Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 3.0e-44 181.4 90 100.0
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 1.3e-31 139.4 81 80.2
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 1.6e-29 132.5 77 77.9
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 4.7e-29 131.0 83 75.9
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 8.9e-28 126.7 78 71.8
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 2.0e-27 125.6 85 68.2
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 2.9e-26 121.7 74 74.3
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 2.9e-26 121.7 73 74.0
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 4.9e-26 120.9 73 74.0
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 8.3e-26 120.2 73 76.7
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 1.9e-25 119.0 70 75.7
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 5.4e-25 117.5 74 71.6
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 5.4e-25 117.5 73 74.0
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 7.1e-25 117.1 73 72.6
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 7.1e-25 117.1 61 83.6
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 9.2e-25 116.7 77 70.1
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 1.2e-24 116.3 76 68.4
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 2.1e-24 115.5 67 77.6
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 3.5e-24 114.8 72 72.2
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 4.6e-24 114.4 62 79.0
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 6.0e-24 114.0 68 72.1
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 6.0e-24 114.0 70 70.0
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 2.3e-23 112.1 71 69.0
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.1e-22 109.8 68 70.6
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 1.1e-22 109.8 66 72.7
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 1.1e-22 109.8 73 64.4
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 1.9e-22 109.0 73 69.9
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 1.9e-22 109.0 74 66.2
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 1.9e-22 109.0 73 65.8
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 2.5e-22 108.6 75 68.0
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 2.5e-22 108.6 68 70.6
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 3.3e-22 108.2 68 70.6
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 3.3e-22 108.2 70 68.6
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 4.3e-22 107.8 71 70.4
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 5.6e-22 107.5 74 60.8
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 5.6e-22 107.5 74 66.2
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 5.6e-22 107.5 74 66.2
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 5.6e-22 107.5 74 66.2
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 5.6e-22 107.5 64 73.4
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 5.6e-22 107.5 73 65.8
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 5.6e-22 107.5 70 68.6
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 7.3e-22 107.1 68 69.1
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 7.3e-22 107.1 74 66.2
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 1.2e-21 106.3 75 65.3
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 1.2e-21 106.3 74 66.2
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 1.2e-21 106.3 68 67.6
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 1.6e-21 105.9 74 64.9
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 1.6e-21 105.9 74 62.2
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 1.6e-21 105.9 60 75.0
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 2.1e-21 105.5 66 71.2
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 2.8e-21 105.1 71 64.8
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 3.6e-21 104.8 67 67.2
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 3.6e-21 104.8 73 64.4
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 4.7e-21 104.4 70 65.7
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 4.7e-21 104.4 68 67.6
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 4.7e-21 104.4 79 64.6
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 6.2e-21 104.0 74 62.2
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 6.2e-21 104.0 77 63.6
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 8.1e-21 103.6 68 64.7
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 8.1e-21 103.6 68 66.2
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 1.1e-20 103.2 68 69.1
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 2.4e-20 102.1 68 63.2
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 2.4e-20 102.1 88 61.4
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 3.1e-20 101.7 70 65.7
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.1e-20 101.7 74 63.5
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.1e-20 101.7 74 63.5
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 4.0e-20 101.3 68 67.6
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 5.2e-20 100.9 72 65.3
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 5.2e-20 100.9 64 70.3
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 5.2e-20 100.9 70 64.3
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 6.8e-20 100.5 68 64.7
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 8.9e-20 100.1 60 70.0
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 8.9e-20 100.1 65 69.2
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 8.9e-20 100.1 61 70.5
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 8.9e-20 100.1 74 62.2
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 8.9e-20 100.1 74 62.2
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 8.9e-20 100.1 67 65.7
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 1.5e-19 99.4 62 69.4
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 2.0e-19 99.0 64 70.3
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 2.0e-19 99.0 61 73.8
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 2.2e-18 95.5 62 66.1
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 4.9e-18 94.4 64 67.2
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 6.4e-18 94.0 63 66.7
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 3.2e-17 91.7 77 53.2
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 2.3e-15 85.5 77 51.9
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 3.9e-15 84.7 71 53.5
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 4.7e-13 77.8 60 61.7
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 4.7e-13 77.8 50 66.0
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 8.1e-13 77.0 60 55.0
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 2.4e-12 75.5 57 57.9
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 1.2e-08 63.2 43 65.1
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 3.5e-08 61.6 43 67.4
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 1.0e-07 60.1 35 71.4
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 2.3e-07 58.9 38 65.8
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 4.3e-06 54.7 65 44.6
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 7.3e-06 53.9 30 70.0
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 7.3e-06 53.9 30 70.0
Psat2g101840 Pisum sativum HOM05D006863 ORTHO05D044797 7.3e-06 53.9 36 69.4


User provided reference genes

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