Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042369.1 Olea europaea HOM05D003548 ORTHO05D004066 2.0e-161 572.4 300 100.0
Oeu042375.2 Olea europaea HOM05D003548 ORTHO05D004066 3.8e-139 498.4 268 98.1
Oeu059583.1 Olea europaea HOM05D003548 ORTHO05D004066 1.0e-96 357.5 270 74.4
Migut.A00697 Erythranthe guttata HOM05D003548 ORTHO05D004066 2.6e-63 246.5 276 54.0
CSS0019271 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 2.8e-62 243.0 270 55.6
Cc08_g15520 Coffea canephora HOM05D003548 ORTHO05D004066 2.8e-62 243.0 274 55.8
CSS0042414 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 6.3e-62 241.9 270 55.2
Dinv37570 Davidia involucrata HOM05D003548 ORTHO05D004066 7.7e-60 235.0 277 51.3
Dinv38885 Davidia involucrata HOM05D003548 ORTHO05D004066 1.3e-59 234.2 243 56.0
Hma1.2p1_0216F.1_g091270 Hydrangea macrophylla HOM05D003548 ORTHO05D004066 2.1e-57 226.9 289 49.5
Peaxi162Scf00074g00156 Petunia axillaris HOM05D003548 ORTHO05D004066 1.5e-55 220.7 273 52.4
SalBow1G6595 Salvia bowleyana HOM05D003548 ORTHO05D004066 1.1e-53 214.5 270 53.3
SalBow1G7748 Salvia bowleyana HOM05D003548 ORTHO05D004066 4.1e-53 212.6 270 53.3
Sopen08g030060 Solanum pennellii HOM05D003548 ORTHO05D004066 3.0e-51 206.5 259 50.2
CAN.G532.68 Capsicum annuum HOM05D003548 ORTHO05D004066 1.5e-50 204.1 277 48.4
TWI81G0889 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 2.6e-47 193.4 270 50.0
Nn1g01756 Nelumbo nucifera HOM05D003548 ORTHO05D004066 1.3e-46 191.0 276 48.2
MD06G1096100 Malus domestica HOM05D003548 ORTHO05D004066 1.7e-46 190.7 273 46.9
Prupe.5G110700 Prunus persica HOM05D003548 ORTHO05D004066 1.7e-46 190.7 273 47.3
PGSC0003DMG400005830 Solanum tuberosum HOM05D003548 ORTHO05D004066 8.3e-46 188.3 260 46.5
Oeu063042.1 Olea europaea HOM05D003548 ORTHO05D004066 1.1e-45 188.0 277 47.7
Solyc08g081760.3 Solanum lycopersicum HOM05D003548 ORTHO05D004066 1.1e-45 188.0 259 48.3
Sopen08g004030 Solanum pennellii HOM05D003548 ORTHO05D004066 2.4e-45 186.8 260 45.4
Potri.001G097200 Populus trichocarpa HOM05D003548 ORTHO05D004066 3.2e-45 186.4 274 47.4
DCAR_008526 Daucus carota HOM05D003548 ORTHO05D004066 4.1e-45 186.0 279 45.5
Peaxi162Scf00102g01614 Petunia axillaris HOM05D003548 ORTHO05D004066 5.4e-45 185.7 297 43.8
Solyc08g008180.3 Solanum lycopersicum HOM05D003548 ORTHO05D004066 5.4e-45 185.7 260 45.4
Thecc.03G289200 Theobroma cacao HOM05D003548 ORTHO05D004066 7.0e-45 185.3 274 46.7
QL02p032544 Quercus lobata HOM05D003548 ORTHO05D004066 9.2e-45 184.9 271 48.0
TWI15G1126 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 1.6e-44 184.1 269 46.8
CANSAT21G0595 Cannabis sativa HOM05D003548 ORTHO05D004066 2.0e-44 183.7 274 49.3
Haze_08718 Corylus avellana HOM05D003548 ORTHO05D004066 6.0e-44 182.2 271 46.1
MD14G1116300 Malus domestica HOM05D003548 ORTHO05D004066 1.7e-43 180.6 271 45.8
Sabra01G0072500 Salix brachista HOM05D003548 ORTHO05D004066 1.7e-43 180.6 273 47.6
Phvul.002G294600 Phaseolus vulgaris HOM05D003548 ORTHO05D004066 2.3e-43 180.3 273 47.3
Nitab4.5_0002944g0150 Nicotiana tabacum HOM05D003548 ORTHO05D004066 8.6e-43 178.3 253 47.8
MSTRG.25643 Avicennia marina HOM05D003548 ORTHO05D004066 1.9e-42 177.2 270 44.8
COL.COLO4_08334 Corchorus olitorius HOM05D003548 ORTHO05D004066 2.5e-42 176.8 274 45.3
TWI60G0243 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 1.4e-40 171.0 270 46.7
Cfa012267 Carpinus fangiana HOM05D003548 ORTHO05D004066 1.8e-40 170.6 271 44.6
ClCG01G002150 Citrullus lanatus HOM05D003548 ORTHO05D004066 3.1e-40 169.9 273 45.4
MBI06_g29318_MAGBIO Magnolia biondii HOM05D003548 ORTHO05D004066 6.8e-40 168.7 265 45.7
Eucgr.E00807 Eucalyptus grandis HOM05D003548 ORTHO05D004066 8.9e-40 168.3 270 44.8
MELO3C005727.2 Cucumis melo HOM05D003548 ORTHO05D004066 1.5e-39 167.5 271 44.6
Duzib205G0585 Durio zibethinus HOM05D003548 ORTHO05D004066 2.0e-39 167.2 254 44.5
CsaV3_5G002270 Cucumis sativus L. HOM05D003548 ORTHO05D004066 2.6e-39 166.8 271 44.6
PGSC0003DMG400012172 Solanum tuberosum HOM05D003548 ORTHO05D004066 2.6e-39 166.8 259 44.8
Nitab4.5_0005339g0010 Nicotiana tabacum HOM05D003548 ORTHO05D004066 1.7e-38 164.1 268 44.4
Sed0010954 Sechium edule HOM05D003548 ORTHO05D004066 8.3e-38 161.8 274 42.3
GSVIVG01019448001 Vitis vinifera HOM05D003548 ORTHO05D004066 8.3e-38 161.8 269 45.0
Gohir.D09G185600 Gossypium hirsutum HOM05D003548 ORTHO05D004066 1.9e-37 160.6 271 43.9
Potri.003G134200 Populus trichocarpa HOM05D003548 ORTHO05D004066 1.9e-37 160.6 260 44.6
Duzib084G0464 Durio zibethinus HOM05D003548 ORTHO05D004066 2.4e-37 160.2 271 43.5
Gorai.006G208300 Gossypium raimondii HOM05D003548 ORTHO05D004066 2.4e-37 160.2 271 43.9
Gohir.A09G191100 Gossypium hirsutum HOM05D003548 ORTHO05D004066 3.2e-37 159.8 271 43.9
TPR.G3387 Trifolium pratense HOM05D000059 ORTHO05D004066 3.2e-37 159.8 266 44.0
Medtr8g099105 Medicago truncatula HOM05D003548 ORTHO05D004066 9.2e-37 158.3 270 44.1
Sp2g00590 Schrenkiella parvula HOM05D003548 ORTHO05D004066 4.6e-36 156.0 279 47.3
MSTRG.11944 Avicennia marina HOM05D003548 ORTHO05D004066 6.0e-36 155.6 270 43.3
Atru.chr9.2080 Acer truncatum HOM05D003548 ORTHO05D004066 1.3e-35 154.5 272 42.3
CiPaw.12G087100 Carya illinoinensis HOM05D003548 ORTHO05D004066 2.3e-35 153.7 273 42.5
CiPaw.11G126900 Carya illinoinensis HOM05D003548 ORTHO05D004066 1.5e-34 151.0 271 42.1
SGA_v2.0_scaffold96G28999 Striga asiatica HOM05D003548 ORTHO05D004066 1.5e-34 151.0 263 45.6
Sed0003878 Sechium edule HOM05D003548 ORTHO05D004066 1.9e-34 150.6 275 42.2
DCAR_006852 Daucus carota HOM05D003548 ORTHO05D004066 3.3e-34 149.8 277 39.4
Glyma.05G213300 Glycine max HOM05D003548 ORTHO05D004066 7.3e-34 148.7 276 42.8
Thhalv10023333m.g Eutrema salsugineum HOM05D003548 ORTHO05D004066 9.5e-34 148.3 277 45.8
THA.LOC104809354 Tarenaya hassleriana HOM05D003548 ORTHO05D004066 2.1e-33 147.1 265 44.9
FvH4_5g03650 Fragaria vesca HOM05D003548 ORTHO05D004066 2.8e-33 146.7 289 41.2
Gohir.D03G080300 Gossypium hirsutum HOM05D003548 ORTHO05D004066 6.2e-33 145.6 273 40.7
TAR636G0920 Trochodendron aralioides HOM05D003548 ORTHO05D004066 8.1e-33 145.2 262 42.0
FAN13G0102 Fragaria x ananassa HOM05D003548 ORTHO05D004066 1.4e-32 144.4 285 39.6
Gorai.003G083700 Gossypium raimondii HOM05D003548 ORTHO05D004066 1.4e-32 144.4 273 39.9
VMungo0251G1700 Vigna mungo HOM05D003548 ORTHO05D004066 1.4e-32 144.4 272 41.5
Aqoxy5G04044 Aquilegia oxysepala HOM05D003548 ORTHO05D004066 1.8e-32 144.1 266 43.2
unitig_32.g11608 Utricularia gibba HOM05D003548 ORTHO05D004066 1.8e-32 144.1 257 42.0
Glyma.01G223400 Glycine max HOM05D003548 ORTHO05D004066 3.1e-32 143.3 272 44.1
Glyma.08G019800 Glycine max HOM05D003548 ORTHO05D004066 3.1e-32 143.3 276 41.7
Gohir.A02G103700 Gossypium hirsutum HOM05D003548 ORTHO05D004066 3.1e-32 143.3 273 39.6
arahy.Tifrunner.gnm1.ann1.59PT6M Arachis hypogaea HOM05D003548 ORTHO05D004066 4.0e-32 142.9 274 41.6
Duzib068G0600 Durio zibethinus HOM05D003548 ORTHO05D004066 6.8e-32 142.1 246 44.7
FAN04G1462 Fragaria x ananassa HOM05D003548 ORTHO05D004066 3.4e-31 139.8 291 38.5
FAN13G1218 Fragaria x ananassa HOM05D003548 ORTHO05D004066 5.8e-31 139.0 291 38.5
Ciclev10019140m.g Citrus clementina HOM05D003548 ORTHO05D004066 1.3e-30 137.9 273 40.3
arahy.Tifrunner.gnm1.ann1.36D870 Arachis hypogaea HOM05D003548 ORTHO05D004066 2.9e-30 136.7 273 41.0
Ca_10964_v3 Cicer arietinum L. HOM05D003548 ORTHO05D004066 2.9e-30 136.7 262 40.1
FAN04G2241 Fragaria x ananassa HOM05D003548 ORTHO05D004066 2.9e-30 136.7 291 38.1
Manes.02G014900 Manihot esculenta HOM05D003548 ORTHO05D004066 2.9e-30 136.7 272 40.1
Psat7g029120 Pisum sativum HOM05D003548 ORTHO05D004066 3.8e-30 136.3 266 40.2
AL2G10890 Arabidopsis lyrata HOM05D003548 ORTHO05D004066 1.1e-29 134.8 276 44.6
RcHm_v2.0_Chr7g0196081 Rosa chinensis HOM05D003548 ORTHO05D004066 1.9e-29 134.0 273 39.9
FAN18G1037 Fragaria x ananassa HOM05D003548 ORTHO05D004066 2.4e-29 133.7 150 54.7
ECA246G0635 Erigeron canadensis HOM05D003548 ORTHO05D004066 3.2e-29 133.3 266 42.9
GSVIVG01003094001 Vitis vinifera HOM05D003548 ORTHO05D004066 5.4e-29 132.5 156 50.6
GSVIVG01028755001 Vitis vinifera HOM05D003548 ORTHO05D004066 7.1e-29 132.1 233 41.6
TAR629G2865 Trochodendron aralioides HOM05D003548 ORTHO05D004066 1.6e-28 131.0 266 40.2
AT1G64140 Arabidopsis thaliana HOM05D003548 ORTHO05D004066 6.0e-28 129.0 271 42.8
Cpa.g.sc321.2 Carica papaya HOM05D003548 ORTHO05D004066 6.0e-28 129.0 143 55.9
HanXRQChr17g0533931 Helianthus annuus HOM05D003548 ORTHO05D004066 6.0e-28 129.0 251 41.0
Carub.0002s0067 Capsella rubella HOM05D003548 ORTHO05D004066 3.9e-27 126.3 261 44.4
Lj4g0009292 Lotus japonicus HOM05D003548 ORTHO05D004066 3.3e-26 123.2 272 38.6
BcaB07g31439 Brassica carinata HOM05D003548 ORTHO05D008486 9.6e-26 121.7 276 42.8
BcaC04g22534 Brassica carinata HOM05D003548 ORTHO05D004066 9.6e-26 121.7 280 42.1
C09p18070 Brassica napus HOM05D003548 ORTHO05D004066 9.6e-26 121.7 280 42.1
BolC9t54704H Brassica oleracea HOM05D003548 ORTHO05D004066 1.2e-25 121.3 281 42.0
Dinv28355 Davidia involucrata HOM05D003548 ORTHO05D004066 2.8e-25 120.2 259 38.2
Lalb_Chr16g0390341 Lupinus albus HOM05D003548 ORTHO05D004066 2.8e-25 120.2 275 38.9
MBI07_g38645_MAGBIO Magnolia biondii HOM05D003548 ORTHO05D004066 2.4e-24 117.1 264 39.8
Sabra03G0096600 Salix brachista HOM05D003548 ORTHO05D004066 3.1e-24 116.7 268 36.2
PGR031G0552 Punica granatum HOM05D003548 ORTHO05D004066 3.4e-23 113.2 271 38.0
AUR62019776 Chenopodium quinoa HOM05D003548 ORTHO05D004066 3.2e-21 106.7 273 35.2
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 5.4e-21 105.9 271 36.9
ECA233G1322 Erigeron canadensis HOM05D003548 ORTHO05D004066 3.5e-20 103.2 227 39.6
Hund11425 Selenicereus undatus HOM05D000154 ORTHO05D004066 1.0e-19 101.7 173 39.9
BcaC04g22535 Brassica carinata HOM05D003548 ORTHO05D004066 2.3e-19 100.5 143 51.7
PSO063G3847 Papaver somniferum HOM05D003548 ORTHO05D004066 3.0e-19 100.1 254 34.3
PGSC0003DMG400028194 Solanum tuberosum HOM05D003548 ORTHO05D004066 5.1e-19 99.4 144 44.4
Sc01g0009980 Simmondsia chinensis HOM05D003548 ORTHO05D004066 6.6e-19 99.0 271 33.6
HanXRQChr06g0166281 Helianthus annuus HOM05D003548 ORTHO05D004066 1.9e-18 97.4 229 37.1
PGR042G3215 Punica granatum HOM05D003548 ORTHO05D004066 4.3e-18 96.3 253 36.4
PSO135G0411 Papaver somniferum HOM05D003548 ORTHO05D004066 9.6e-18 95.1 270 34.4
Phvul.002G161400 Phaseolus vulgaris HOM05D003548 ORTHO05D004066 1.6e-17 94.4 236 35.2
Aa31LG2G1190 Aethionema arabicum HOM05D003548 ORTHO05D004066 2.1e-17 94.0 269 35.3
PSO170G6721 Papaver somniferum HOM05D003548 ORTHO05D004066 3.6e-17 93.2 256 32.8
PSO384G2366 Papaver somniferum HOM05D003548 ORTHO05D004066 4.8e-17 92.8 270 34.8
BraA09t37059Z Brassica rapa HOM05D003548 ORTHO05D004066 1.1e-16 91.7 279 39.1
Rhsim02G0237200 Rhododendron simsii HOM05D003548 ORTHO05D004066 1.4e-16 91.3 275 35.6
VMungo1215G2254 Vigna mungo HOM05D003548 ORTHO05D004066 3.1e-16 90.1 132 48.5
HPP92_006483 Vanilla planifolia HOM05D003548 ORTHO05D004066 1.5e-15 87.8 264 32.2
A09p14120 Brassica napus HOM05D003548 ORTHO05D004066 3.8e-14 83.2 276 37.7
CSS0041240 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 3.8e-14 83.2 259 33.2
CSS0049608 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 3.8e-14 83.2 259 33.2
Actinidia08610 Actinidia chinensis HOM05D003548 ORTHO05D004066 8.4e-14 82.0 251 34.7
Dinv35294 Davidia involucrata HOM05D003548 ORTHO05D004066 2.4e-13 80.5 261 32.6
Aqoxy7G00221 Aquilegia oxysepala HOM05D003548 ORTHO05D004066 3.2e-13 80.1 169 38.5
Cc02_g02080 Coffea canephora HOM05D003548 ORTHO05D004066 3.2e-13 80.1 206 37.9
unitig_748.g7420 Utricularia gibba HOM05D003548 ORTHO05D004066 9.3e-13 78.6 268 31.3
AUR62010777 Chenopodium quinoa HOM05D003548 ORTHO05D004066 1.6e-12 77.8 273 30.4
BcaB07g31525 Brassica carinata HOM05D003548 ORTHO05D004066 3.5e-12 76.6 275 34.9
CARHR046800 Cardamine hirsuta HOM05D003548 ORTHO05D004066 1.8e-11 74.3 233 36.5
Ah.12g052120 Amaranthus hybridus HOM05D000265 ORTHO05D000161 8.7e-11 72.0 268 31.0
CDE02G2034 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 2.5e-10 70.5 169 39.6
Oeu003337.1 Olea europaea HOM05D003548 ORTHO05D004066 1.6e-09 67.8 201 29.9
Os01g0621900 Oryza sativa ssp. japonica HOM05D003548 ORTHO05D004066 3.6e-09 66.6 270 31.9
EL10Ac5g12854 Beta vulgaris HOM05D003548 ORTHO05D004066 1.4e-08 64.7 282 28.0
Oeu050927.1 Olea europaea HOM05D003548 ORTHO05D004066 1.4e-08 64.7 231 29.9
Actinidia34177 Actinidia chinensis HOM05D003548 ORTHO05D004066 1.8e-08 64.3 260 31.5
Lj2P175T19 Lonicera japonica HOM05D003548 ORTHO05D004066 3.1e-08 63.5 102 42.2
Oeu050928.1 Olea europaea HOM05D003548 ORTHO05D004066 6.9e-08 62.4 229 29.3
C09p17010 Brassica napus HOM05D003548 ORTHO05D004066 4.5e-07 59.7 273 34.1
Eucgr.D01792 Eucalyptus grandis HOM05D003548 ORTHO05D004066 3.8e-06 56.6 266 28.6


User provided reference genes

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