Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 1.2e-197 693.0 349 100.0
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 2.6e-144 515.8 352 79.0
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 7.6e-75 285.0 389 49.4
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 1.8e-71 273.9 394 49.0
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 1.3e-63 247.7 362 47.8
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 3.0e-63 246.5 374 43.6
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 6.9e-60 235.3 369 42.0
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 2.6e-59 233.4 372 43.5
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 2.2e-58 230.3 384 43.8
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 1.9e-57 227.3 374 43.9
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 2.5e-57 226.9 380 40.3
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 2.5e-57 226.9 367 43.6
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.6e-56 224.2 370 43.8
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 2.1e-56 223.8 378 42.6
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 2.7e-56 223.4 378 42.6
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 4.6e-56 222.6 500 36.0
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 1.8e-55 220.7 374 41.7
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 5.1e-55 219.2 373 42.6
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 1.1e-54 218.0 358 42.7
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 1.5e-54 217.6 374 42.2
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.9e-54 217.2 374 43.0
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 2.5e-54 216.9 359 42.9
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 5.9e-51 205.7 355 42.5
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 7.6e-51 205.3 368 41.0
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 7.6e-51 205.3 365 41.1
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 8.5e-50 201.8 376 42.6
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 2.1e-48 197.2 419 37.2
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 2.3e-47 193.7 333 42.0
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 3.9e-47 193.0 294 47.3
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 5.1e-47 192.6 384 37.8
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 1.5e-46 191.0 413 37.5
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 2.0e-43 180.6 416 35.1
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.0e-42 178.3 499 31.7
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 5.5e-41 172.6 484 33.1
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 9.4e-41 171.8 372 36.3
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 2.7e-40 170.2 366 36.1
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 3.6e-40 169.9 412 35.7
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 7.9e-40 168.7 305 41.0
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 1.4e-39 167.9 356 36.5
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 8.8e-39 165.2 377 37.4
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.3e-37 161.4 421 33.5
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 6.3e-37 159.1 407 34.2
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 5.3e-36 156.0 260 40.4
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 7.7e-35 152.1 422 31.0
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 2.2e-34 150.6 401 34.4
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 1.1e-33 148.3 425 34.1
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 1.4e-33 147.9 345 33.0
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 4.2e-33 146.4 376 34.6
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 4.2e-33 146.4 331 35.0
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 2.7e-32 143.7 267 39.3
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 4.7e-32 142.9 391 34.5
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 2.3e-31 140.6 324 34.6
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 6.7e-31 139.0 425 29.2
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 6.7e-31 139.0 320 31.9
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 7.4e-30 135.6 245 41.2
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 4.8e-29 132.9 265 40.4
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 6.3e-29 132.5 247 43.3
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 1.6e-27 127.9 376 32.2
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 5.9e-27 125.9 387 30.5
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 2.9e-26 123.6 334 33.8
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 5.0e-26 122.9 340 33.5
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 5.0e-26 122.9 353 32.0
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 2.5e-25 120.6 453 28.0
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 7.2e-25 119.0 455 26.2
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 4.0e-23 113.2 159 44.7
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 1.7e-21 107.8 348 30.2
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 1.8e-20 104.4 172 42.4
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 2.4e-20 104.0 378 29.9
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 3.5e-19 100.1 193 40.9
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 2.9e-18 97.1 194 38.7
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 1.1e-17 95.1 247 33.2
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 2.7e-16 90.5 198 34.8
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 1.8e-15 87.8 250 30.0
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 1.8e-15 87.8 69 59.4
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 4.0e-15 86.7 336 29.8
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 2.0e-14 84.3 370 27.6
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 7.5e-14 82.4 159 39.6
unitig_744.g24157 Utricularia gibba HOM05D007667 ORTHO05D008033 4.8e-13 79.7 191 36.1
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 1.4e-12 78.2 374 28.1
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 2.4e-12 77.4 155 39.4
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 3.1e-12 77.0 316 27.5
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 7.0e-12 75.9 211 28.9
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 1.7e-10 71.2 196 31.1
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 3.8e-10 70.1 231 27.3
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 5.0e-10 69.7 248 27.0
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 5.0e-10 69.7 242 26.9
Ah.04g150340 Amaranthus hybridus HOM05D003123 ORTHO05D003492 8.6e-10 68.9 145 36.6
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 8.6e-10 68.9 82 51.2
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 8.6e-10 68.9 93 46.2
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 1.5e-09 68.2 237 26.6
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 1.9e-09 67.8 148 37.2
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 3.3e-09 67.0 92 45.7
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 3.3e-09 67.0 205 27.3
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 9.5e-09 65.5 82 48.8
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 1.6e-08 64.7 148 34.5
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 2.1e-08 64.3 394 23.4
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 2.1e-08 64.3 229 28.8
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 2.8e-08 63.9 236 25.4
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 3.6e-08 63.5 242 28.1
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 3.6e-08 63.5 91 39.6
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 4.7e-08 63.2 239 25.1
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea HOM05D007667 ORTHO05D008033 6.1e-08 62.8 124 38.7
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 6.1e-08 62.8 244 25.8
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 6.1e-08 62.8 116 33.6
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 6.1e-08 62.8 232 27.2
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 8.0e-08 62.4 280 25.7
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 8.0e-08 62.4 239 25.5
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 1.0e-07 62.0 253 27.3
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 1.0e-07 62.0 253 27.3
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 4.0e-07 60.1 179 27.9
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 4.0e-07 60.1 179 27.9
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 5.2e-07 59.7 342 24.6
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 5.2e-07 59.7 342 24.6
HPP92_014340 Vanilla planifolia HOM05D007667 ORTHO05D008033 5.2e-07 59.7 192 29.7
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 8.9e-07 58.9 197 27.4
CDE04G0047 Ceratophyllum demersum HOM05D007667 ORTHO05D008033 8.9e-07 58.9 405 25.4
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 2.6e-06 57.4 76 36.8
MBI13_g08647_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 5.7e-06 56.2 124 35.5


User provided reference genes

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