Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 5.6e-300 1033.5 520 100.0
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 6.7e-176 621.3 520 63.3
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 6.9e-173 611.3 519 62.4
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 2.8e-166 589.3 520 59.8
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 1.8e-165 586.6 523 60.0
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 3.3e-151 539.3 484 58.7
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 1.8e-149 533.5 528 54.9
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.1e-146 524.2 519 54.5
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 1.9e-146 523.5 524 56.3
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 3.2e-146 522.7 480 58.1
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 5.5e-146 521.9 520 54.6
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.6e-145 520.4 519 54.3
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 1.6e-145 520.4 524 55.3
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 4.7e-145 518.8 521 53.9
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 3.3e-143 512.7 528 53.8
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 1.7e-142 510.4 521 53.6
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 1.2e-140 504.2 523 50.1
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 7.7e-140 501.5 525 52.8
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 2.2e-139 500.0 522 53.4
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 7.2e-138 495.0 522 52.7
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 1.0e-136 491.1 522 52.3
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 1.4e-136 490.7 525 51.6
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 5.2e-136 488.8 519 51.8
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 8.8e-136 488.0 521 50.7
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 1.5e-135 487.3 504 51.6
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 2.2e-134 483.4 556 50.5
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 3.7e-134 482.6 524 51.9
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 1.1e-133 481.1 522 51.0
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 1.2e-132 477.6 528 50.2
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 1.3e-131 474.2 521 50.7
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 5.0e-131 472.2 522 50.2
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 5.0e-131 472.2 466 54.9
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.9e-130 470.3 485 50.3
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 3.2e-130 469.5 609 45.8
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 1.6e-129 467.2 522 50.0
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 1.0e-128 464.5 575 48.9
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 1.0e-128 464.5 455 52.5
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 1.4e-128 464.2 529 49.3
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.2e-127 461.1 522 49.8
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 2.0e-127 460.3 526 49.0
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 4.4e-127 459.1 522 49.4
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 7.5e-127 458.4 525 49.9
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 8.3e-126 454.9 532 49.1
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 8.3e-126 454.9 522 49.6
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.1e-125 454.5 492 50.6
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 2.0e-124 450.3 523 48.0
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 8.5e-123 444.9 519 47.8
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 1.5e-122 444.1 557 47.4
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 8.0e-121 438.3 525 47.2
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 1.2e-119 434.5 523 46.8
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 4.4e-119 432.6 530 46.4
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 5.7e-119 432.2 575 45.0
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 4.9e-118 429.1 502 48.4
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 6.3e-118 428.7 502 48.4
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 1.1e-117 427.9 455 48.6
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 1.1e-117 427.9 446 53.1
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 1.4e-117 427.6 523 46.7
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 1.4e-117 427.6 520 46.0
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 4.1e-117 426.0 468 50.2
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 4.1e-117 426.0 526 47.9
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 7.0e-117 425.2 502 48.0
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 7.0e-117 425.2 469 49.9
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 1.2e-116 424.5 452 51.3
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 1.2e-116 424.5 451 49.9
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 2.7e-116 423.3 501 46.9
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 5.9e-116 422.2 479 49.3
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 5.9e-116 422.2 393 57.0
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 5.9e-116 422.2 524 44.8
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 1.3e-115 421.0 522 44.6
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 2.9e-115 419.9 482 48.5
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 8.6e-115 418.3 527 47.1
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 3.3e-114 416.4 481 49.1
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 4.3e-114 416.0 454 47.6
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 5.6e-114 415.6 517 45.1
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 7.3e-114 415.2 476 48.7
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 7.3e-114 415.2 523 44.6
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 1.2e-113 414.5 484 45.7
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 3.6e-113 412.9 498 48.2
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 1.8e-112 410.6 524 44.1
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 1.8e-112 410.6 489 47.6
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 1.2e-111 407.9 452 50.0
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 3.4e-111 406.4 452 49.6
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 3.4e-111 406.4 452 50.0
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 3.4e-111 406.4 452 49.6
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 1.3e-110 404.4 449 50.1
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 6.4e-110 402.1 489 48.1
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 4.6e-108 396.0 356 56.7
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 3.3e-106 389.8 447 48.1
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 1.8e-104 384.0 500 42.6
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 4.4e-103 379.4 482 45.0
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 8.6e-99 365.2 453 47.2
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 5.6e-98 362.5 370 51.9
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 6.2e-97 359.0 378 47.6
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 2.3e-91 340.5 470 41.9
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 4.7e-89 332.8 406 45.6
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 1.7e-86 324.3 382 46.6
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 4.9e-86 322.8 300 56.7
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 1.1e-85 321.6 531 37.9
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 1.7e-83 314.3 458 42.1
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 3.9e-83 313.2 320 54.1
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 4.0e-80 303.1 204 77.0
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 2.6e-79 300.4 521 38.6
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 5.4e-69 266.2 450 35.8
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.1e-56 225.3 278 46.4
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 4.0e-56 223.4 192 63.0
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 5.5e-53 213.0 284 45.1
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 3.3e-50 203.8 474 32.7
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 5.7e-50 203.0 478 31.0
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 3.7e-49 200.3 284 40.1
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 5.5e-45 186.4 474 29.3
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 2.1e-44 184.5 142 64.8
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 7.9e-44 182.6 437 29.5
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 1.0e-43 182.2 225 45.3
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 4.6e-36 156.8 141 54.6
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 3.3e-34 150.6 272 34.9
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 4.1e-32 143.7 119 62.2
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 4.1e-32 143.7 125 59.2
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 3.8e-30 137.1 275 32.7
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 1.8e-27 128.3 272 31.2
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.5e-26 125.2 142 45.1
CBR_g31943 Chara braunii HOM05D006020 ORTHO05D007665 2.5e-13 81.3 68 55.9
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.1e-12 78.2 99 38.4
PRCOL_00001532 Prasinoderma coloniale HOM05D006020 ORTHO05D007665 2.7e-12 77.8 195 28.7
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.3e-11 74.7 90 40.0
TAR362G0264 Trochodendron aralioides HOM05D006020 ORTHO05D007665 4.1e-08 63.9 101 31.7
Cpa.g.sc8.168 Carica papaya HOM05D006020 ORTHO05D007665 2.7e-07 61.2 137 29.9
MCO16G349 Micromonas commoda HOM05D006020 ORTHO05D007665 1.0e-06 59.3 67 43.3
Os02g0515000 Oryza sativa ssp. japonica HOM05D006020 ORTHO05D007665 2.9e-06 57.8 152 25.7


User provided reference genes

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