Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 0.0e+00 1236.5 616 100.0
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 3.4e-304 1047.7 616 83.4
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 3.4e-304 1047.7 616 83.4
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 4.9e-303 1043.9 568 87.7
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 1.2e-301 1039.3 587 86.7
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 6.2e-298 1026.9 590 84.4
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 2.2e-295 1018.5 610 81.0
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 6.5e-295 1016.9 594 83.2
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 1.4e-294 1015.8 575 84.9
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 2.5e-294 1015.0 621 79.2
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 4.2e-294 1014.2 618 79.6
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 1.2e-293 1012.7 568 84.9
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 2.7e-293 1011.5 569 84.2
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 6.0e-293 1010.4 615 80.2
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 2.3e-292 1008.4 617 80.7
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 3.9e-292 1007.7 620 80.5
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 8.7e-292 1006.5 618 79.0
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 1.9e-291 1005.4 597 82.2
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 2.1e-290 1001.9 619 79.2
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 1.4e-289 999.2 570 83.2
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 3.4e-288 994.6 569 83.0
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 3.4e-288 994.6 638 76.3
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 3.8e-287 991.1 597 78.7
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 5.0e-287 990.7 620 77.9
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 6.5e-287 990.3 616 79.4
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.1e-286 989.6 595 80.2
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 1.1e-286 989.6 608 78.6
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 3.2e-286 988.0 600 81.2
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 7.1e-286 986.9 638 76.8
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 1.2e-285 986.1 619 78.4
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 6.1e-285 983.8 569 81.7
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 1.3e-284 982.6 569 81.5
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 6.7e-284 980.3 618 77.5
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 1.5e-283 979.2 584 79.3
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 3.3e-283 978.0 722 69.9
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 4.3e-283 977.6 612 76.5
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 1.6e-282 975.7 568 82.2
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 8.2e-282 973.4 569 81.7
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 1.8e-281 972.2 569 81.4
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 1.8e-281 972.2 680 72.5
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 2.4e-281 971.8 650 73.7
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 2.4e-281 971.8 569 81.2
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 3.1e-281 971.5 569 81.4
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 1.7e-279 965.7 569 80.7
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 5.0e-279 964.1 581 80.4
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 6.5e-279 963.8 568 81.7
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 6.5e-279 963.8 578 80.3
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 8.5e-279 963.4 581 80.2
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 1.9e-278 962.2 581 80.2
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 1.9e-278 962.2 617 76.8
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 5.5e-278 960.7 597 78.9
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 9.4e-278 959.9 581 80.0
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 2.7e-277 958.4 623 75.3
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 4.6e-277 957.6 583 80.4
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 1.4e-276 956.1 624 75.6
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 1.8e-276 955.7 607 76.3
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 6.7e-276 953.7 625 75.7
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 8.8e-276 953.4 569 81.7
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 9.7e-275 949.9 566 80.6
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 1.8e-273 945.7 569 78.2
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 1.8e-273 945.7 594 77.3
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 6.9e-273 943.7 570 78.2
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 6.9e-273 943.7 569 80.0
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 5.9e-272 940.6 570 80.0
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 1.0e-271 939.9 683 67.2
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 1.5e-267 926.0 535 83.0
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 5.7e-267 924.1 569 78.6
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.2e-266 922.2 623 74.6
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 3.7e-266 921.4 582 75.9
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 8.2e-266 920.2 587 75.8
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 1.4e-265 919.5 569 77.7
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 2.4e-265 918.7 585 76.8
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 3.1e-265 918.3 591 74.5
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 5.3e-265 917.5 569 78.0
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 1.5e-264 916.0 528 82.8
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 7.7e-264 913.7 568 78.3
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 1.9e-262 909.1 625 73.6
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 4.7e-261 904.4 569 76.6
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 1.4e-260 902.9 567 75.7
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 1.8e-260 902.5 569 76.3
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 6.3e-258 894.0 572 77.1
Atru.chr7.723 Acer truncatum HOM05D000306 ORTHO05D007657 1.2e-251 873.2 536 80.2
TAR383G0632 Trochodendron aralioides HOM05D000306 ORTHO05D007657 8.3e-250 867.1 509 81.7
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 1.4e-249 866.3 626 68.8
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 6.5e-247 857.4 532 77.3
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 1.5e-246 856.3 543 75.1
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 3.6e-237 825.1 462 84.6
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 1.7e-234 816.2 575 66.4
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 2.9e-234 815.5 571 67.6
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 8.0e-229 797.3 462 81.4
SGA_v2.0_scaffold69G23280 Striga asiatica HOM05D000306 ORTHO05D007657 1.3e-226 790.0 477 80.9
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 2.7e-224 782.3 487 77.0
Psat4g012000 Pisum sativum HOM05D000306 ORTHO05D007657 4.1e-217 758.4 462 79.0
Lj9A688T83 Lonicera japonica HOM05D000306 ORTHO05D007657 4.7e-213 745.0 465 77.6
DCAR_020115 Daucus carota HOM05D000306 ORTHO05D007657 8.1e-213 744.2 440 79.8
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 1.3e-199 700.3 602 63.3
CARHR238220 Cardamine hirsuta HOM05D000306 ORTHO05D007657 4.6e-192 675.2 399 79.9
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 1.3e-191 673.7 616 57.5
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 2.8e-189 666.0 532 61.3
Os02g0177900 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D007657 7.9e-160 568.2 351 78.9
RcHm_v2.0_Chr4g0405011 Rosa chinensis HOM05D000306 ORTHO05D007657 1.0e-159 567.8 358 76.3
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 2.4e-156 556.6 457 61.1
MELO3C004085.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.6e-152 543.9 597 50.4
Nn8g40502 Nelumbo nucifera HOM05D000306 ORTHO05D007657 1.7e-146 523.9 318 78.9
SEGI_13713 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 3.6e-136 489.6 310 71.3
Aqoxy3G01085 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 9.8e-126 454.9 267 80.5
Haze_26997 Corylus avellana HOM05D000306 ORTHO05D007657 7.7e-123 445.3 561 43.5
Nn2g14416 Nelumbo nucifera HOM05D000306 ORTHO05D007657 1.1e-121 441.4 247 83.8
CSS0008880 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 2.5e-113 413.7 240 83.3
SHI02941 Sapria himalayana HOM05D000306 ORTHO05D007657 4.7e-112 409.5 265 75.1
Cfa026537 Carpinus fangiana HOM05D000306 ORTHO05D007657 3.9e-98 363.2 589 36.2
Aqoxy1G02891 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.4e-84 317.4 210 73.3
Aqoxy3G01524 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.5e-81 307.4 175 82.9
Lj9A687T77 Lonicera japonica HOM05D000306 ORTHO05D007657 6.7e-66 256.1 193 71.0
Aqoxy1G03516 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 3.5e-59 233.8 187 65.2
MELO3C000682.2 Cucumis melo HOM05D000306 ORTHO05D007657 8.2e-56 222.6 121 85.1
HanXRQChr09g0255811 Helianthus annuus HOM05D000306 ORTHO05D007657 1.0e-53 215.7 125 80.0
SEGI_25583 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 2.7e-51 207.6 134 70.9
arahy.Tifrunner.gnm1.ann1.ID2I7H Arachis hypogaea HOM05D000306 ORTHO05D007657 8.2e-48 196.1 128 75.0
Cre12.g543902 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D007657 1.4e-44 185.3 526 29.5
MCO11G321 Micromonas commoda HOM05D002248 ORTHO05D006121 1.7e-40 171.8 557 26.8
Aqoxy3G01525 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.1e-39 169.1 88 86.4
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 1.2e-38 165.6 611 27.3
MELO3C028573.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.3e-32 145.6 104 63.5
QL02p086401 Quercus lobata HOM05D000306 ORTHO05D007657 8.0e-27 126.3 77 80.5
QL02p097096 Quercus lobata HOM05D000306 ORTHO05D007657 9.7e-25 119.4 77 76.6
arahy.Tifrunner.gnm1.ann1.MK7H36 Arachis hypogaea HOM05D000306 ORTHO05D007657 1.3e-24 119.0 64 81.2
DCAR_020114 Daucus carota HOM05D000306 ORTHO05D007657 4.1e-23 114.0 70 77.1
SEGI_34135 Sequoiadendron giganteum HOM05D000306 ORTHO05D030075 1.6e-22 112.1 69 76.8
CAN.G790.37 Capsicum annuum HOM05D000306 ORTHO05D007657 3.2e-20 104.4 55 85.5
QL02p097130 Quercus lobata HOM05D000306 ORTHO05D007657 4.7e-19 100.5 66 77.3
Pp3s42_220 Physcomitrium patens HOM05D003206 ORTHO05D310700 5.4e-15 87.0 547 22.3
RcHm_v2.0_Chr4g0405021 Rosa chinensis HOM05D000306 ORTHO05D030075 9.1e-15 86.3 59 71.2
MD07G1169000 Malus domestica HOM05D000306 ORTHO05D030075 9.5e-12 76.3 60 68.3
arahy.Tifrunner.gnm1.ann1.QZT5UT Arachis hypogaea HOM05D000200 ORTHO05D010534 6.1e-11 73.6 50 72.0
TPR.G18960 Trifolium pratense HOM05D000306 ORTHO05D007657 1.4e-10 72.4 43 81.4
TPR.G20440 Trifolium pratense HOM05D000306 ORTHO05D050985 1.2e-09 69.3 41 78.0
Haze_26767 Corylus avellana HOM05D003206 ORTHO05D005207 7.5e-09 66.6 221 27.1
SEGI_29302 Sequoiadendron giganteum HOM05D000306 ORTHO05D050985 7.5e-09 66.6 41 75.6
QL02p097186 Quercus lobata HOM05D000306 ORTHO05D030075 7.8e-06 56.6 41 65.9


User provided reference genes

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