Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042288.1 Olea europaea HOM05D008093 ORTHO05D009840 1.6e-43 179.1 95 100.0
Oeu033661.1 Olea europaea HOM05D008093 ORTHO05D009840 2.4e-31 138.7 95 80.0
Hma1.2p1_0476F.1_g160900 Hydrangea macrophylla HOM05D008093 ORTHO05D009840 3.2e-20 101.7 88 61.4
Nn5g28574 Nelumbo nucifera HOM05D008093 ORTHO05D009840 1.2e-19 99.8 95 55.8
Peaxi162Scf00589g00323 Petunia axillaris HOM05D008093 ORTHO05D009840 1.0e-18 96.7 92 59.8
Nitab4.5_0002667g0080 Nicotiana tabacum HOM05D008093 ORTHO05D009840 3.0e-18 95.1 90 57.8
Solyc11g005930.2 Solanum lycopersicum HOM05D008093 ORTHO05D009840 3.0e-18 95.1 91 56.0
Dinv24346 Davidia involucrata HOM05D008093 ORTHO05D009840 8.8e-18 93.6 89 57.3
PGSC0003DMG400028663 Solanum tuberosum HOM05D008093 ORTHO05D009840 1.2e-17 93.2 92 56.5
Ca_17640_v3 Cicer arietinum L. HOM05D008093 ORTHO05D009840 1.5e-17 92.8 95 53.7
Nitab4.5_0000856g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 2.0e-17 92.4 90 56.7
Nitab4.5_0013695g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 2.6e-17 92.0 90 55.6
Potri.005G058800 Populus trichocarpa HOM05D008093 ORTHO05D009840 2.6e-17 92.0 96 56.2
QL06p028766 Quercus lobata HOM05D008093 ORTHO05D009840 3.4e-17 91.7 91 53.8
Manes.12G154600 Manihot esculenta HOM05D008093 ORTHO05D009840 4.4e-17 91.3 91 58.2
RcHm_v2.0_Chr2g0101941 Rosa chinensis HOM05D008093 ORTHO05D009840 5.7e-17 90.9 86 54.7
MD02G1150700 Malus domestica HOM05D008093 ORTHO05D009840 1.3e-16 89.7 97 54.6
Cc07_g18370 Coffea canephora HOM05D008093 ORTHO05D009840 1.7e-16 89.4 91 59.3
FAN28G2095 Fragaria x ananassa HOM05D008093 ORTHO05D009840 2.8e-16 88.6 91 53.8
Duzib264G0739 Durio zibethinus HOM05D008093 ORTHO05D009840 3.7e-16 88.2 90 55.6
FvH4_1g13550 Fragaria vesca HOM05D008093 ORTHO05D009840 6.3e-16 87.4 91 52.7
FAN26G1298 Fragaria x ananassa HOM05D008093 ORTHO05D009840 6.3e-16 87.4 91 52.7
Sopen11g001870 Solanum pennellii HOM05D008093 ORTHO05D009840 6.3e-16 87.4 92 52.2
Thecc.01G130900 Theobroma cacao HOM05D008093 ORTHO05D009840 6.3e-16 87.4 88 54.5
CiPaw.04G083000 Carya illinoinensis HOM05D008093 ORTHO05D009840 1.4e-15 86.3 96 53.1
MBI03_g00424_MAGBIO Magnolia biondii HOM05D008093 ORTHO05D009840 1.4e-15 86.3 93 53.8
Psat7g045640 Pisum sativum HOM05D008093 ORTHO05D009840 2.4e-15 85.5 88 52.3
Glyma.08G156600 Glycine max HOM05D008093 ORTHO05D009840 4.1e-15 84.7 95 49.5
MD15G1265300 Malus domestica HOM05D008093 ORTHO05D009840 5.4e-15 84.3 97 53.6
Cfa002886 Carpinus fangiana HOM05D008093 ORTHO05D009840 7.0e-15 84.0 90 54.4
Gohir.A05G385600 Gossypium hirsutum HOM05D008093 ORTHO05D009840 7.0e-15 84.0 88 53.4
Actinidia06628 Actinidia chinensis HOM05D008093 ORTHO05D009840 9.1e-15 83.6 90 50.0
Prupe.7G152300 Prunus persica HOM05D008093 ORTHO05D009840 9.1e-15 83.6 82 56.1
GSVIVG01026494001 Vitis vinifera HOM05D008093 ORTHO05D009840 9.1e-15 83.6 77 57.1
Lj4g0016515 Lotus japonicus HOM05D008093 ORTHO05D009840 1.2e-14 83.2 117 49.6
MELO3C023245.2 Cucumis melo HOM05D008093 ORTHO05D009840 1.6e-14 82.8 90 52.2
ClCG02G000540 Citrullus lanatus HOM05D008093 ORTHO05D009840 2.0e-14 82.4 88 51.1
Medtr8g093620 Medicago truncatula HOM05D008093 ORTHO05D009840 2.0e-14 82.4 88 52.3
COL.COLO4_35729 Corchorus olitorius HOM05D008093 ORTHO05D009840 2.7e-14 82.0 92 53.3
CiPaw.04G083200 Carya illinoinensis HOM05D008093 ORTHO05D009840 3.5e-14 81.6 96 52.1
Glyma.05G191500 Glycine max HOM05D008093 ORTHO05D009840 3.5e-14 81.6 97 50.5
Lalb_Chr07g0184461 Lupinus albus HOM05D008093 ORTHO05D009840 4.5e-14 81.3 92 51.1
Sc09g0002370 Simmondsia chinensis HOM05D008093 ORTHO05D009840 4.5e-14 81.3 104 49.0
CsaV3_2G018270 Cucumis sativus L. HOM05D008093 ORTHO05D009840 5.9e-14 80.9 92 51.1
Sed0027082 Sechium edule HOM05D008093 ORTHO05D009840 7.7e-14 80.5 93 51.6
Lalb_Chr12g0203141 Lupinus albus HOM05D008093 ORTHO05D009840 1.0e-13 80.1 99 51.5
Ciclev10002949m.g Citrus clementina HOM05D008093 ORTHO05D009840 1.7e-13 79.3 89 51.7
Phvul.002G271900 Phaseolus vulgaris HOM05D008093 ORTHO05D009840 2.3e-13 79.0 105 45.7
arahy.Tifrunner.gnm1.ann1.IYM9ZI Arachis hypogaea HOM05D008093 ORTHO05D009840 3.8e-13 78.2 100 45.0
VMungo0251G0054 Vigna mungo HOM05D008093 ORTHO05D009840 6.5e-13 77.4 106 47.2
Nitab4.5_0002667g0090 Nicotiana tabacum HOM05D008093 ORTHO05D009840 1.5e-12 76.3 97 47.4
Potri.007G109200 Populus trichocarpa HOM05D008093 ORTHO05D009840 1.5e-12 76.3 103 46.6
QL06p028768 Quercus lobata HOM05D008093 ORTHO05D009840 1.5e-12 76.3 68 54.4
Eucgr.L03270 Eucalyptus grandis HOM05D008093 ORTHO05D009840 2.5e-12 75.5 90 50.0
Gorai.012G034100 Gossypium raimondii HOM05D008093 ORTHO05D009840 2.5e-12 75.5 73 57.5
Aqoxy5G02237 Aquilegia oxysepala HOM05D008093 ORTHO05D009840 7.2e-12 73.9 102 44.1
Gohir.D04G022800 Gossypium hirsutum HOM05D008093 ORTHO05D009840 7.2e-12 73.9 56 66.1
ATR1136G205 Amborella trichopoda HOM05D008093 ORTHO05D009840 2.1e-11 72.4 86 51.2
MBI06_g29669_MAGBIO Magnolia biondii HOM05D008093 ORTHO05D009840 2.1e-11 72.4 85 49.4
AUR62006838 Chenopodium quinoa HOM05D008093 ORTHO05D009840 8.0e-11 70.5 96 46.9
Haze_25223 Corylus avellana HOM05D008093 ORTHO05D009840 8.8e-10 67.0 67 56.7
Os12g0187800 Oryza sativa ssp. japonica HOM05D008093 ORTHO05D009840 1.2e-09 66.6 52 61.5
THA.LOC104819498 Tarenaya hassleriana HOM05D010996 ORTHO05D009840 1.5e-09 66.2 91 41.8
Zm00001eb138530 Zea mays HOM05D008093 ORTHO05D009840 2.0e-09 65.9 49 65.3
EL10Ac4g09593 Beta vulgaris HOM05D008093 ORTHO05D009840 2.6e-09 65.5 94 39.4
FAN19G1201 Fragaria x ananassa HOM05D008093 ORTHO05D009840 5.7e-09 64.3 53 62.3
Sabra07G0089300 Salix brachista HOM05D008093 ORTHO05D009840 5.7e-09 64.3 50 66.0
FAN23G2512 Fragaria x ananassa HOM05D008093 ORTHO05D009840 9.8e-09 63.5 53 62.3
Zm00001eb409100 Zea mays HOM05D008093 ORTHO05D009840 1.3e-08 63.2 47 66.0
BcaC09g52160 Brassica carinata HOM05D010996 ORTHO05D009840 2.2e-08 62.4 104 44.2
arahy.Tifrunner.gnm1.ann1.Y5JHNR Arachis hypogaea HOM05D008093 ORTHO05D009840 6.3e-08 60.8 51 56.9
AT4G33467 Arabidopsis thaliana HOM05D010996 ORTHO05D009840 1.8e-07 59.3 93 39.8
A01p04810 Brassica napus HOM05D010996 ORTHO05D009840 1.8e-07 59.3 109 39.4
BraA01t00464Z Brassica rapa HOM05D010996 ORTHO05D009840 1.8e-07 59.3 109 39.4
C01p05220 Brassica napus HOM05D010996 ORTHO05D009840 2.4e-07 58.9 101 40.6
BolC1t00501H Brassica oleracea HOM05D010996 ORTHO05D009840 2.4e-07 58.9 101 40.6
AL7G18090 Arabidopsis lyrata HOM05D010996 ORTHO05D009840 3.1e-07 58.5 91 38.5
CARHR241540 Cardamine hirsuta HOM05D010996 ORTHO05D009840 5.4e-07 57.8 100 36.0
A03p62020 Brassica napus HOM05D010996 ORTHO05D009840 1.2e-06 56.6 109 38.5
BraA03t15242Z Brassica rapa HOM05D010996 ORTHO05D009840 1.2e-06 56.6 109 38.5
Thecc.08G142600 Theobroma cacao HOM05D029484 ORTHO05D011239 1.2e-06 56.6 74 43.2
TPR.G6325 Trifolium pratense HOM05D009255 ORTHO05D011239 1.2e-06 56.6 63 46.0
Aa31sc146G10 Aethionema arabicum HOM05D010996 ORTHO05D009840 1.6e-06 56.2 53 54.7
Carub.0007s0701 Capsella rubella HOM05D010996 ORTHO05D009840 1.6e-06 56.2 44 56.8
C07p59670 Brassica napus HOM05D010996 ORTHO05D009840 2.0e-06 55.8 99 40.4
Thhalv10026675m.g Eutrema salsugineum HOM05D010996 ORTHO05D009840 2.0e-06 55.8 92 41.3


User provided reference genes

Program Settings