Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042151.1 Olea europaea HOM05D003511 ORTHO05D004403 9.1e-105 383.6 203 100.0
Oeu029532.2 Olea europaea HOM05D003511 ORTHO05D004403 2.0e-80 302.8 145 100.0
Oeu013759.1 Olea europaea HOM05D003511 ORTHO05D004403 9.8e-75 283.9 149 89.9
Lj5C215T12 Lonicera japonica HOM05D003511 ORTHO05D004403 4.0e-68 261.9 153 81.7
Actinidia34394 Actinidia chinensis HOM05D003511 ORTHO05D004403 9.9e-67 257.3 166 73.5
Dinv15773 Davidia involucrata HOM05D003511 ORTHO05D004403 9.9e-67 257.3 166 75.3
Dinv42203 Davidia involucrata HOM05D003511 ORTHO05D004403 2.9e-66 255.8 166 74.1
DCAR_001655 Daucus carota HOM05D003511 ORTHO05D004403 4.1e-65 251.9 157 75.2
vmacro01992 Vaccinium macrocarpon HOM05D003511 ORTHO05D004403 4.1e-65 251.9 167 72.5
Ciclev10027816m.g Citrus clementina HOM05D003511 ORTHO05D004403 7.1e-65 251.1 161 73.9
Potri.009G093900 Populus trichocarpa HOM05D003511 ORTHO05D004403 7.1e-65 251.1 166 73.5
Haze_10199 Corylus avellana HOM05D003511 ORTHO05D004403 9.2e-65 250.8 166 72.9
QL11p032729 Quercus lobata HOM05D003511 ORTHO05D004403 2.1e-64 249.6 166 72.3
Atru.chr5.2454 Acer truncatum HOM05D003511 ORTHO05D004403 7.8e-64 247.7 166 71.7
CSS0033371 Camellia sinensis var. sinensis HOM05D003511 ORTHO05D004403 7.8e-64 247.7 163 74.2
Hma1.2p1_1518F.1_g288460 Hydrangea macrophylla HOM05D003511 ORTHO05D004403 7.8e-64 247.7 151 78.1
Atru.chr5.2456 Acer truncatum HOM05D003511 ORTHO05D004403 1.0e-63 247.3 166 71.7
TPR.G19062 Trifolium pratense HOM05D003511 ORTHO05D004403 1.7e-63 246.5 154 76.6
Prupe.8G137300 Prunus persica HOM05D003511 ORTHO05D004403 2.3e-63 246.1 165 73.3
TAR381G0463 Trochodendron aralioides HOM05D003511 ORTHO05D004403 3.9e-63 245.4 164 72.6
Cpa.g.sc106.113 Carica papaya HOM05D003511 ORTHO05D004403 6.6e-63 244.6 160 75.0
CiPaw.05G013100 Carya illinoinensis HOM05D003511 ORTHO05D004403 6.6e-63 244.6 166 69.3
Migut.B00398 Erythranthe guttata HOM05D003511 ORTHO05D004403 8.6e-63 244.2 151 76.8
Glyma.20G130366 Glycine max HOM05D003511 ORTHO05D004403 1.9e-62 243.0 165 72.7
Manes.10G075800 Manihot esculenta HOM05D003511 ORTHO05D004403 1.9e-62 243.0 165 72.7
GSVIVG01037900001 Vitis vinifera HOM05D003511 ORTHO05D004403 2.5e-62 242.7 151 77.5
MSTRG.20193 Avicennia marina HOM05D003511 ORTHO05D004403 3.3e-62 242.3 153 74.5
Potri.001G299000 Populus trichocarpa HOM05D003511 ORTHO05D004403 3.3e-62 242.3 166 70.5
Hma1.2p1_1518F.1_g288470 Hydrangea macrophylla HOM05D003511 ORTHO05D004403 4.3e-62 241.9 166 70.5
Psat6g217200 Pisum sativum HOM05D003511 ORTHO05D004403 4.3e-62 241.9 151 75.5
Ca_11061_v3 Cicer arietinum L. HOM05D003511 ORTHO05D004403 7.3e-62 241.1 155 74.8
Glyma.10G260900 Glycine max HOM05D003511 ORTHO05D004403 7.3e-62 241.1 165 72.1
Lj5g0008514 Lotus japonicus HOM05D003511 ORTHO05D004403 1.2e-61 240.4 165 72.1
Glyma.20G130432 Glycine max HOM05D003511 ORTHO05D004403 1.6e-61 240.0 165 71.5
Atru.chr5.2453 Acer truncatum HOM05D003511 ORTHO05D004403 2.1e-61 239.6 165 69.7
MD10G1099200 Malus domestica HOM05D003511 ORTHO05D004403 2.1e-61 239.6 163 71.8
FAN24G0829 Fragaria x ananassa HOM05D003511 ORTHO05D004403 2.8e-61 239.2 176 68.2
MD10G1099400 Malus domestica HOM05D003511 ORTHO05D004403 4.7e-61 238.4 163 71.2
Phvul.007G041400 Phaseolus vulgaris HOM05D003511 ORTHO05D004403 4.7e-61 238.4 163 71.2
CANSAT25G1711 Cannabis sativa HOM05D003511 ORTHO05D004403 8.1e-61 237.7 151 74.8
DCAR_001656 Daucus carota HOM05D003511 ORTHO05D004403 8.1e-61 237.7 158 72.2
FvH4_2g04810 Fragaria vesca HOM05D003511 ORTHO05D004403 8.1e-61 237.7 165 71.5
FAN15G2851 Fragaria x ananassa HOM05D003511 ORTHO05D004403 8.1e-61 237.7 165 71.5
PSO541G1166 Papaver somniferum HOM05D003511 ORTHO05D004403 8.1e-61 237.7 151 72.2
FAN27G0709 Fragaria x ananassa HOM05D003511 ORTHO05D004403 1.1e-60 237.3 165 72.1
Sed0023024 Sechium edule HOM05D003511 ORTHO05D004403 1.1e-60 237.3 152 72.4
Sabra16G0187700 Salix brachista HOM05D003511 ORTHO05D004403 1.4e-60 236.9 166 68.7
DCAR_029092 Daucus carota HOM05D003511 ORTHO05D004403 1.8e-60 236.5 158 71.5
Gohir.A12G021400 Gossypium hirsutum HOM05D003511 ORTHO05D004403 2.4e-60 236.1 166 68.7
COL.COLO4_32574 Corchorus olitorius HOM05D003511 ORTHO05D004403 3.1e-60 235.7 151 72.8
Rhsim10G0162400 Rhododendron simsii HOM05D003511 ORTHO05D004403 3.1e-60 235.7 170 67.1
Thecc.02G110900 Theobroma cacao HOM05D003511 ORTHO05D004403 3.1e-60 235.7 166 69.3
Lalb_Chr06g0165351 Lupinus albus HOM05D003511 ORTHO05D004403 5.2e-60 235.0 165 69.1
Duzib052G0193 Durio zibethinus HOM05D003511 ORTHO05D004403 6.8e-60 234.6 166 69.3
Duzib132G0449 Durio zibethinus HOM05D003511 ORTHO05D004403 6.8e-60 234.6 166 70.5
Gohir.D12G021900 Gossypium hirsutum HOM05D003511 ORTHO05D004403 6.8e-60 234.6 166 69.3
Gorai.008G022200 Gossypium raimondii HOM05D003511 ORTHO05D004403 6.8e-60 234.6 166 69.3
Thecc.02G111000 Theobroma cacao HOM05D003511 ORTHO05D004403 6.8e-60 234.6 151 72.2
Medtr1g107135 Medicago truncatula HOM05D003511 ORTHO05D004403 8.9e-60 234.2 164 68.9
vmacro02524 Vaccinium macrocarpon HOM05D003511 ORTHO05D004403 8.9e-60 234.2 166 68.1
VMungo0720G0159 Vigna mungo HOM05D003511 ORTHO05D004403 1.2e-59 233.8 164 69.5
Cc02_g19400 Coffea canephora HOM05D003511 ORTHO05D004403 1.5e-59 233.4 158 71.5
Lsat_1_v5_gn_9_111920 Lactuca sativa HOM05D003511 ORTHO05D004403 2.0e-59 233.0 151 70.2
Nn5g30453 Nelumbo nucifera HOM05D003511 ORTHO05D004403 2.0e-59 233.0 152 73.0
Eucgr.I01093 Eucalyptus grandis HOM05D003511 ORTHO05D004403 3.4e-59 232.3 164 68.3
Cfa004604 Carpinus fangiana HOM05D003511 ORTHO05D004403 4.4e-59 231.9 163 68.1
ClCG05G010350 Citrullus lanatus HOM05D003511 ORTHO05D004403 4.4e-59 231.9 152 71.7
MELO3C019553.2 Cucumis melo HOM05D003511 ORTHO05D004403 5.8e-59 231.5 152 72.4
Sabra09G0072200 Salix brachista HOM05D003511 ORTHO05D004403 7.6e-59 231.1 190 62.1
CsaV3_3G018140 Cucumis sativus L. HOM05D003511 ORTHO05D004403 9.9e-59 230.7 151 72.2
ECA240G1815 Erigeron canadensis HOM05D003511 ORTHO05D004403 9.9e-59 230.7 148 73.6
Ciclev10027838m.g Citrus clementina HOM05D003511 ORTHO05D004403 1.3e-58 230.3 151 67.5
QL11p032687 Quercus lobata HOM05D003511 ORTHO05D004403 1.3e-58 230.3 158 70.3
TWI79G1106 Tripterygium wilfordii HOM05D003511 ORTHO05D004403 1.3e-58 230.3 166 68.1
Gorai.008G022000 Gossypium raimondii HOM05D003511 ORTHO05D004403 1.7e-58 229.9 152 71.1
Lj5C215G13 Lonicera japonica HOM05D003511 ORTHO05D004403 1.7e-58 229.9 155 71.0
RcHm_v2.0_Chr6g0254541 Rosa chinensis HOM05D003511 ORTHO05D004403 1.7e-58 229.9 165 69.1
arahy.Tifrunner.gnm1.ann1.VN0KJM Arachis hypogaea HOM05D003511 ORTHO05D004403 2.2e-58 229.6 151 72.8
Manes.10G075700 Manihot esculenta HOM05D003511 ORTHO05D004403 2.2e-58 229.6 164 66.5
THA.LOC104819550 Tarenaya hassleriana HOM05D003511 ORTHO05D004403 2.2e-58 229.6 151 71.5
Duzib248G0534 Durio zibethinus HOM05D003511 ORTHO05D004403 2.9e-58 229.2 152 71.7
FvH4_2g04870 Fragaria vesca HOM05D003511 ORTHO05D004403 2.9e-58 229.2 165 69.1
FAN24G2294 Fragaria x ananassa HOM05D003511 ORTHO05D004403 2.9e-58 229.2 165 69.1
Sed0017826 Sechium edule HOM05D003511 ORTHO05D004403 4.9e-58 228.4 154 70.8
HanXRQChr09g0251071 Helianthus annuus HOM05D003511 ORTHO05D004403 1.4e-57 226.9 151 70.9
Gohir.D12G021700 Gossypium hirsutum HOM05D003511 ORTHO05D004403 1.9e-57 226.5 151 70.9
TPR.G19061 Trifolium pratense HOM05D003511 ORTHO05D004403 2.4e-57 226.1 165 66.7
AUR62039058 Chenopodium quinoa HOM05D003511 ORTHO05D004403 3.2e-57 225.7 151 70.2
Nitab4.5_0003699g0020 Nicotiana tabacum HOM05D003511 ORTHO05D004403 3.2e-57 225.7 151 71.5
Potri.001G298900 Populus trichocarpa HOM05D003511 ORTHO05D004403 3.2e-57 225.7 163 66.3
Medtr4g127370 Medicago truncatula HOM05D003511 ORTHO05D004403 4.2e-57 225.3 165 66.1
Sp7g32040 Schrenkiella parvula HOM05D003511 ORTHO05D004403 4.2e-57 225.3 151 70.2
ATR0205G005 Amborella trichopoda HOM05D003511 ORTHO05D004403 5.4e-57 224.9 180 62.2
Lsat_1_v5_gn_5_116360 Lactuca sativa HOM05D003511 ORTHO05D004403 5.4e-57 224.9 151 69.5
Sc08g0001330 Simmondsia chinensis HOM05D003511 ORTHO05D004403 5.4e-57 224.9 151 71.5
AL7G17030 Arabidopsis lyrata HOM05D003511 ORTHO05D004403 7.1e-57 224.6 151 70.9
arahy.Tifrunner.gnm1.ann1.LFSR1E Arachis hypogaea HOM05D003511 ORTHO05D004403 7.1e-57 224.6 151 71.5
Lsat_1_v5_gn_5_116340 Lactuca sativa HOM05D003511 ORTHO05D004403 7.1e-57 224.6 151 68.9
Peaxi162Scf00016g02427 Petunia axillaris HOM05D003511 ORTHO05D004403 7.1e-57 224.6 151 71.5
AT4G34260 Arabidopsis thaliana HOM05D003511 ORTHO05D004403 9.3e-57 224.2 151 70.9
AUR62010328 Chenopodium quinoa HOM05D003511 ORTHO05D004403 1.2e-56 223.8 151 72.8
Carub.0007s0611 Capsella rubella HOM05D003511 ORTHO05D004403 2.1e-56 223.0 151 70.2
Nitab4.5_0001480g0130 Nicotiana tabacum HOM05D003511 ORTHO05D004403 2.1e-56 223.0 151 71.5
EL10Ac9g22257 Beta vulgaris HOM05D003511 ORTHO05D004403 2.7e-56 222.6 151 72.8
CARHR242530 Cardamine hirsuta HOM05D003511 ORTHO05D004403 2.7e-56 222.6 151 69.5
CiPaw.05G013200 Carya illinoinensis HOM05D003511 ORTHO05D004403 2.7e-56 222.6 160 66.9
COL.COLO4_32573 Corchorus olitorius HOM05D003511 ORTHO05D004403 2.7e-56 222.6 148 69.6
Thhalv10024398m.g Eutrema salsugineum HOM05D003511 ORTHO05D004403 2.7e-56 222.6 151 70.2
Glyma.01G243600 Glycine max HOM05D003511 ORTHO05D004403 3.5e-56 222.2 167 64.7
Aqoxy6G02835 Aquilegia oxysepala HOM05D003511 ORTHO05D004403 6.0e-56 221.5 166 66.9
PGR142G1515 Punica granatum HOM05D003511 ORTHO05D004403 1.0e-55 220.7 151 72.2
CDE06G2550 Ceratophyllum demersum HOM05D003511 ORTHO05D004403 1.3e-55 220.3 183 62.8
Phvul.002G053000 Phaseolus vulgaris HOM05D003511 ORTHO05D004403 2.3e-55 219.5 166 63.9
BcaNung04164 Brassica carinata HOM05D003511 ORTHO05D004403 3.0e-55 219.2 151 69.5
BcaNung04986 Brassica carinata HOM05D003511 ORTHO05D004403 3.0e-55 219.2 151 68.9
A01p04170 Brassica napus HOM05D003511 ORTHO05D004403 3.0e-55 219.2 151 69.5
AUR62039057 Chenopodium quinoa HOM05D003511 ORTHO05D004403 3.9e-55 218.8 151 71.5
Manes.07G068400 Manihot esculenta HOM05D003511 ORTHO05D004403 3.9e-55 218.8 166 62.7
Potri.009G093500 Populus trichocarpa HOM05D003511 ORTHO05D004403 3.9e-55 218.8 164 64.6
BraA01t00406Z Brassica rapa HOM05D003511 ORTHO05D004403 5.1e-55 218.4 151 68.9
C01p04540 Brassica napus HOM05D003511 ORTHO05D004403 8.7e-55 217.6 151 68.9
BolC1t00439H Brassica oleracea HOM05D003511 ORTHO05D004403 8.7e-55 217.6 151 68.9
MBI16_g16349_MAGBIO Magnolia biondii HOM05D003511 ORTHO05D004403 1.1e-54 217.2 188 60.6
VMungo1215G0806 Vigna mungo HOM05D003511 ORTHO05D004403 1.1e-54 217.2 166 65.7
ATR0661G369 Amborella trichopoda HOM05D003511 ORTHO05D004403 1.5e-54 216.9 180 61.1
Aa31LG2G16810 Aethionema arabicum HOM05D003511 ORTHO05D004403 1.9e-54 216.5 151 67.5
Sabra09G0072100 Salix brachista HOM05D003511 ORTHO05D004403 1.9e-54 216.5 164 63.4
Ah.01g010970 Amaranthus hybridus HOM05D003511 ORTHO05D004403 2.5e-54 216.1 151 67.5
PGR142G0041 Punica granatum HOM05D003511 ORTHO05D004403 2.5e-54 216.1 166 65.1
Hund00157 Selenicereus undatus HOM05D003511 ORTHO05D004403 2.5e-54 216.1 151 68.2
HanXRQChr10g0296941 Helianthus annuus HOM05D003511 ORTHO05D004403 7.3e-54 214.5 151 65.6
MBI16_g33969_MAGBIO Magnolia biondii HOM05D003511 ORTHO05D004403 1.3e-53 213.8 188 59.6
ECA234G0109 Erigeron canadensis HOM05D003511 ORTHO05D004403 2.1e-53 213.0 151 66.2
Eucgr.I01092 Eucalyptus grandis HOM05D003511 ORTHO05D004403 1.5e-51 206.8 167 60.5
SalBow6G6056 Salvia bowleyana HOM05D003511 ORTHO05D004403 3.4e-51 205.7 123 79.7
Hund06308 Selenicereus undatus HOM05D003511 ORTHO05D004403 2.2e-50 203.0 151 64.2
Os10g0339290 Oryza sativa ssp. japonica HOM05D003511 ORTHO05D004403 1.1e-49 200.7 144 64.6
HPP92_006064 Vanilla planifolia HOM05D003511 ORTHO05D004403 1.9e-49 199.9 175 57.1
Zm00001eb027590 Zea mays HOM05D003511 ORTHO05D004403 6.0e-48 194.9 174 57.5
Os10g0339600 Oryza sativa ssp. japonica HOM05D003511 ORTHO05D004403 1.3e-47 193.7 174 56.3
Eucgr.I01091 Eucalyptus grandis HOM05D003511 ORTHO05D004403 3.9e-47 192.2 168 58.3
SMO116G0225 Selaginella moellendorffii HOM05D003511 ORTHO05D004403 6.6e-47 191.4 148 60.8
AUR62010329 Chenopodium quinoa HOM05D003511 ORTHO05D004403 5.8e-43 178.3 122 71.3
Gohir.A12G021350 Gossypium hirsutum HOM05D003511 ORTHO05D004403 1.3e-39 167.2 152 57.2
Cfa004603 Carpinus fangiana HOM05D003511 ORTHO05D004403 2.1e-37 159.8 166 53.0
TWI75G1477 Tripterygium wilfordii HOM05D003511 ORTHO05D004403 4.8e-37 158.7 127 63.0
Rhsim11G0156500 Rhododendron simsii HOM05D003511 ORTHO05D004403 1.1e-36 157.5 167 51.5
Rhsim11G0158000 Rhododendron simsii HOM05D003511 ORTHO05D004403 1.1e-36 157.5 167 51.5
CSS0038772 Camellia sinensis var. sinensis HOM05D003511 ORTHO05D004403 5.3e-36 155.2 118 66.9
FAN20G1862 Fragaria x ananassa HOM05D003511 ORTHO05D004403 4.5e-35 152.1 165 52.7
FAN15G0970 Fragaria x ananassa HOM05D003511 ORTHO05D004403 2.9e-34 149.4 165 52.1
Mapoly0115s0027 Marchantia polymorpha HOM05D003511 ORTHO05D004403 1.4e-33 147.1 141 49.6
Pp3c19_10350 Physcomitrium patens HOM05D003511 ORTHO05D004403 1.3e-29 134.0 191 38.7
Lj5A215G58 Lonicera japonica HOM05D003511 ORTHO05D004403 6.5e-26 121.7 94 64.9
Rhsim10G0162100 Rhododendron simsii HOM05D003511 ORTHO05D004403 4.2e-25 119.0 169 42.0
SEGI_03881 Sequoiadendron giganteum HOM05D003511 ORTHO05D004403 4.2e-25 119.0 125 50.4
Sabra16G0187500 Salix brachista HOM05D003511 ORTHO05D004403 9.7e-14 81.3 49 71.4
SEGI_08298 Sequoiadendron giganteum HOM05D003511 ORTHO05D004403 5.3e-12 75.5 98 46.9
Atru.chr5.2448 Acer truncatum HOM05D003511 ORTHO05D004403 1.4e-09 67.4 35 74.3
Lsat_1_v5_gn_2_5441 Lactuca sativa HOM05D003511 ORTHO05D229135 3.2e-09 66.2 96 42.7


User provided reference genes

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