-92 342.8 224 71.0
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 2.6e-92 342.4 224 69.2
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 3.4e-92 342.0 224 71.4
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 3.4e-92 342.0 224 71.4
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 4.4e-92 341.7 217 74.7
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 5.8e-92 341.3 216 73.1
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 5.8e-92 341.3 216 72.2
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 7.6e-92 340.9 224 70.5
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 2.2e-91 339.3 222 71.2
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 2.2e-91 339.3 217 71.4
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 4.9e-91 338.2 221 71.0
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 4.9e-91 338.2 225 71.6
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 8.3e-91 337.4 217 71.0
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 8.3e-91 337.4 217 71.4
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 1.1e-90 337.0 222 70.7
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 1.4e-90 336.7 216 71.8
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 2.4e-90 335.9 225 70.7
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 2.4e-90 335.9 220 71.4
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 2.4e-90 335.9 221 71.0
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.4e-90 335.9 221 74.2
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 2.4e-90 335.9 217 71.9
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 3.2e-90 335.5 225 71.1
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 5.4e-90 334.7 216 71.8
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 7.1e-90 334.3 217 71.0
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 1.2e-89 333.6 225 68.4
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 1.2e-89 333.6 218 71.6
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 1.6e-89 333.2 217 71.4
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 2.1e-89 332.8 217 70.0
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 2.1e-89 332.8 247 64.8
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 4.6e-89 331.6 225 70.2
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 7.8e-89 330.9 227 71.4
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 1.3e-88 330.1 221 72.9
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 1.3e-88 330.1 217 69.6
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 1.7e-88 329.7 217 69.1
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.3e-88 329.3 221 72.4
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 6.6e-88 327.8 217 69.1
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 8.6e-88 327.4 217 70.0
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 1.9e-87 326.2 217 70.0
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 4.3e-87 325.1 217 69.6
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 5.6e-87 324.7 217 69.6
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 9.6e-87 323.9 200 75.0
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 1.2e-86 323.6 216 69.4
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 1.2e-86 323.6 215 72.6
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 2.8e-86 322.4 217 67.7
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 3.6e-86 322.0 215 68.4
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 4.7e-86 321.6 217 68.2
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.4e-85 320.1 264 62.5
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 6.8e-85 317.8 217 69.1
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 8.9e-85 317.4 185 81.6
Oeu022464.1 Olea europaea HOM05D005379 ORTHO05D006661 2.0e-84 316.2 166 92.8
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 2.6e-84 315.8 217 66.4
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 2.6e-84 315.8 217 67.7
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 3.4e-84 315.5 205 70.7
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 4.4e-84 315.1 192 78.1
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 5.8e-84 314.7 217 67.3
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 1.7e-83 313.2 217 67.7
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.7e-83 313.2 273 59.7
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.2e-83 312.8 221 65.2
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 2.2e-83 312.8 215 66.0
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 3.8e-83 312.0 217 65.9
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 8.4e-83 310.8 187 78.1
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 4.2e-82 308.5 185 78.9
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 1.2e-81 307.0 193 75.1
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 1.6e-81 306.6 189 73.5
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 6.0e-81 304.7 247 60.7
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 6.6e-80 301.2 203 69.5
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.5e-79 300.1 187 72.7
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 4.3e-79 298.5 190 70.5
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 9.6e-79 297.4 187 73.3
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 6.2e-78 294.7 187 71.1
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 6.2e-78 294.7 185 76.8
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 1.8e-77 293.1 217 63.6
Peaxi162Scf00167g00730 Petunia axillaris HOM05D005379 ORTHO05D006661 1.1e-74 283.9 164 81.7
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.4e-74 283.5 189 72.0
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 1.9e-74 283.1 164 78.7
Peaxi162Scf00304g01113 Petunia axillaris HOM05D005379 ORTHO05D006661 6.0e-73 278.1 164 79.3
Hma1.2p1_0456F.1_g156820 Hydrangea macrophylla HOM05D005379 ORTHO05D006661 1.1e-71 273.9 197 68.0
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 1.3e-70 270.4 185 65.9
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 1.3e-70 270.4 185 65.9
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 2.1e-70 269.6 185 65.9
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 2.1e-70 269.6 185 65.9
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 2.1e-70 269.6 272 52.9
Zm00001eb105230 Zea mays HOM05D005379 ORTHO05D006661 1.2e-68 263.8 167 72.5
Cpa.g.sc13.263 Carica papaya HOM05D005379 ORTHO05D006661 2.1e-65 253.1 152 77.0
TPR.G9516 Trifolium pratense HOM05D005379 ORTHO05D006661 1.3e-62 243.8 158 70.3
Manes.06G131601 Manihot esculenta HOM05D005379 ORTHO05D006661 3.1e-61 239.2 245 51.8
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 2.2e-59 233.0 210 51.9
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 7.1e-58 228.0 209 50.2
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 4.6e-57 225.3 210 50.0
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.8e-54 216.1 155 64.5
CANSAT56G1106 Cannabis sativa HOM05D005379 ORTHO05D006661 3.7e-54 215.7 136 74.3
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 2.2e-51 206.5 212 43.9
unitig_0.g2509 Utricularia gibba HOM05D005379 ORTHO05D006661 2.3e-48 196.4 119 79.8
BcaB05g24017 Brassica carinata HOM05D005379 ORTHO05D006661 2.5e-47 193.0 162 60.5
SMO361G0220 Selaginella moellendorffii HOM05D005379 ORTHO05D006661 8.2e-46 188.0 198 44.9
CANSAT56G1775 Cannabis sativa HOM05D005379 ORTHO05D006661 1.7e-43 180.3 105 79.0
Lalb_Chr16g0382791 Lupinus albus HOM05D005379 ORTHO05D006661 2.6e-31 139.8 87 71.3
MCO01G548 Micromonas commoda HOM05D005379 ORTHO05D006661 3.5e-28 129.4 189 34.9
Ah.13g066320 Amaranthus hybridus HOM05D005379 ORTHO05D006661 4.2e-26 122.5 129 55.0
A02p12440 Brassica napus HOM05D005379 ORTHO05D006661 2.0e-23 113.6 80 63.8
BraA02t06308Z Brassica rapa HOM05D005379 ORTHO05D006661 9.7e-23 111.3 80 63.8
BcaC03g14620 Brassica carinata HOM05D005379 ORTHO05D006661 3.1e-21 106.3 82 56.1
Dinv06594 Davidia involucrata HOM05D005379 ORTHO05D006661 7.0e-21 105.1 69 66.7
Cre01.g052050 Chlamydomonas reinhardtii HOM05D005379 ORTHO05D006661 1.6e-20 104.0 193 33.7
BolC2t08192H Brassica oleracea HOM05D005379 ORTHO05D006661 4.2e-18 95.9 70 61.4
Lalb_Chr16g0382801 Lupinus albus HOM05D005379 ORTHO05D006661 2.1e-17 93.6 86 53.5
HPP92_009967 Vanilla planifolia HOM05D005379 ORTHO05D006661 3.6e-17 92.8 83 50.6
Ah.13g066300 Amaranthus hybridus HOM05D005379 ORTHO05D006661 7.7e-12 75.1 51 64.7
SEGI_00850 Sequoiadendron giganteum HOM05D005379 ORTHO05D006661 2.5e-10 70.1 47 68.1
HPP92_009968 Vanilla planifolia HOM05D005379 ORTHO05D006661 2.5e-10 70.1 40 80.0
C02p20560 Brassica napus HOM05D005379 ORTHO05D006661 3.4e-07 59.7 52 51.9
RcHm_v2.0_Chr1g0373801 Rosa chinensis HOM05D005379 ORTHO05D006661 4.9e-06 55.8 34 73.5


User provided reference genes

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