Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042269.2 Olea europaea HOM05D009163 ORTHO05D010445 3.4e-103 379.4 406 100.0
Oeu033653.1 Olea europaea HOM05D009163 ORTHO05D010445 1.8e-27 127.9 86 73.3
Dinv13520 Davidia involucrata HOM05D009163 ORTHO05D010445 4.0e-19 100.1 116 48.3
Migut.H00982 Erythranthe guttata HOM05D009163 ORTHO05D010445 2.1e-15 87.8 85 54.1
Nitab4.5_0001960g0040 Nicotiana tabacum HOM05D012291 ORTHO05D010445 4.6e-15 86.7 119 37.8
Nitab4.5_0000344g0220 Nicotiana tabacum HOM05D012291 ORTHO05D010445 5.1e-14 83.2 112 40.2
MSTRG.15269 Avicennia marina HOM05D009163 ORTHO05D010445 6.7e-14 82.8 78 48.7
CiPaw.01G040400 Carya illinoinensis HOM05D009163 ORTHO05D010445 1.5e-13 81.6 127 35.4
Solyc02g085150.4 Solanum lycopersicum HOM05D012291 ORTHO05D010445 1.9e-13 81.3 122 37.7
TWI09G1297 Tripterygium wilfordii HOM05D009163 ORTHO05D010445 2.5e-13 80.9 88 50.0
Rhsim08G0118300 Rhododendron simsii HOM05D009163 ORTHO05D010445 7.4e-13 79.3 97 45.4
RhsimUnG0100100 Rhododendron simsii HOM05D009163 ORTHO05D010445 7.4e-13 79.3 97 45.4
GSVIVG01018946001 Vitis vinifera HOM05D009163 ORTHO05D010445 9.6e-13 79.0 95 44.2
CiPaw.11G175700 Carya illinoinensis HOM05D009163 ORTHO05D010445 1.3e-12 78.6 127 33.9
vmacro17825 Vaccinium macrocarpon HOM05D009163 ORTHO05D010445 2.1e-12 77.8 130 38.5
PGSC0003DMG400003600 Solanum tuberosum HOM05D012291 ORTHO05D010445 3.7e-12 77.0 76 46.1
Nitab4.5_0000178g0120 Nicotiana tabacum HOM05D012291 ORTHO05D010445 6.2e-12 76.3 90 44.4
Actinidia19192 Actinidia chinensis HOM05D009163 ORTHO05D010445 1.1e-11 75.5 97 39.2
MSTRG.23518 Avicennia marina HOM05D009163 ORTHO05D010445 1.1e-11 75.5 113 46.0
SalBow1G0010 Salvia bowleyana HOM05D009163 ORTHO05D010445 5.3e-11 73.2 113 43.4
Aqoxy6G01129 Aquilegia oxysepala HOM05D009163 ORTHO05D010445 2.0e-10 71.2 123 37.4
QL06p046412 Quercus lobata HOM05D009163 ORTHO05D010445 3.4e-10 70.5 123 35.0
Sopen02g029850 Solanum pennellii HOM05D012291 ORTHO05D010445 5.8e-10 69.7 108 37.0
Peaxi162Scf00366g00032 Petunia axillaris HOM05D012291 ORTHO05D010445 1.7e-09 68.2 69 47.8
Aqoxy5G01607 Aquilegia oxysepala HOM05D009163 ORTHO05D010445 9.3e-08 62.4 85 42.4
Potri.005G122400 Populus trichocarpa HOM05D009163 ORTHO05D010445 1.6e-07 61.6 76 40.8
CAN.G358.71 Capsicum annuum HOM05D012291 ORTHO05D010445 2.7e-07 60.8 95 36.8
Sabra05G0100500 Salix brachista HOM05D009163 ORTHO05D010445 3.5e-07 60.5 105 32.4
TAR625G0639 Trochodendron aralioides HOM05D009163 ORTHO05D010445 3.5e-07 60.5 130 29.2
CSS0010032 Camellia sinensis var. sinensis HOM05D009163 ORTHO05D010445 4.6e-07 60.1 112 36.6
Manes.01G135700 Manihot esculenta HOM05D009163 ORTHO05D010445 4.6e-07 60.1 110 39.1
Nitab4.5_0003232g0030 Nicotiana tabacum HOM05D012291 ORTHO05D010445 1.3e-06 58.5 68 45.6
Potri.007G024000 Populus trichocarpa HOM05D009163 ORTHO05D010445 1.3e-06 58.5 99 31.3
Prupe.I002400 Prunus persica HOM05D028013 ORTHO05D010445 1.3e-06 58.5 116 31.9
Sed0013344 Sechium edule HOM05D015520 ORTHO05D010445 3.0e-06 57.4 119 33.6
Glyma.11G068900 Glycine max HOM05D013452 ORTHO05D013216 3.9e-06 57.0 103 35.0
ClCG07G008530 Citrullus lanatus HOM05D015520 ORTHO05D010445 6.7e-06 56.2 107 33.6
PSO675G5326 Papaver somniferum HOM05D009163 ORTHO05D010445 6.7e-06 56.2 111 35.1
CSS0029219 Camellia sinensis var. sinensis HOM05D009163 ORTHO05D010445 8.7e-06 55.8 111 33.3


User provided reference genes

Program Settings