Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 6.1e-282 973.4 460 100.0
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 2.2e-255 885.2 460 89.1
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.9e-254 882.1 460 88.7
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 1.4e-249 865.9 460 87.8
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 8.9e-249 863.2 460 86.5
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 5.4e-246 854.0 460 85.7
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 9.2e-246 853.2 460 85.0
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 3.0e-244 848.2 460 84.6
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.2e-242 842.8 460 83.0
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 4.7e-242 840.9 460 83.9
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 6.2e-242 840.5 460 83.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 6.2e-242 840.5 460 83.7
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.4e-241 839.3 475 80.6
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 4.0e-241 837.8 460 83.5
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.8e-241 837.0 460 84.3
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.8e-241 837.0 460 84.3
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 8.9e-241 836.6 461 83.1
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.5e-240 835.9 460 83.5
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.6e-240 835.1 460 83.3
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 2.6e-240 835.1 460 82.0
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 3.4e-240 834.7 461 83.1
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 4.4e-240 834.3 460 82.8
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 5.8e-240 833.9 461 83.3
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 9.9e-240 833.2 460 82.8
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.7e-239 832.4 460 83.9
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.2e-239 832.0 460 83.3
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 2.9e-239 831.6 462 83.3
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.4e-239 830.5 460 82.8
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 1.1e-238 829.7 460 82.4
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.4e-238 829.3 460 82.6
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 2.4e-238 828.6 460 81.7
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 2.4e-238 828.6 461 82.4
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.4e-238 827.4 461 82.4
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 5.4e-238 827.4 460 81.7
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 9.2e-238 826.6 460 82.0
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.1e-237 825.5 461 82.6
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 4.6e-237 824.3 460 81.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 4.6e-237 824.3 460 82.2
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.8e-237 823.5 461 82.2
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 7.8e-237 823.5 460 82.2
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 7.8e-237 823.5 460 84.1
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.0e-236 823.2 460 83.0
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 8.6e-236 820.1 460 80.7
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.1e-235 819.7 460 83.9
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 2.5e-235 818.5 459 80.8
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 2.5e-235 818.5 462 81.6
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 3.3e-235 818.1 461 81.3
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 5.6e-235 817.4 460 80.2
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 5.6e-235 817.4 460 80.9
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 7.3e-235 817.0 460 80.7
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 9.6e-235 816.6 460 80.9
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 9.6e-235 816.6 460 80.7
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.2e-234 816.2 481 78.6
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 2.1e-234 815.5 458 81.0
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 2.8e-234 815.1 460 80.9
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 6.8e-233 810.4 460 80.0
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 6.8e-233 810.4 460 80.0
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.2e-232 809.7 460 79.8
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.2e-232 809.7 460 79.8
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.9e-231 805.1 461 78.1
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.1e-230 803.1 460 80.4
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 4.2e-230 801.2 460 80.7
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 5.1e-228 794.3 462 77.5
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.9e-227 792.3 460 78.3
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 9.6e-227 790.0 460 78.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 9.6e-227 790.0 460 78.3
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.3e-226 789.6 453 78.4
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.6e-226 789.3 460 78.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 2.4e-225 785.4 460 77.6
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 3.4e-224 781.6 443 78.8
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 4.4e-224 781.2 460 77.6
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 5.8e-224 780.8 487 74.7
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.2e-221 773.1 460 77.8
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 7.9e-221 770.4 458 76.0
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 4.8e-218 761.1 460 77.2
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 3.1e-217 758.4 460 76.1
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 1.5e-216 756.1 498 71.3
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.3e-215 753.1 460 74.8
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 5.5e-214 747.7 460 75.7
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 3.9e-212 741.5 458 73.1
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.5e-208 729.6 469 71.0
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.9e-206 722.6 460 72.8
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 5.3e-193 677.9 499 64.5
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.4e-192 675.2 460 68.9
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.3e-186 656.8 451 65.4
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 6.3e-186 654.4 458 67.9
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.4e-185 652.5 451 65.2
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 3.4e-184 648.7 394 75.6
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 4.5e-184 648.3 454 64.3
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 6.5e-183 644.4 337 89.9
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-182 643.7 456 63.8
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 3.5e-176 622.1 341 84.8
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.1e-174 617.1 342 84.5
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.1e-174 617.1 342 84.5
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.1e-174 617.1 338 85.5
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 1.5e-174 616.7 462 59.3
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.8e-172 609.8 337 85.8
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-172 609.4 339 84.1
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.8e-172 607.4 339 84.1
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.5e-171 604.4 338 84.3
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 9.7e-171 604.0 321 87.9
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.3e-167 593.6 338 82.5
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.8e-161 573.2 311 85.2
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 5.4e-161 571.6 461 54.9
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 9.5e-158 560.8 291 89.7
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.5e-155 553.5 300 87.7
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 2.6e-155 552.7 337 80.7
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.9e-150 536.6 313 82.7
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.0e-139 500.0 291 79.7
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.7e-138 496.9 277 80.1
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 3.6e-133 479.2 338 63.3
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.5e-128 462.6 280 75.4
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 5.8e-107 392.1 450 40.7
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 2.2e-98 363.6 486 38.1
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.2e-77 293.9 163 80.4
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.7e-54 215.3 110 89.1
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.7e-54 215.3 110 89.1
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-53 214.2 110 88.2
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.3e-50 204.9 185 56.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 2.3e-39 167.5 96 83.3
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 2.5e-09 67.8 40 75.0


User provided reference genes

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