Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 1.9e-22 108.2 51 100.0
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 1.3e-15 85.5 50 74.0
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 8.4e-15 82.8 50 74.0
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 9.2e-14 79.3 50 68.0
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 1.6e-13 78.6 50 66.0
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 2.7e-13 77.8 50 66.0
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 2.7e-13 77.8 50 66.0
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 2.7e-13 77.8 50 68.0
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 3.5e-13 77.4 50 66.0
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 7.8e-13 76.3 50 66.0
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 7.8e-13 76.3 50 66.0
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 2.3e-12 74.7 50 60.0
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 3.0e-12 74.3 50 62.0
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 3.0e-12 74.3 50 62.0
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 3.9e-12 73.9 47 63.8
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 3.9e-12 73.9 50 62.0
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 6.6e-12 73.2 50 60.0
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 6.6e-12 73.2 50 62.0
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 6.6e-12 73.2 50 58.0
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 8.7e-12 72.8 50 60.0
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 8.7e-12 72.8 50 60.0
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 8.7e-12 72.8 50 62.0
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 1.1e-11 72.4 50 62.0
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 1.1e-11 72.4 50 60.0
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 1.5e-11 72.0 50 60.0
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 1.5e-11 72.0 50 60.0
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 1.9e-11 71.6 50 60.0
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 1.9e-11 71.6 50 60.0
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 1.9e-11 71.6 50 62.0
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 2.5e-11 71.2 50 58.0
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 3.3e-11 70.9 50 60.0
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 3.3e-11 70.9 51 56.9
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 3.3e-11 70.9 50 56.0
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 4.3e-11 70.5 50 58.0
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 4.3e-11 70.5 50 56.0
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 4.3e-11 70.5 50 56.0
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 4.3e-11 70.5 50 56.0
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 4.3e-11 70.5 50 58.0
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 4.3e-11 70.5 50 58.0
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 4.3e-11 70.5 50 60.0
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 5.6e-11 70.1 50 56.0
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 5.6e-11 70.1 50 60.0
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 7.3e-11 69.7 50 56.0
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 7.3e-11 69.7 50 58.0
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 7.3e-11 69.7 47 59.6
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 9.6e-11 69.3 47 59.6
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 1.3e-10 68.9 47 59.6
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 1.3e-10 68.9 50 54.0
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 1.6e-10 68.6 50 58.0
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 1.6e-10 68.6 50 58.0
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 2.1e-10 68.2 45 62.2
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 2.1e-10 68.2 50 60.0
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 2.8e-10 67.8 50 56.0
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 2.8e-10 67.8 50 58.0
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 3.6e-10 67.4 50 56.0
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 3.6e-10 67.4 45 57.8
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 4.8e-10 67.0 50 54.0
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 4.8e-10 67.0 51 54.9
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 6.2e-10 66.6 50 48.0
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 1.1e-09 65.9 44 63.6
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 1.1e-09 65.9 50 54.0
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 1.1e-09 65.9 50 54.0
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 1.4e-09 65.5 50 52.0
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 1.4e-09 65.5 50 54.0
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.8e-09 65.1 50 54.0
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 2.4e-09 64.7 50 52.0
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 2.4e-09 64.7 50 48.0
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 3.1e-09 64.3 50 50.0
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 3.1e-09 64.3 50 46.0
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 3.1e-09 64.3 50 52.0
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 3.1e-09 64.3 50 54.0
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 4.0e-09 63.9 50 52.0
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 4.0e-09 63.9 44 59.1
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 4.0e-09 63.9 50 48.0
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 5.3e-09 63.5 48 54.2
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 5.3e-09 63.5 50 50.0
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 5.3e-09 63.5 50 54.0
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 5.3e-09 63.5 50 54.0
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 5.3e-09 63.5 44 61.4
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 5.3e-09 63.5 44 61.4
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 5.3e-09 63.5 44 59.1
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 9.0e-09 62.8 45 57.8
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 9.0e-09 62.8 47 48.9
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 9.0e-09 62.8 50 46.0
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 9.0e-09 62.8 46 54.3
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 1.2e-08 62.4 44 61.4
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 1.5e-08 62.0 48 58.3
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 1.5e-08 62.0 50 54.0
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 1.5e-08 62.0 50 56.0
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 2.0e-08 61.6 50 42.0
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 2.0e-08 61.6 44 56.8
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 2.0e-08 61.6 44 56.8
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 2.6e-08 61.2 42 57.1
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 2.6e-08 61.2 44 56.8
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 3.4e-08 60.8 50 54.0
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 4.4e-08 60.5 48 56.2
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 5.8e-08 60.1 50 44.0
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 9.9e-08 59.3 43 55.8
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 1.7e-07 58.5 50 52.0
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 2.2e-07 58.2 50 52.0
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 2.2e-07 58.2 50 52.0
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 3.8e-07 57.4 50 52.0
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 4.9e-07 57.0 51 54.9
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 4.9e-07 57.0 50 52.0
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 1.4e-06 55.5 44 43.2
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 1.4e-06 55.5 44 43.2
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 1.4e-06 55.5 43 46.5
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 1.9e-06 55.1 62 37.1
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 1.9e-06 55.1 62 37.1
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 2.4e-06 54.7 40 50.0
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 2.4e-06 54.7 46 52.2
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 3.2e-06 54.3 44 47.7
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 4.2e-06 53.9 51 39.2
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 5.4e-06 53.5 48 54.2
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 7.1e-06 53.1 47 48.9
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 9.3e-06 52.8 43 41.9


User provided reference genes

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