Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 3.9e-127 458.0 208 100.0
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 2.7e-80 302.4 221 65.6
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 3.6e-80 302.0 226 63.3
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.0e-79 300.4 235 63.8
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.5e-78 296.6 227 61.7
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 1.3e-77 293.5 223 64.6
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 2.8e-77 292.4 223 64.1
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 6.3e-77 291.2 223 61.9
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 1.1e-76 290.4 170 79.4
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 1.8e-76 289.7 220 63.2
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 7.0e-76 287.7 221 64.7
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 3.5e-75 285.4 215 65.1
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 4.5e-75 285.0 220 62.7
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.5e-75 285.0 219 63.5
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.5e-75 285.0 219 63.5
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 4.5e-75 285.0 221 65.2
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 5.9e-75 284.6 218 62.4
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.0e-74 283.9 224 61.2
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 1.3e-74 283.5 223 64.1
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 6.5e-74 281.2 223 63.2
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 6.5e-74 281.2 219 63.0
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.1e-73 280.4 223 62.3
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.5e-73 279.3 223 61.9
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 2.5e-73 279.3 224 63.8
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 3.2e-73 278.9 219 65.3
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 3.2e-73 278.9 223 62.8
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 4.2e-73 278.5 226 61.1
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 4.2e-73 278.5 225 62.7
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 9.4e-73 277.3 218 61.0
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 9.4e-73 277.3 226 61.1
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 9.4e-73 277.3 220 61.4
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.2e-72 276.9 220 61.8
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 1.6e-72 276.6 223 60.5
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 2.1e-72 276.2 220 61.8
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 3.6e-72 275.4 218 62.4
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 4.7e-72 275.0 219 62.1
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 4.7e-72 275.0 227 60.4
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 6.1e-72 274.6 220 62.3
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 6.1e-72 274.6 262 55.0
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.0e-71 273.9 220 61.8
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 2.3e-71 272.7 225 61.8
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 3.0e-71 272.3 213 60.1
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 3.0e-71 272.3 213 60.1
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 4.0e-71 271.9 223 60.1
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 5.2e-71 271.6 218 59.6
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 5.2e-71 271.6 220 61.8
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 6.8e-71 271.2 220 59.5
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 2.6e-70 269.2 220 61.4
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 4.4e-70 268.5 228 58.3
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 5.7e-70 268.1 215 60.0
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 5.7e-70 268.1 219 60.3
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 7.5e-70 267.7 219 61.2
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 7.5e-70 267.7 219 61.6
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 1.7e-69 266.5 221 57.9
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 2.8e-69 265.8 225 60.4
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 2.8e-69 265.8 224 58.9
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 1.1e-68 263.8 222 59.0
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.4e-68 263.5 214 59.8
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 3.1e-68 262.3 216 59.7
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 4.1e-68 261.9 217 61.8
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 4.1e-68 261.9 221 58.8
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 5.4e-68 261.5 215 61.4
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 1.2e-67 260.4 215 60.9
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 1.2e-67 260.4 222 59.5
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.6e-67 260.0 224 56.7
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 2.0e-67 259.6 217 58.5
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 2.7e-67 259.2 215 59.1
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 2.7e-67 259.2 226 58.4
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 5.9e-67 258.1 216 60.6
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 5.9e-67 258.1 222 59.5
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 7.7e-67 257.7 210 59.5
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 7.7e-67 257.7 221 58.4
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.3e-66 256.9 221 58.4
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 1.7e-66 256.5 217 57.1
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 2.9e-66 255.8 186 66.7
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 8.6e-66 254.2 217 56.2
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 2.5e-65 252.7 289 48.1
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.6e-64 248.8 232 56.9
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 4.7e-64 248.4 218 59.2
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 2.0e-62 243.0 207 57.5
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 2.6e-62 242.7 174 64.9
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 2.6e-62 242.7 188 64.4
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 5.7e-62 241.5 188 62.8
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 1.3e-61 240.4 227 53.7
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.8e-61 239.2 191 62.3
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.7e-61 238.8 187 62.0
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 4.9e-61 238.4 169 65.7
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 8.3e-61 237.7 228 53.1
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 5.4e-60 235.0 188 61.2
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 9.2e-60 234.2 219 52.1
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 7.8e-59 231.1 240 49.2
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 3.8e-58 228.8 216 51.9
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 8.6e-58 227.6 262 48.5
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 1.5e-57 226.9 168 63.1
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 1.9e-57 226.5 168 63.7
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 5.6e-57 224.9 168 63.7
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.2e-56 223.8 186 59.7
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 3.6e-56 222.2 186 56.5
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 2.3e-55 219.5 173 59.5
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 2.3e-55 219.5 173 59.5
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 4.0e-55 218.8 187 58.3
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 4.0e-55 218.8 203 56.2
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 1.2e-54 217.2 169 60.9
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 1.3e-53 213.8 184 56.5
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 3.7e-53 212.2 174 60.3
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 3.7e-53 212.2 159 62.9
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 3.2e-52 209.1 186 54.3
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 7.0e-52 208.0 214 47.2
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 7.0e-52 208.0 128 71.1
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 4.3e-49 198.7 197 55.3
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 5.6e-49 198.4 133 64.7
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 2.0e-46 189.9 191 49.7
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 1.4e-39 167.2 193 45.6
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.5e-38 163.7 222 39.6
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 1.3e-37 160.6 83 74.7
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 5.6e-33 145.2 72 73.6
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 3.1e-07 59.7 61 36.1


User provided reference genes

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