Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042406.1 Olea europaea HOM05D003826 ORTHO05D004479 1.9e-104 382.5 190 100.0
Cc02_g20920 Coffea canephora HOM05D003826 ORTHO05D004479 4.4e-85 318.2 190 81.1
Manes.07G038200 Manihot esculenta HOM05D003826 ORTHO05D004479 2.4e-83 312.4 186 80.1
Migut.B00552 Erythranthe guttata HOM05D003826 ORTHO05D004479 1.0e-81 307.0 190 79.5
MSTRG.27816 Avicennia marina HOM05D003826 ORTHO05D004479 1.7e-81 306.2 187 79.1
MSTRG.20281 Avicennia marina HOM05D003826 ORTHO05D004479 3.0e-81 305.4 173 84.4
Nitab4.5_0011038g0020 Nicotiana tabacum HOM05D003826 ORTHO05D004479 5.0e-81 304.7 187 78.6
Solyc01g105970.3 Solanum lycopersicum HOM05D003826 ORTHO05D004479 1.5e-80 303.1 187 78.6
Sopen01g048350 Solanum pennellii HOM05D003826 ORTHO05D004479 1.5e-80 303.1 187 78.6
PGSC0003DMG400033580 Solanum tuberosum HOM05D003826 ORTHO05D004479 1.5e-80 303.1 187 78.6
Hma1.2p1_0908F.1_g235485 Hydrangea macrophylla HOM05D003826 ORTHO05D004479 1.9e-80 302.8 172 87.2
Atru.chr6.1261 Acer truncatum HOM05D003826 ORTHO05D004479 4.3e-80 301.6 186 77.4
Gohir.A13G050900 Gossypium hirsutum HOM05D003826 ORTHO05D004479 4.3e-80 301.6 187 78.6
Atru.chr6.1269 Acer truncatum HOM05D003826 ORTHO05D004479 5.6e-80 301.2 186 77.4
MD05G1047400 Malus domestica HOM05D003826 ORTHO05D004479 7.3e-80 300.8 189 75.1
CAN.G997.2 Capsicum annuum HOM05D003826 ORTHO05D004479 9.5e-80 300.4 190 75.8
Ciclev10029337m.g Citrus clementina HOM05D003826 ORTHO05D004479 1.6e-79 299.7 187 76.5
Sed0006788 Sechium edule HOM05D003826 ORTHO05D004479 2.8e-79 298.9 184 77.2
Thecc.02G129300 Theobroma cacao HOM05D003826 ORTHO05D004479 2.8e-79 298.9 174 81.6
Gorai.013G055500 Gossypium raimondii HOM05D003826 ORTHO05D004479 4.7e-79 298.1 187 77.5
ClCG09G016080 Citrullus lanatus HOM05D003826 ORTHO05D004479 8.1e-79 297.4 188 74.5
Actinidia28031 Actinidia chinensis HOM05D003826 ORTHO05D004479 1.4e-78 296.6 173 84.4
Nitab4.5_0002017g0010 Nicotiana tabacum HOM05D003826 ORTHO05D004479 1.8e-78 296.2 173 80.3
Duzib052G0856 Durio zibethinus HOM05D003826 ORTHO05D004479 2.3e-78 295.8 186 78.0
Potri.017G043900 Populus trichocarpa HOM05D003826 ORTHO05D004479 2.3e-78 295.8 186 75.3
Nitab4.5_0008998g0010 Nicotiana tabacum HOM05D003826 ORTHO05D004479 4.0e-78 295.0 182 77.5
Prupe.8G069800 Prunus persica HOM05D003826 ORTHO05D004479 5.2e-78 294.7 175 78.3
Sabra17G0029800 Salix brachista HOM05D003826 ORTHO05D004479 5.2e-78 294.7 186 75.8
Eucgr.G00988 Eucalyptus grandis HOM05D003826 ORTHO05D004479 6.8e-78 294.3 187 75.9
HanXRQChr08g0227191 Helianthus annuus HOM05D003826 ORTHO05D004479 8.9e-78 293.9 173 80.3
TWI59G0852 Tripterygium wilfordii HOM05D003826 ORTHO05D004479 1.2e-77 293.5 185 76.2
Potri.017G043700 Populus trichocarpa HOM05D003826 ORTHO05D004479 1.5e-77 293.1 186 74.7
PGR042G0672 Punica granatum HOM05D003826 ORTHO05D004479 1.5e-77 293.1 189 74.6
TAR628G1674 Trochodendron aralioides HOM05D003826 ORTHO05D004479 1.5e-77 293.1 173 80.3
Rhsim05G0101900 Rhododendron simsii HOM05D003826 ORTHO05D004479 2.0e-77 292.7 173 82.1
TWI14G0912 Tripterygium wilfordii HOM05D003826 ORTHO05D004479 2.0e-77 292.7 187 74.3
CsaV3_7G006880 Cucumis sativus L. HOM05D003826 ORTHO05D004479 2.6e-77 292.4 188 73.4
THA.LOC104807183 Tarenaya hassleriana HOM05D003826 ORTHO05D004479 3.4e-77 292.0 190 74.2
unitig_37.g12793 Utricularia gibba HOM05D003826 ORTHO05D004479 3.4e-77 292.0 184 74.5
Cfa005734 Carpinus fangiana HOM05D003826 ORTHO05D004479 7.5e-77 290.8 187 74.9
CiPaw.05G029600 Carya illinoinensis HOM05D003826 ORTHO05D004479 7.5e-77 290.8 188 72.9
Nn1g05569 Nelumbo nucifera HOM05D003826 ORTHO05D004479 9.8e-77 290.4 175 79.4
vmacro19957 Vaccinium macrocarpon HOM05D003826 ORTHO05D004479 1.3e-76 290.0 173 81.5
Dinv24149 Davidia involucrata HOM05D003826 ORTHO05D004479 1.7e-76 289.7 168 85.1
ECA236G1467 Erigeron canadensis HOM05D003826 ORTHO05D000778 1.7e-76 289.7 173 79.8
FvH4_2g11710 Fragaria vesca HOM05D003826 ORTHO05D004479 1.7e-76 289.7 197 71.1
FAN24G2578 Fragaria x ananassa HOM05D003826 ORTHO05D004479 1.7e-76 289.7 197 71.1
MELO3C018606.2 Cucumis melo HOM05D003826 ORTHO05D004479 2.9e-76 288.9 190 73.2
QL11p025207 Quercus lobata HOM05D003826 ORTHO05D004479 3.7e-76 288.5 188 73.4
Sc18g0007060 Simmondsia chinensis HOM05D003826 ORTHO05D004479 3.7e-76 288.5 173 78.0
Carub.0003s2836 Capsella rubella HOM05D003826 ORTHO05D004479 6.4e-76 287.7 191 73.3
MBI16_g12461_MAGBIO Magnolia biondii HOM05D003826 ORTHO05D004479 6.4e-76 287.7 174 79.9
Manes.10G098600 Manihot esculenta HOM05D003826 ORTHO05D004479 6.4e-76 287.7 173 78.6
CSS0016886 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 1.1e-75 287.0 173 80.3
CSS0036052 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 1.1e-75 287.0 173 80.3
PGSC0003DMG400031403 Solanum tuberosum HOM05D003826 ORTHO05D004479 1.4e-75 286.6 183 75.4
Cpa.g.sc20.1 Carica papaya HOM05D003826 ORTHO05D004479 2.4e-75 285.8 172 79.7
Haze_10523 Corylus avellana HOM05D003826 ORTHO05D004479 2.4e-75 285.8 189 72.5
Thhalv10022868m.g Eutrema salsugineum HOM05D003826 ORTHO05D004479 2.4e-75 285.8 191 73.8
AL3G45800 Arabidopsis lyrata HOM05D003826 ORTHO05D004479 5.4e-75 284.6 188 73.9
Migut.N01096 Erythranthe guttata HOM05D003826 ORTHO05D004479 7.1e-75 284.3 175 77.1
Peaxi162Scf00003g03230 Petunia axillaris HOM05D003826 ORTHO05D004479 1.2e-74 283.5 188 75.0
RcHm_v2.0_Chr6g0271011 Rosa chinensis HOM05D003826 ORTHO05D004479 1.6e-74 283.1 175 74.9
CARHR104200 Cardamine hirsuta HOM05D003826 ORTHO05D004479 2.1e-74 282.7 191 72.3
BolC9t54449H Brassica oleracea HOM05D003826 ORTHO05D004479 2.7e-74 282.3 191 71.7
Sp3g27460 Schrenkiella parvula HOM05D003826 ORTHO05D004479 4.6e-74 281.6 186 73.7
GSVIVG01015652001 Vitis vinifera HOM05D003826 ORTHO05D004479 4.6e-74 281.6 163 81.0
TAR376G0575 Trochodendron aralioides HOM05D003826 ORTHO05D004479 6.0e-74 281.2 173 78.6
unitig_46.g18833 Utricularia gibba HOM05D003826 ORTHO05D004479 6.0e-74 281.2 184 75.5
A09p13020 Brassica napus HOM05D003826 ORTHO05D004479 1.0e-73 280.4 191 70.7
BcaB02g11486 Brassica carinata HOM05D003826 ORTHO05D004479 1.3e-73 280.0 191 71.7
arahy.Tifrunner.gnm1.ann1.AL483W Arachis hypogaea HOM05D003826 ORTHO05D004479 1.7e-73 279.6 186 73.1
BcaC04g22775 Brassica carinata HOM05D003826 ORTHO05D004479 1.7e-73 279.6 191 70.7
C09p15420 Brassica napus HOM05D003826 ORTHO05D004479 3.0e-73 278.9 191 70.7
BraA09t36947Z Brassica rapa HOM05D003826 ORTHO05D004479 3.9e-73 278.5 191 70.2
arahy.Tifrunner.gnm1.ann1.8F9AHD Arachis hypogaea HOM05D003826 ORTHO05D004479 6.6e-73 277.7 186 72.0
Aa31LG8G12520 Aethionema arabicum HOM05D003826 ORTHO05D004479 1.5e-72 276.6 191 70.2
EL10Ac9g22073 Beta vulgaris HOM05D003826 ORTHO05D004479 3.3e-72 275.4 176 73.9
Sed0018824 Sechium edule HOM05D003826 ORTHO05D004479 7.3e-72 274.2 186 69.9
CANSAT54G1150 Cannabis sativa HOM05D003826 ORTHO05D004479 9.5e-72 273.9 184 73.4
Glyma.13G256700 Glycine max HOM05D003826 ORTHO05D004479 3.6e-71 271.9 182 70.3
CSS0050337 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 8.1e-71 270.8 162 80.2
TPR.G9500 Trifolium pratense HOM05D003826 ORTHO05D004479 1.8e-70 269.6 188 70.7
Psat1g214120 Pisum sativum HOM05D003826 ORTHO05D004479 2.3e-70 269.2 182 71.4
Lj5A230G39 Lonicera japonica HOM05D003826 ORTHO05D004479 5.2e-70 268.1 158 82.3
Os03g0737400 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 6.8e-70 267.7 171 73.1
VMungo0540G1729 Vigna mungo HOM05D003826 ORTHO05D004479 2.6e-69 265.8 182 69.2
Aqoxy6G00874 Aquilegia oxysepala HOM05D003826 ORTHO05D004479 5.8e-69 264.6 170 75.3
PSO541G0595 Papaver somniferum HOM05D003826 ORTHO05D004479 1.7e-68 263.1 174 72.4
Zm00001eb215290 Zea mays HOM05D003826 ORTHO05D004479 1.7e-68 263.1 169 73.4
CDE04G3107 Ceratophyllum demersum HOM05D003826 ORTHO05D004479 1.4e-67 260.0 170 73.5
Lj6g0003535 Lotus japonicus HOM05D003826 ORTHO05D004479 1.4e-67 260.0 182 68.7
Medtr2g009600 Medicago truncatula HOM05D003826 ORTHO05D004479 1.9e-67 259.6 182 67.6
DCAR_003601 Daucus carota HOM05D003826 ORTHO05D004479 2.4e-67 259.2 172 74.4
Duzib147G0892 Durio zibethinus HOM05D003826 ORTHO05D004479 3.2e-67 258.8 165 75.2
Gorai.008G017400 Gossypium raimondii HOM05D003826 ORTHO05D004479 7.1e-67 257.7 173 72.3
COL.COLO4_32389 Corchorus olitorius HOM05D003826 ORTHO05D004479 2.1e-66 256.1 187 69.0
Dinv13602 Davidia involucrata HOM05D003826 ORTHO05D004479 4.6e-66 255.0 167 73.1
Phvul.002G212900 Phaseolus vulgaris HOM05D003826 ORTHO05D004479 1.3e-65 253.4 170 68.8
SGA_v2.0_scaffold83G26375 Striga asiatica HOM05D003826 ORTHO05D004479 1.7e-65 253.1 134 88.1
Cpa.g.sc55.25 Carica papaya HOM05D003826 ORTHO05D004479 2.3e-65 252.7 170 71.8
Ca_00163_v3 Cicer arietinum L. HOM05D003826 ORTHO05D004479 2.3e-65 252.7 186 67.7
Lalb_Chr05g0216361 Lupinus albus HOM05D003826 ORTHO05D004479 2.3e-65 252.7 165 73.9
Gohir.D12G017100 Gossypium hirsutum HOM05D003826 ORTHO05D004479 3.0e-65 252.3 176 70.5
Lalb_Chr16g0382941 Lupinus albus HOM05D003826 ORTHO05D004479 8.6e-65 250.8 168 70.2
Thecc.01G090400 Theobroma cacao HOM05D003826 ORTHO05D004479 1.9e-64 249.6 183 67.8
Lj4g0024713 Lotus japonicus HOM05D003826 ORTHO05D004479 4.3e-64 248.4 170 67.6
Cfa006882 Carpinus fangiana HOM05D003826 ORTHO05D004479 5.6e-64 248.1 165 72.1
Haze_03870 Corylus avellana HOM05D003826 ORTHO05D004479 5.6e-64 248.1 165 71.5
HPP92_016899 Vanilla planifolia HOM05D003826 ORTHO05D004479 5.6e-64 248.1 168 69.0
Prupe.6G201600 Prunus persica HOM05D003826 ORTHO05D004479 7.3e-64 247.7 167 71.3
Lsat_1_v5_gn_7_82781 Lactuca sativa HOM05D003826 ORTHO05D004479 1.2e-63 246.9 175 72.6
PGR102G1409 Punica granatum HOM05D003826 ORTHO05D004479 1.6e-63 246.5 164 72.6
Medtr4g093560 Medicago truncatula HOM05D003826 ORTHO05D004479 2.1e-63 246.1 170 68.2
arahy.Tifrunner.gnm1.ann1.JLXM4S Arachis hypogaea HOM05D003826 ORTHO05D004479 2.8e-63 245.7 162 72.8
arahy.Tifrunner.gnm1.ann1.QQ8XF2 Arachis hypogaea HOM05D003826 ORTHO05D004479 2.8e-63 245.7 162 72.8
Glyma.07G181900 Glycine max HOM05D003826 ORTHO05D004479 3.6e-63 245.4 170 65.9
Phvul.006G202000 Phaseolus vulgaris HOM05D003826 ORTHO05D004479 3.6e-63 245.4 173 67.6
Atru.chr3.1247 Acer truncatum HOM05D003826 ORTHO05D004479 1.4e-62 243.4 168 69.0
Peaxi162Scf00299g00634 Petunia axillaris HOM05D003826 ORTHO05D004479 1.4e-62 243.4 187 66.3
Psat7g101120 Pisum sativum HOM05D003826 ORTHO05D004479 2.4e-62 242.7 170 66.5
CiPaw.07G047500 Carya illinoinensis HOM05D003826 ORTHO05D004479 3.1e-62 242.3 160 71.2
Manes.12G126200 Manihot esculenta HOM05D003826 ORTHO05D004479 2.6e-61 239.2 170 70.6
MD01G1039300 Malus domestica HOM05D003826 ORTHO05D004479 3.4e-61 238.8 168 67.3
Cc07_g14100 Coffea canephora HOM05D003826 ORTHO05D004479 4.4e-61 238.4 171 66.7
Hma1.2p1_1058F.1_g252870 Hydrangea macrophylla HOM05D003826 ORTHO05D004479 5.8e-61 238.0 159 70.4
Ah.03g139970 Amaranthus hybridus HOM05D003826 ORTHO05D004479 2.9e-60 235.7 161 70.8
TPR.G2887 Trifolium pratense HOM05D003826 ORTHO05D004479 3.8e-60 235.3 170 64.7
SEGI_37389 Sequoiadendron giganteum HOM05D003826 ORTHO05D004479 1.9e-59 233.0 165 66.1
arahy.Tifrunner.gnm1.ann1.8NDV1J Arachis hypogaea HOM05D003826 ORTHO05D004479 2.4e-59 232.6 170 64.1
Nitab4.5_0002095g0060 Nicotiana tabacum HOM05D003826 ORTHO05D004479 2.4e-59 232.6 150 74.0
AT2G14110 Arabidopsis thaliana HOM05D003826 ORTHO05D004479 2.7e-58 229.2 134 77.6
SalBow8G4107 Salvia bowleyana HOM05D003826 ORTHO05D004479 7.8e-58 227.6 190 65.3
arahy.Tifrunner.gnm1.ann1.MWC9N2 Arachis hypogaea HOM05D001561 ORTHO05D001715 1.0e-57 227.3 170 63.5
Os03g0737300 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 5.1e-57 224.9 180 61.1
FAN23G0964 Fragaria x ananassa HOM05D003826 ORTHO05D004479 2.5e-56 222.6 168 66.1
FvH4_1g19640 Fragaria vesca HOM05D003826 ORTHO05D004479 9.6e-56 220.7 168 66.1
FAN19G1458 Fragaria x ananassa HOM05D003826 ORTHO05D004479 9.6e-56 220.7 168 66.1
SalBow6G1284 Salvia bowleyana HOM05D003826 ORTHO05D004479 6.2e-55 218.0 155 69.7
FAN26G3235 Fragaria x ananassa HOM05D003826 ORTHO05D004479 8.1e-55 217.6 168 64.9
Pp3c1_28610 Physcomitrium patens HOM05D003826 ORTHO05D004479 8.1e-55 217.6 165 62.4
AagrBONN_evm.TU.Sc2ySwM_362.1195 Anthoceros agrestis HOM05D003826 ORTHO05D004479 2.4e-54 216.1 160 62.5
SMO271G0099 Selaginella moellendorffii HOM05D003826 ORTHO05D004479 1.2e-53 213.8 159 62.3
FAN28G0881 Fragaria x ananassa HOM05D003826 ORTHO05D004479 3.8e-52 208.8 182 59.9
RcHm_v2.0_Chr2g0111211 Rosa chinensis HOM05D003826 ORTHO05D004479 8.4e-52 207.6 166 65.1
GSVIVG01015647001 Vitis vinifera HOM05D003826 ORTHO05D004479 8.4e-52 207.6 138 75.4
AUR62003663 Chenopodium quinoa HOM05D003826 ORTHO05D004479 1.4e-51 206.8 157 63.7
CANSAT01G0714 Cannabis sativa HOM05D003826 ORTHO05D004479 1.9e-51 206.5 163 61.3
Lj5A230G40 Lonicera japonica HOM05D003826 ORTHO05D004479 7.1e-51 204.5 160 63.8
Hund00378 Selenicereus undatus HOM05D003826 ORTHO05D004479 2.7e-50 202.6 132 75.0
Mapoly0032s0046 Marchantia polymorpha HOM05D003826 ORTHO05D004479 4.6e-50 201.8 169 58.6
RhsimUnG0154900 Rhododendron simsii HOM05D003826 ORTHO05D004479 8.7e-49 197.6 164 64.6
ATR0767G074 Amborella trichopoda HOM05D003826 ORTHO05D004479 1.9e-48 196.4 129 76.0
Ah.01g023970 Amaranthus hybridus HOM05D003826 ORTHO05D004479 3.3e-48 195.7 169 58.6
Mapoly0042s0019 Marchantia polymorpha HOM05D003826 ORTHO05D004479 3.3e-48 195.7 188 53.2
Glyma.15G058200 Glycine max HOM05D003826 ORTHO05D004479 2.8e-47 192.6 176 56.2
AUR62012887 Chenopodium quinoa HOM05D003826 ORTHO05D004479 9.0e-46 187.6 169 56.8
CBR_g26273 Chara braunii HOM05D003826 ORTHO05D004479 1.2e-45 187.2 141 61.0
AUR62027111 Chenopodium quinoa HOM05D003826 ORTHO05D004479 1.2e-45 187.2 169 56.8
ATR0767G082 Amborella trichopoda HOM05D003826 ORTHO05D004479 1.5e-45 186.8 129 71.3
Os11g0434000 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 4.6e-42 175.3 164 54.9
Hund16529 Selenicereus undatus HOM05D003826 ORTHO05D004479 5.1e-41 171.8 129 65.1
GSVIVG01015646001 Vitis vinifera HOM05D003826 ORTHO05D004479 3.1e-38 162.5 116 69.8
Solyc10g047310.1 Solanum lycopersicum HOM05D003826 ORTHO05D004479 8.4e-36 154.5 94 74.5
Nn5g29884 Nelumbo nucifera HOM05D003826 ORTHO05D004479 9.3e-35 151.0 90 76.7
VMungo0251G2759 Vigna mungo HOM05D003826 ORTHO05D004479 2.3e-33 146.4 91 71.4
AUR62017972 Chenopodium quinoa HOM05D003826 ORTHO05D004479 5.1e-33 145.2 97 73.2
Ciclev10026755m.g Citrus clementina HOM05D003826 ORTHO05D004479 4.3e-32 142.1 93 73.1
Mapoly0010s0051 Marchantia polymorpha HOM05D003826 ORTHO05D004479 1.4e-30 137.1 155 43.2
Lalb_Chr18g0060401 Lupinus albus HOM05D003826 ORTHO05D004479 3.5e-26 122.5 175 42.3
MD10G1054300 Malus domestica HOM05D003826 ORTHO05D004479 2.2e-23 113.2 73 69.9
Gohir.D13G049650 Gossypium hirsutum HOM05D003826 ORTHO05D004479 7.9e-18 94.7 67 74.6
Mapoly0042s0017 Marchantia polymorpha HOM05D003826 ORTHO05D004479 5.1e-17 92.0 79 57.0
Sopen10g017590 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-16 88.6 52 76.9
THA.LOC104824951 Tarenaya hassleriana HOM05D003826 ORTHO05D004479 3.8e-12 75.9 106 42.5
Dinv36604 Davidia involucrata HOM05D003826 ORTHO05D004479 4.2e-11 72.4 36 88.9
MCO11G520 Micromonas commoda HOM05D003826 ORTHO05D004479 4.2e-11 72.4 173 31.2
FAN15G0689 Fragaria x ananassa HOM05D003826 ORTHO05D004479 1.0e-09 67.8 36 80.6
Glyma.08G067900 Glycine max HOM05D003826 ORTHO05D004479 1.0e-09 67.8 83 45.8
Cre09.g401738 Chlamydomonas reinhardtii HOM05D003826 ORTHO05D004479 3.7e-07 59.3 171 27.5
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.8 39 66.7
MCO09G863 Micromonas commoda HOM05D003826 ORTHO05D004479 2.4e-06 56.6 61 39.3


User provided reference genes

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