Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 4.9e-263 910.6 466 100.0
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 4.2e-262 907.5 466 99.8
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 3.7e-234 814.7 471 89.8
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 2.3e-196 689.1 475 75.8
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.7e-191 672.9 441 78.0
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 2.6e-187 659.1 450 76.2
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 8.6e-183 644.0 469 72.3
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 4.3e-182 641.7 464 72.8
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 9.5e-182 640.6 464 72.6
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 3.6e-181 638.6 437 74.4
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 8.0e-181 637.5 453 74.6
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 1.1e-180 637.1 467 72.6
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 3.1e-180 635.6 450 74.4
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 2.6e-179 632.5 464 71.6
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.6e-179 632.5 464 72.6
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 5.4e-177 624.8 431 75.6
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 9.2e-177 624.0 462 70.8
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.2e-176 623.6 454 73.1
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 3.0e-175 619.0 450 72.9
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 5.1e-175 618.2 452 72.8
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 5.2e-172 608.2 466 69.1
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 6.8e-172 607.8 452 71.7
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.4e-171 605.5 504 65.3
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 3.4e-171 605.5 428 72.9
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 8.3e-170 600.9 479 68.9
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 7.1e-169 597.8 396 77.3
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 4.6e-168 595.1 396 77.0
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 1.1e-166 590.5 392 77.0
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.6e-165 586.6 433 71.6
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.7e-165 585.1 419 73.5
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.8e-164 583.2 395 76.2
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 5.2e-164 581.6 434 70.5
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.3e-162 577.0 385 76.1
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 2.2e-162 576.2 478 65.1
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 4.9e-162 575.1 396 74.2
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 4.9e-162 575.1 426 70.4
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 2.4e-161 572.8 377 76.1
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 5.4e-161 571.6 383 75.7
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 1.6e-160 570.1 433 67.7
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.6e-160 570.1 381 75.6
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 2.1e-160 569.7 419 70.4
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 3.5e-160 568.9 393 73.8
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 5.1e-159 565.1 418 71.5
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 5.1e-159 565.1 374 75.4
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 5.1e-159 565.1 396 73.2
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 2.5e-158 562.8 395 72.7
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 5.6e-158 561.6 393 73.8
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 7.3e-158 561.2 406 71.4
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.8e-157 559.3 395 73.7
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 8.1e-157 557.8 417 70.7
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 8.1e-157 557.8 393 73.3
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 4.0e-156 555.4 391 72.4
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 6.9e-156 554.7 439 67.7
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 6.9e-156 554.7 406 71.7
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 1.2e-155 553.9 382 73.8
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.2e-155 553.9 468 64.3
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 5.8e-155 551.6 391 71.6
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 2.2e-154 549.7 360 77.2
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 2.9e-154 549.3 407 69.5
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 2.4e-153 546.2 422 68.7
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 4.2e-153 545.4 407 69.5
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 4.2e-153 545.4 406 69.7
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 4.2e-153 545.4 407 69.5
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 2.1e-152 543.1 440 68.2
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 4.6e-152 542.0 394 71.3
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 1.7e-151 540.0 423 67.8
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 3.9e-151 538.9 433 67.9
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.9e-150 536.6 402 70.6
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 3.3e-150 535.8 391 70.3
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 4.8e-149 531.9 423 65.7
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.4e-148 530.4 409 68.7
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 6.0e-144 515.0 481 59.0
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 1.0e-143 514.2 387 68.5
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 3.9e-143 512.3 435 63.9
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.3e-142 509.2 333 77.5
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 5.6e-142 508.4 439 62.4
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.6e-141 506.9 333 77.2
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 2.6e-139 499.6 386 69.4
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 4.9e-138 495.4 401 64.6
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 8.4e-138 494.6 386 69.2
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 1.9e-137 493.4 440 62.5
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.1e-132 477.6 400 64.0
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 2.4e-132 476.5 370 67.8
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 5.8e-131 471.9 395 64.3
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 7.6e-131 471.5 391 63.2
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 8.7e-127 458.0 400 61.8
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 6.3e-125 451.8 367 63.8
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 5.3e-124 448.7 466 56.4
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 1.2e-120 437.6 468 55.8
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 4.6e-120 435.6 330 68.2
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 4.3e-118 429.1 431 57.3
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 1.3e-117 427.6 423 58.9
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.8e-116 423.7 409 59.4
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 9.1e-116 421.4 410 59.5
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 1.5e-115 420.6 479 54.3
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 2.6e-115 419.9 400 59.5
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 8.5e-114 414.8 391 60.9
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 1.4e-113 414.1 487 52.6
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.4e-108 397.5 415 56.1
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 1.6e-107 394.0 412 56.8
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 1.6e-107 394.0 412 56.8
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 7.7e-107 391.7 393 58.0
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 7.7e-107 391.7 393 58.0
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 3.3e-102 376.3 325 63.1
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 3.7e-101 372.9 404 54.7
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 6.3e-101 372.1 381 56.7
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.0e-91 340.5 235 73.6
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.2e-85 320.5 239 70.3
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 2.8e-80 303.5 410 51.0
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 7.0e-68 262.3 363 42.4
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 2.4e-60 237.3 160 75.6
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 9.5e-57 225.3 423 35.9
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 3.7e-53 213.4 440 33.6
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 6.4e-53 212.6 139 75.5
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 1.1e-47 195.3 391 36.3
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 1.8e-47 194.5 152 65.8
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 7.6e-46 189.1 416 37.0
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 1.3e-42 178.3 124 71.8
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 1.7e-42 177.9 160 60.6
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.5e-41 174.9 117 75.2
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 6.4e-37 159.5 122 68.0
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 4.0e-31 140.2 201 43.3
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 4.3e-25 120.2 308 30.8
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 3.4e-22 110.5 126 50.8
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 1.0e-21 109.0 78 67.9
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 1.2e-19 102.1 79 65.8
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.8e-10 71.6 212 31.6
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 3.0e-10 70.9 240 27.5
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 3.0e-10 70.9 267 26.6
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.1e-09 68.9 403 23.6
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 1.9e-09 68.2 272 25.0
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 7.4e-09 66.2 417 24.0
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 9.7e-09 65.9 271 24.4
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 3.7e-08 63.9 417 23.3
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 8.2e-08 62.8 412 23.8
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 1.8e-07 61.6 389 24.9
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 5.3e-07 60.1 402 22.9
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 6.9e-07 59.7 432 24.3
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 6.9e-07 59.7 296 23.6
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 9.0e-07 59.3 61 54.1
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 9.0e-07 59.3 278 23.0
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 9.0e-07 59.3 399 22.1
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.2e-06 58.9 399 23.6
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.2e-06 58.9 368 25.0
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.5e-06 58.5 276 25.7
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 2.0e-06 58.2 399 22.3
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 2.6e-06 57.8 366 24.3
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 3.4e-06 57.4 398 22.1
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 3.4e-06 57.4 388 23.7
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 4.5e-06 57.0 279 24.4
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 4.5e-06 57.0 278 24.1
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 7.7e-06 56.2 391 24.0


User provided reference genes

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