Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042194.1 Olea europaea HOM05D000595 ORTHO05D004141 2.4e-98 362.1 173 100.0
Oeu042195.1 Olea europaea HOM05D000595 ORTHO05D004141 1.2e-94 349.7 169 98.8
Oeu042200.2 Olea europaea HOM05D000595 ORTHO05D004141 5.1e-80 301.2 191 78.5
MSTRG.24716 Avicennia marina HOM05D000595 ORTHO05D004141 1.1e-66 256.9 191 63.9
Dinv37419 Davidia involucrata HOM05D000595 ORTHO05D004141 2.3e-64 249.2 191 63.9
SGA_v2.0_scaffold111G31354 Striga asiatica HOM05D000595 ORTHO05D004141 8.7e-64 247.3 191 62.3
Lj8A330G11 Lonicera japonica HOM05D000595 ORTHO05D004141 3.3e-63 245.4 191 62.3
Migut.E01361 Erythranthe guttata HOM05D000595 ORTHO05D004141 1.3e-62 243.4 192 62.0
SalBow4G2071 Salvia bowleyana HOM05D000595 ORTHO05D004141 1.3e-62 243.4 191 62.3
Peaxi162Scf00053g00618 Petunia axillaris HOM05D000595 ORTHO05D004141 1.6e-62 243.0 191 60.7
CSS0032199 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 3.1e-61 238.8 191 60.2
Cc00_g19580 Coffea canephora HOM05D000595 ORTHO05D004141 4.0e-61 238.4 191 59.7
Actinidia32782 Actinidia chinensis HOM05D000595 ORTHO05D004141 9.0e-61 237.3 191 61.8
Medtr5g026610 Medicago truncatula HOM05D000595 ORTHO05D004141 1.5e-60 236.5 193 58.0
CAN.G1731.5 Capsicum annuum HOM05D000595 ORTHO05D004141 2.0e-60 236.1 193 58.0
Cc08_g05430 Coffea canephora HOM05D000595 ORTHO05D004141 2.0e-60 236.1 180 61.7
TAR629G2634 Trochodendron aralioides HOM05D000595 ORTHO05D004141 3.4e-60 235.3 191 59.2
Nitab4.5_0000030g0360 Nicotiana tabacum HOM05D000595 ORTHO05D004141 5.8e-60 234.6 191 58.6
Nitab4.5_0000985g0070 Nicotiana tabacum HOM05D000595 ORTHO05D004141 7.6e-60 234.2 191 59.2
Solyc08g075530.3 Solanum lycopersicum HOM05D000595 ORTHO05D004141 7.6e-60 234.2 191 59.7
Ca_25085_v3 Cicer arietinum L. HOM05D000595 ORTHO05D004141 1.0e-59 233.8 195 57.4
Sopen08g024190 Solanum pennellii HOM05D000595 ORTHO05D004141 1.3e-59 233.4 191 59.7
Rhsim11G0034700 Rhododendron simsii HOM05D000595 ORTHO05D004141 2.9e-59 232.3 191 58.6
DCAR_004519 Daucus carota HOM05D000595 ORTHO05D004141 3.8e-59 231.9 191 60.2
Glyma.04G123900 Glycine max HOM05D000595 ORTHO05D004141 3.8e-59 231.9 194 59.3
Prupe.5G018900 Prunus persica HOM05D000595 ORTHO05D004141 4.9e-59 231.5 191 59.2
Psat2g142760 Pisum sativum HOM05D000595 ORTHO05D004141 6.5e-59 231.1 194 57.7
TPR.G17247 Trifolium pratense HOM05D000595 ORTHO05D004141 1.4e-58 229.9 193 58.0
GSVIVG01022815001 Vitis vinifera HOM05D000595 ORTHO05D004141 1.9e-58 229.6 191 58.6
MD00G1148100 Malus domestica HOM05D000595 ORTHO05D004141 3.2e-58 228.8 191 57.6
Oeu042206.1 Olea europaea HOM05D000595 ORTHO05D004141 3.2e-58 228.8 178 66.9
Phvul.002G127000 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 5.5e-58 228.0 193 58.5
AUR62007422 Chenopodium quinoa HOM05D000595 ORTHO05D004141 1.2e-57 226.9 191 58.1
Psat2g142920 Pisum sativum HOM05D000595 ORTHO05D004141 2.1e-57 226.1 195 56.9
EL10Ac5g11905 Beta vulgaris HOM05D000595 ORTHO05D004141 2.7e-57 225.7 191 57.1
Oeu042203.1 Olea europaea HOM05D000595 ORTHO05D004141 2.7e-57 225.7 191 61.3
QL02p060347 Quercus lobata HOM05D000595 ORTHO05D004141 4.6e-57 224.9 192 57.3
QL02p060306 Quercus lobata HOM05D000595 ORTHO05D004141 1.0e-56 223.8 192 56.8
FAN16G0455 Fragaria x ananassa HOM05D000595 ORTHO05D004141 1.8e-56 223.0 182 59.9
TPR.G17274 Trifolium pratense HOM05D000595 ORTHO05D004141 1.8e-56 223.0 193 55.4
VMungo1215G0102 Vigna mungo HOM05D000595 ORTHO05D004141 3.9e-56 221.9 193 57.0
Atru.chr6.1509 Acer truncatum HOM05D000595 ORTHO05D004141 5.1e-56 221.5 191 56.5
Hund14328 Selenicereus undatus HOM05D000595 ORTHO05D004141 5.1e-56 221.5 191 57.6
FAN13G2264 Fragaria x ananassa HOM05D000595 ORTHO05D004141 6.7e-56 221.1 191 57.6
TPR.G39643 Trifolium pratense HOM05D000595 ORTHO05D004141 8.7e-56 220.7 208 51.9
vmacro00079 Vaccinium macrocarpon HOM05D000595 ORTHO05D004141 1.1e-55 220.3 217 52.1
Lj2g0003822 Lotus japonicus HOM05D000595 ORTHO05D004141 1.9e-55 219.5 193 54.9
HanXRQChr17g0537211 Helianthus annuus HOM05D000595 ORTHO05D004141 2.5e-55 219.2 187 56.1
Manes.15G187301 Manihot esculenta HOM05D000595 ORTHO05D004141 3.3e-55 218.8 191 57.1
TWI60G0525 Tripterygium wilfordii HOM05D000595 ORTHO05D004141 3.3e-55 218.8 187 57.2
CSS0018432 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D004141 4.3e-55 218.4 190 57.4
FvH4_5g24150 Fragaria vesca HOM05D000595 ORTHO05D004141 4.3e-55 218.4 191 57.6
Migut.A00539 Erythranthe guttata HOM05D000595 ORTHO05D004141 5.7e-55 218.0 176 61.4
AUR62027310 Chenopodium quinoa HOM05D000595 ORTHO05D004141 9.6e-55 217.2 201 54.7
arahy.Tifrunner.gnm1.ann1.BJDV4A Arachis hypogaea HOM05D000595 ORTHO05D004141 2.8e-54 215.7 194 54.1
arahy.Tifrunner.gnm1.ann1.NQH3GN Arachis hypogaea HOM05D000595 ORTHO05D004141 2.8e-54 215.7 194 54.1
Eucgr.E01209 Eucalyptus grandis HOM05D000595 ORTHO05D004141 2.8e-54 215.7 187 56.1
CiPaw.11G104000 Carya illinoinensis HOM05D000595 ORTHO05D004141 3.7e-54 215.3 192 56.2
RcHm_v2.0_Chr7g0213851 Rosa chinensis HOM05D000595 ORTHO05D004141 3.7e-54 215.3 191 56.5
Haze_07995 Corylus avellana HOM05D000595 ORTHO05D004141 4.8e-54 214.9 192 55.7
Lalb_Chr09g0325191 Lupinus albus HOM05D000595 ORTHO05D004141 4.8e-54 214.9 193 54.9
Sc07g0008260 Simmondsia chinensis HOM05D000595 ORTHO05D004141 8.2e-54 214.2 191 57.1
Aqoxy3G02180 Aquilegia oxysepala HOM05D000595 ORTHO05D004141 1.1e-53 213.8 191 55.5
Eucgr.E01212 Eucalyptus grandis HOM05D000595 ORTHO05D004141 1.1e-53 213.8 187 56.1
Oeu042228.5 Olea europaea HOM05D000595 ORTHO05D004141 1.1e-53 213.8 174 60.9
Cfa012657 Carpinus fangiana HOM05D000595 ORTHO05D004141 1.4e-53 213.4 192 55.7
DCAR_004520 Daucus carota HOM05D000595 ORTHO05D004141 2.4e-53 212.6 191 53.9
ClCG10G000900 Citrullus lanatus HOM05D000595 ORTHO05D004141 3.1e-53 212.2 183 56.8
Ciclev10000152m.g Citrus clementina HOM05D000595 ORTHO05D004141 3.1e-53 212.2 182 57.7
Nn1g02038 Nelumbo nucifera HOM05D000595 ORTHO05D004141 4.1e-53 211.8 191 54.5
Lalb_Chr16g0380651 Lupinus albus HOM05D000595 ORTHO05D004141 2.0e-52 209.5 193 52.3
PSO782G2105 Papaver somniferum HOM05D000595 ORTHO05D004141 2.0e-52 209.5 191 55.5
Thecc.10G189800 Theobroma cacao HOM05D000595 ORTHO05D004141 2.6e-52 209.1 191 53.4
Ciclev10002552m.g Citrus clementina HOM05D000595 ORTHO05D004141 3.4e-52 208.8 183 55.7
Cpa.g.sc71.57 Carica papaya HOM05D000595 ORTHO05D004141 5.8e-52 208.0 191 54.5
Sed0017541 Sechium edule HOM05D000595 ORTHO05D004141 7.6e-52 207.6 191 53.9
PGR042G2013 Punica granatum HOM05D000595 ORTHO05D004141 1.0e-51 207.2 184 54.3
Potri.001G129600 Populus trichocarpa HOM05D000595 ORTHO05D004141 2.2e-51 206.1 187 53.5
Duzib116G0855 Durio zibethinus HOM05D000595 ORTHO05D004141 2.9e-51 205.7 191 53.4
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 3.8e-51 205.3 192 53.6
Thecc.03G325300 Theobroma cacao HOM05D000595 ORTHO05D004141 5.0e-51 204.9 191 52.9
VMungo1215G1352 Vigna mungo HOM05D000595 ORTHO05D004141 8.4e-51 204.1 193 54.4
MELO3C013786.2 Cucumis melo HOM05D000595 ORTHO05D004141 1.1e-50 203.8 183 54.6
MBI04_g21145_MAGBIO Magnolia biondii HOM05D000595 ORTHO05D004141 1.9e-50 203.0 192 55.2
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 1.9e-50 203.0 193 54.4
Sabra01G0099900 Salix brachista HOM05D000595 ORTHO05D004141 1.9e-50 203.0 187 53.5
Lsat_1_v5_gn_3_23561 Lactuca sativa HOM05D000595 ORTHO05D004141 2.5e-50 202.6 196 52.0
CsaV3_3G000980 Cucumis sativus L. HOM05D000595 ORTHO05D004141 4.2e-50 201.8 183 54.6
PSO384G3519 Papaver somniferum HOM05D000595 ORTHO05D004141 4.2e-50 201.8 179 58.7
Thhalv10019990m.g Eutrema salsugineum HOM05D000595 ORTHO05D004141 5.5e-50 201.4 174 56.3
Gohir.A02G091200 Gossypium hirsutum HOM05D000595 ORTHO05D004141 9.3e-50 200.7 191 51.8
Gohir.D02G109400 Gossypium hirsutum HOM05D000595 ORTHO05D004141 9.3e-50 200.7 191 51.8
Gorai.005G124100 Gossypium raimondii HOM05D000595 ORTHO05D004141 9.3e-50 200.7 191 51.8
AT3G23640 Arabidopsis thaliana HOM05D000595 ORTHO05D004141 1.6e-49 199.9 180 55.0
Carub.0003s2391 Capsella rubella HOM05D000595 ORTHO05D004141 2.7e-49 199.1 174 55.2
Aa31LG10G5270 Aethionema arabicum HOM05D000595 ORTHO05D004141 4.6e-49 198.4 186 53.2
AL3G38380 Arabidopsis lyrata HOM05D000595 ORTHO05D004141 4.6e-49 198.4 182 54.4
PSO384G3949 Papaver somniferum HOM05D000595 ORTHO05D004141 4.6e-49 198.4 176 57.4
Carub.0003s2390 Capsella rubella HOM05D000595 ORTHO05D004141 1.0e-48 197.2 182 52.7
GSVIVG01036945001 Vitis vinifera HOM05D000595 ORTHO05D004141 1.0e-48 197.2 174 56.3
CDE01G0028 Ceratophyllum demersum HOM05D000595 ORTHO05D004141 1.3e-48 196.8 180 54.4
A01p31410 Brassica napus HOM05D000595 ORTHO05D004141 3.9e-48 195.3 175 54.3
BraA01t03266Z Brassica rapa HOM05D000595 ORTHO05D004141 3.9e-48 195.3 175 54.3
ECA246G1180 Erigeron canadensis HOM05D000595 ORTHO05D004141 3.9e-48 195.3 180 53.3
Migut.E01363 Erythranthe guttata HOM05D000595 ORTHO05D004141 5.1e-48 194.9 184 55.4
Duzib116G0431 Durio zibethinus HOM05D000595 ORTHO05D004141 6.7e-48 194.5 191 51.3
HPP92_020874 Vanilla planifolia HOM05D000595 ORTHO05D004141 6.7e-48 194.5 180 52.8
C01p40000 Brassica napus HOM05D000595 ORTHO05D004141 1.1e-47 193.7 175 53.7
BolC1t03957H Brassica oleracea HOM05D000595 ORTHO05D004141 1.1e-47 193.7 175 53.7
BcaB04g20429 Brassica carinata HOM05D000595 ORTHO05D004141 1.5e-47 193.4 183 53.6
THA.LOC104822230 Tarenaya hassleriana HOM05D000595 ORTHO05D004141 1.5e-47 193.4 187 50.8
Sp3g21340 Schrenkiella parvula HOM05D000595 ORTHO05D004141 1.9e-47 193.0 182 52.7
Manes.17G004600 Manihot esculenta HOM05D000595 ORTHO05D004141 7.4e-47 191.0 192 51.6
HPP92_028113 Vanilla planifolia HOM05D000595 ORTHO05D004141 9.7e-47 190.7 180 52.2
BraA01t03265Z Brassica rapa HOM05D000595 ORTHO05D004141 1.3e-46 190.3 181 51.9
C01p39990 Brassica napus HOM05D000595 ORTHO05D004141 8.2e-46 187.6 181 51.4
ATR0829G165 Amborella trichopoda HOM05D000595 ORTHO05D004141 1.4e-45 186.8 191 50.8
A01p31400 Brassica napus HOM05D000595 ORTHO05D004141 6.9e-45 184.5 185 50.8
BcaB04g20431 Brassica carinata HOM05D000595 ORTHO05D004141 9.0e-45 184.1 175 52.6
CARHR099600 Cardamine hirsuta HOM05D000595 ORTHO05D004141 7.7e-44 181.0 182 50.5
SEGI_21462 Sequoiadendron giganteum HOM05D000595 ORTHO05D004141 7.7e-44 181.0 178 50.6
ECA246G0927 Erigeron canadensis HOM05D000595 ORTHO05D004141 1.0e-40 170.6 186 47.8
Os07g0420700 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 1.9e-34 149.8 185 44.9
Zm00001eb305980 Zea mays HOM05D000595 ORTHO05D004141 2.5e-34 149.4 177 45.2
Ciclev10011016m.g Citrus clementina HOM05D000595 ORTHO05D004141 3.2e-34 149.1 165 50.9
Mapoly0135s0001 Marchantia polymorpha HOM05D000595 ORTHO05D004141 9.4e-34 147.5 179 43.0
Os07g0421300 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D004141 4.7e-33 145.2 178 46.6
SGA_v2.0_scaffold89G27418 Striga asiatica HOM05D000595 ORTHO05D004141 4.7e-33 145.2 179 43.6
Pp3c4_24030 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.2e-30 136.3 176 40.9
Pp3c3_9200 Physcomitrium patens HOM05D000595 ORTHO05D004141 6.3e-30 134.8 170 41.8
Pp3c5_4460 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.8e-29 133.3 177 40.1
Lj8A331G39 Lonicera japonica HOM05D000595 ORTHO05D004141 7.0e-29 131.3 82 72.0
Lsat_1_v5_gn_6_67241 Lactuca sativa HOM05D000595 ORTHO05D004141 1.5e-28 130.2 125 49.6
Pp3c13_11140 Physcomitrium patens HOM05D000595 ORTHO05D004141 1.5e-28 130.2 169 41.4
SMO116G0166 Selaginella moellendorffii HOM05D000595 ORTHO05D004141 1.7e-27 126.7 177 39.5
Pp3c16_2470 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.9e-27 125.9 190 37.9
Zm00001eb096920 Zea mays HOM05D000595 ORTHO05D004141 2.1e-25 119.8 86 62.8
COL.COLO4_06174 Corchorus olitorius HOM05D000595 ORTHO05D004141 3.6e-25 119.0 169 40.8
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis HOM05D000595 ORTHO05D004141 1.8e-24 116.7 186 37.6
AagrBONN_evm.TU.Sc2ySwM_228.2586 Anthoceros agrestis HOM05D000595 ORTHO05D004141 8.8e-24 114.4 188 38.8
FAN16G3365 Fragaria x ananassa HOM05D001806 ORTHO05D013993 4.1e-21 105.5 82 59.8
PGSC0003DMG400007975 Solanum tuberosum HOM05D000595 ORTHO05D004141 4.7e-17 92.0 62 67.7
Ciclev10013908m.g Citrus clementina HOM05D000595 ORTHO05D004141 3.0e-16 89.4 88 50.0
FAN09G4858 Fragaria x ananassa HOM05D001806 ORTHO05D013993 5.2e-16 88.6 66 62.1
RcHm_v2.0_Chr7g0213741 Rosa chinensis HOM05D000595 ORTHO05D004141 1.6e-12 77.0 43 79.1
Cpa.g.c48289 Carica papaya HOM05D000595 ORTHO05D004141 1.0e-11 74.3 46 71.7
Pp3c19_14150 Physcomitrium patens HOM05D000595 ORTHO05D004141 2.6e-07 59.7 115 33.0


User provided reference genes

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