Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 6.4e-190 667.2 315 100.0
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 5.7e-130 468.0 315 71.1
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 5.3e-128 461.5 314 69.7
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 5.9e-119 431.4 314 66.9
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 1.0e-118 430.6 316 67.1
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.9e-117 426.4 315 67.3
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 7.2e-117 424.5 320 64.4
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 9.5e-117 424.1 320 65.3
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 1.6e-116 423.3 321 63.9
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 1.8e-115 419.9 315 65.1
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 1.8e-115 419.9 317 65.9
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 4.0e-115 418.7 320 65.3
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 8.8e-115 417.5 322 63.7
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 8.8e-115 417.5 320 63.8
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 8.8e-115 417.5 317 64.7
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 8.8e-115 417.5 320 63.8
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 1.2e-114 417.2 318 64.5
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 1.2e-114 417.2 320 63.8
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 2.6e-114 416.0 316 65.2
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 2.6e-114 416.0 319 65.2
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 4.4e-114 415.2 318 64.2
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 4.4e-114 415.2 315 65.4
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 4.4e-114 415.2 321 64.5
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 1.7e-113 413.3 316 65.5
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 2.2e-113 412.9 318 65.1
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 2.8e-113 412.5 318 64.2
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 6.3e-113 411.4 320 62.8
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 6.3e-113 411.4 321 64.5
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 8.3e-113 411.0 333 62.5
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 1.4e-112 410.2 319 64.3
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 1.8e-112 409.8 319 62.1
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 2.4e-112 409.5 318 61.9
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 2.4e-112 409.5 316 63.9
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 1.2e-111 407.1 314 63.7
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 7.8e-111 404.4 317 61.8
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 1.3e-110 403.7 318 62.3
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 1.3e-110 403.7 319 63.6
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 3.8e-110 402.1 355 57.5
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 1.1e-109 400.6 316 63.0
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 1.9e-109 399.8 314 63.4
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 3.3e-109 399.1 315 62.5
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 3.3e-109 399.1 314 63.4
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 7.3e-109 397.9 314 62.7
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 7.3e-109 397.9 322 61.5
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 1.6e-108 396.7 313 61.3
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 2.8e-108 396.0 315 62.2
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 3.6e-108 395.6 317 60.6
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 8.0e-108 394.4 316 61.7
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 8.0e-108 394.4 318 60.1
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 8.0e-108 394.4 319 62.4
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.8e-107 393.3 314 63.1
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 3.0e-107 392.5 321 60.7
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 6.8e-107 391.3 315 62.2
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 1.2e-106 390.6 314 60.5
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 4.4e-106 388.7 313 60.7
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 5.7e-106 388.3 317 61.2
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 7.5e-106 387.9 313 60.1
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 7.5e-106 387.9 363 55.6
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 9.8e-106 387.5 313 60.1
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 1.3e-105 387.1 313 58.8
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 3.7e-105 385.6 315 60.0
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 3.7e-105 385.6 313 61.3
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 8.3e-105 384.4 320 60.9
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 1.4e-104 383.6 313 60.1
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 2.4e-104 382.9 313 60.4
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 4.1e-104 382.1 325 58.2
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 4.1e-104 382.1 313 60.1
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 7.0e-104 381.3 316 59.8
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 9.2e-104 380.9 313 58.8
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 1.2e-103 380.6 318 60.4
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 1.7e-102 376.7 316 57.6
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 2.3e-102 376.3 320 59.4
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 3.0e-102 375.9 313 59.1
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 8.6e-102 374.4 325 57.2
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 1.5e-101 373.6 237 74.7
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.1e-99 367.5 272 67.6
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 2.3e-99 366.3 325 56.6
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 2.3e-99 366.3 317 56.2
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 2.3e-99 366.3 290 61.7
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 1.7e-97 360.1 318 57.5
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 1.4e-96 357.1 319 58.0
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 2.3e-94 349.7 238 71.4
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 6.6e-94 348.2 253 69.2
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 5.6e-93 345.1 320 55.3
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 2.3e-91 339.7 333 54.7
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 5.8e-90 335.1 323 55.4
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 1.4e-88 330.5 224 67.4
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 2.4e-88 329.7 325 52.6
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 1.2e-87 327.4 237 69.6
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 4.3e-85 318.9 322 53.4
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 2.1e-84 316.6 237 65.4
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 2.8e-84 316.2 314 53.5
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 3.6e-84 315.8 333 53.8
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 1.2e-79 300.8 315 53.3
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 6.6e-78 295.0 313 50.8
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 3.3e-77 292.7 312 48.7
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 1.6e-76 290.4 310 47.4
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 4.0e-75 285.8 318 47.5
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 2.0e-74 283.5 328 49.4
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 1.7e-73 280.4 317 50.8
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 5.4e-72 275.4 251 53.0
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 3.0e-70 269.6 240 55.4
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 5.1e-70 268.9 248 57.3
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 6.6e-70 268.5 175 69.1
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 7.3e-69 265.0 285 49.5
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 1.3e-68 264.2 209 61.2
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 7.9e-63 245.0 178 71.9
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 8.1e-60 235.0 156 67.3
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 3.4e-58 229.6 175 67.4
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 9.9e-58 228.0 224 50.9
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 2.1e-55 220.3 130 77.7
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 3.5e-55 219.5 160 66.9
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.3e-52 211.1 316 40.2
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 1.9e-45 187.2 142 60.6
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 3.1e-43 179.9 144 58.3
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 1.5e-42 177.6 144 63.9
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 3.4e-42 176.4 225 42.7
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 5.1e-38 162.5 232 41.4
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 2.2e-36 157.1 423 27.9
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 1.1e-35 154.8 237 39.7
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 2.6e-34 150.2 115 62.6
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 5.5e-32 142.5 314 33.4
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.6e-31 141.0 171 48.5
SGA_v2.0_scaffold37G14914 Striga asiatica HOM05D005657 ORTHO05D007104 3.9e-22 109.8 74 73.0
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 7.4e-21 105.5 67 68.7
Glyma.08G293333 Glycine max HOM05D005657 ORTHO05D007104 1.5e-13 81.3 51 70.6
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 4.4e-13 79.7 54 70.4
TPR.G7274 Trifolium pratense HOM05D005657 ORTHO05D007104 8.2e-12 75.5 56 60.7
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 7.0e-11 72.4 47 66.0
SGA_v2.0_scaffold119G32786 Striga asiatica HOM05D005657 ORTHO05D007104 1.6e-07 61.2 31 87.1
CSS0012720 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 2.7e-07 60.5 36 72.2
Duzib160G0546 Durio zibethinus HOM05D005657 ORTHO05D007104 2.7e-07 60.5 43 58.1
MCO01G569 Micromonas commoda HOM05D005657 ORTHO05D007104 1.4e-06 58.2 42 61.9
SGA_v2.0_scaffold118G32549 Striga asiatica HOM05D005657 ORTHO05D007104 1.4e-06 58.2 43 65.1


User provided reference genes

Program Settings