Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041981.1 Olea europaea HOM05D004062 ORTHO05D004417 2.6e-68 261.9 132 100.0
Oeu030797.1 Olea europaea HOM05D004062 ORTHO05D004417 1.4e-50 203.0 130 80.8
Oeu030798.1 Olea europaea HOM05D004062 ORTHO05D004417 1.4e-50 203.0 130 80.8
Oeu012583.1 Olea europaea HOM05D004062 ORTHO05D004417 1.4e-26 123.2 137 51.8
SalBow5G1592 Salvia bowleyana HOM05D004062 ORTHO05D004417 2.1e-25 119.4 133 51.1
MSTRG.23597 Avicennia marina HOM05D004062 ORTHO05D004417 7.9e-25 117.5 134 53.0
Migut.H00242 Erythranthe guttata HOM05D004062 ORTHO05D004417 1.4e-24 116.7 126 53.2
SGA_v2.0_scaffold202G41473 Striga asiatica HOM05D004062 ORTHO05D004417 1.4e-24 116.7 115 53.0
Cc07_g08490 Coffea canephora HOM05D004062 ORTHO05D004417 3.9e-24 115.2 136 49.3
SalBow3G0055 Salvia bowleyana HOM05D004062 ORTHO05D004417 3.3e-23 112.1 98 58.2
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 9.7e-23 110.5 138 49.3
PGSC0003DMG400016976 Solanum tuberosum HOM05D004062 ORTHO05D004417 4.1e-21 105.1 130 49.2
PGSC0003DMG400030667 Solanum tuberosum HOM05D004062 ORTHO05D004417 4.1e-21 105.1 130 49.2
Thecc.04G128000 Theobroma cacao HOM05D004062 ORTHO05D004417 1.5e-20 103.2 136 47.1
Oeu047438.1 Olea europaea HOM05D004062 ORTHO05D004417 2.6e-20 102.4 121 52.1
Migut.L00492 Erythranthe guttata HOM05D004062 ORTHO05D004417 7.7e-20 100.9 137 46.0
Haze_14190 Corylus avellana HOM05D004062 ORTHO05D004417 3.8e-19 98.6 135 47.4
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 1.1e-18 97.1 101 58.4
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 1.1e-18 97.1 138 45.7
COL.COLO4_09380 Corchorus olitorius HOM05D004062 ORTHO05D004417 1.4e-18 96.7 138 46.4
CiPaw.04G044300 Carya illinoinensis HOM05D004062 ORTHO05D004417 3.2e-18 95.5 137 46.0
DCAR_010707 Daucus carota HOM05D004062 ORTHO05D004417 5.5e-18 94.7 136 45.6
DCAR_010711 Daucus carota HOM05D004062 ORTHO05D004417 1.6e-17 93.2 139 44.6
Glyma.18G293600 Glycine max HOM05D004062 ORTHO05D004417 2.7e-17 92.4 135 45.9
Glyma.02G089400 Glycine max HOM05D004062 ORTHO05D004417 3.6e-17 92.0 133 46.6
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 3.6e-17 92.0 134 43.3
Potri.004G095150 Populus trichocarpa HOM05D004062 ORTHO05D004417 4.7e-17 91.7 136 42.6
Potri.004G095200 Populus trichocarpa HOM05D004062 ORTHO05D004417 4.7e-17 91.7 136 42.6
CiPaw.03G065300 Carya illinoinensis HOM05D004062 ORTHO05D004417 6.1e-17 91.3 139 42.4
DCAR_010706 Daucus carota HOM05D004062 ORTHO05D004417 8.0e-17 90.9 119 43.7
Gohir.A11G166400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 8.0e-17 90.9 135 43.7
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 1.4e-16 90.1 98 51.0
DCAR_010710 Daucus carota HOM05D004062 ORTHO05D004417 1.8e-16 89.7 140 42.9
Gohir.D11G172800 Gossypium hirsutum HOM05D004062 ORTHO05D004417 1.8e-16 89.7 133 44.4
Medtr7g082730 Medicago truncatula HOM05D004062 ORTHO05D004417 1.8e-16 89.7 91 51.6
Potri.017G119800 Populus trichocarpa HOM05D004062 ORTHO05D004417 1.8e-16 89.7 138 44.2
Gohir.D11G172400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 3.0e-16 89.0 133 44.4
Gorai.007G185100 Gossypium raimondii HOM05D004062 ORTHO05D004417 3.0e-16 89.0 133 44.4
Sabra17G0098800 Salix brachista HOM05D004062 ORTHO05D004417 3.9e-16 88.6 134 44.0
Aqoxy3G03995 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 5.2e-16 88.2 139 42.4
DCAR_010708 Daucus carota HOM05D004062 ORTHO05D004417 5.2e-16 88.2 137 43.1
Sabra04G0064400 Salix brachista HOM05D004062 ORTHO05D004417 5.2e-16 88.2 136 43.4
DCAR_010713 Daucus carota HOM05D004062 ORTHO05D004417 8.8e-16 87.4 99 49.5
Lsat_1_v5_gn_3_82781 Lactuca sativa HOM05D004062 ORTHO05D004417 8.8e-16 87.4 132 40.9
Duzib138G0221 Durio zibethinus HOM05D004062 ORTHO05D004417 1.5e-15 86.7 113 48.7
Medtr7g082700 Medicago truncatula HOM05D004062 ORTHO05D004417 2.0e-15 86.3 129 45.0
Medtr7g082740 Medicago truncatula HOM05D004062 ORTHO05D004417 2.6e-15 85.9 126 43.7
arahy.Tifrunner.gnm1.ann1.95RUG0 Arachis hypogaea HOM05D004062 ORTHO05D004417 3.3e-15 85.5 100 49.0
arahy.Tifrunner.gnm1.ann1.EB5M6E Arachis hypogaea HOM05D004062 ORTHO05D004417 3.3e-15 85.5 100 49.0
PGR004G1762 Punica granatum HOM05D004062 ORTHO05D004417 7.4e-15 84.3 129 45.0
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.7e-14 83.2 134 39.6
arahy.Tifrunner.gnm1.ann1.56V7KA Arachis hypogaea HOM05D004062 ORTHO05D004417 8.2e-14 80.9 94 48.9
arahy.Tifrunner.gnm1.ann1.RE711V Arachis hypogaea HOM05D004062 ORTHO05D004417 8.2e-14 80.9 94 48.9
Hma1.2p1_0500F.1_g167200 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 1.1e-13 80.5 120 46.7
Ca_08095_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 1.8e-13 79.7 93 48.4
Manes.01G113100 Manihot esculenta HOM05D004062 ORTHO05D004417 2.4e-13 79.3 127 44.1
DCAR_010712 Daucus carota HOM05D004062 ORTHO05D004417 4.1e-13 78.6 135 41.5
CiPaw.05G243300 Carya illinoinensis HOM05D004062 ORTHO05D004417 5.3e-13 78.2 113 38.9
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 7.0e-13 77.8 135 39.3
Eucgr.F02795 Eucalyptus grandis HOM05D004062 ORTHO05D004417 7.0e-13 77.8 139 38.8
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 7.0e-13 77.8 135 38.5
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 1.2e-12 77.0 135 39.3
Manes.02G072000 Manihot esculenta HOM05D004062 ORTHO05D004417 1.2e-12 77.0 136 39.7
Ca_08096_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 1.6e-12 76.6 97 49.5
DCAR_010709 Daucus carota HOM05D004062 ORTHO05D004417 1.6e-12 76.6 134 39.6
VMungo1383G0607 Vigna mungo HOM05D004062 ORTHO05D004417 1.6e-12 76.6 88 45.5
TPR.G16561 Trifolium pratense HOM05D004062 ORTHO05D004417 5.9e-12 74.7 95 47.4
Lalb_Chr17g0335981 Lupinus albus HOM05D004062 ORTHO05D004417 7.7e-12 74.3 128 39.1
TPR.G16550 Trifolium pratense HOM05D004062 ORTHO05D004417 7.7e-12 74.3 123 43.1
Aqoxy3G03996 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.0e-11 73.9 130 40.8
Psat3g097360 Pisum sativum HOM05D004062 ORTHO05D004417 1.0e-11 73.9 120 42.5
MBI16_g14296_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.3e-11 73.6 124 38.7
Lj1g0027246 Lotus japonicus HOM05D004062 ORTHO05D004417 1.7e-11 73.2 135 41.5
Lj1g0013725 Lotus japonicus HOM05D004062 ORTHO05D004417 2.2e-11 72.8 131 41.2
Phvul.008G008700 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 2.2e-11 72.8 90 44.4
Psat3g097320 Pisum sativum HOM05D004062 ORTHO05D004417 3.8e-11 72.0 113 42.5
TAR622G1405 Trochodendron aralioides HOM05D004062 ORTHO05D004417 5.0e-11 71.6 131 36.6
Aqoxy3G03994 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.9e-10 69.7 110 39.1
MBI16_g14298_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 2.5e-10 69.3 129 33.3
Glyma.02G089500 Glycine max HOM05D004062 ORTHO05D004417 3.2e-10 68.9 138 37.0
Lj1g0017758 Lotus japonicus HOM05D004062 ORTHO05D004417 3.2e-10 68.9 141 36.9
MBI10_g08537_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 3.2e-10 68.9 101 41.6
Ciclev10013071m.g Citrus clementina HOM05D004062 ORTHO05D004417 4.2e-10 68.6 131 41.2
Glyma.18G293500 Glycine max HOM05D004062 ORTHO05D004417 7.2e-10 67.8 136 36.8
MBI16_g14297_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 7.2e-10 67.8 128 32.8
Phvul.008G008800 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 7.2e-10 67.8 135 37.0
Ciclev10013069m.g Citrus clementina HOM05D004062 ORTHO05D004417 9.4e-10 67.4 132 41.7
RcHm_v2.0_Chr4g0434311 Rosa chinensis HOM05D004062 ORTHO05D004417 9.4e-10 67.4 141 36.9
CANSAT78G1768 Cannabis sativa HOM05D004062 ORTHO05D004417 2.1e-09 66.2 133 39.1
FAN07G0543 Fragaria x ananassa HOM05D004062 ORTHO05D004417 2.7e-09 65.9 142 35.2
Rhsim09G0103200 Rhododendron simsii HOM05D004062 ORTHO05D004417 2.7e-09 65.9 128 33.6
FAN17G2092 Fragaria x ananassa HOM05D004062 ORTHO05D004417 3.6e-09 65.5 142 35.2
FvH4_4g26630 Fragaria vesca HOM05D004062 ORTHO05D004417 4.7e-09 65.1 142 35.2
FAN12G0456 Fragaria x ananassa HOM05D004062 ORTHO05D004417 4.7e-09 65.1 142 35.2
FAN12G4350 Fragaria x ananassa HOM05D004062 ORTHO05D004417 4.7e-09 65.1 142 35.2
Lalb_Chr04g0257671 Lupinus albus HOM05D004062 ORTHO05D004417 4.7e-09 65.1 131 34.4
Rhsim09G0103100 Rhododendron simsii HOM05D004062 ORTHO05D004417 4.7e-09 65.1 93 35.5
VMungo1383G2158 Vigna mungo HOM05D004062 ORTHO05D004417 4.7e-09 65.1 135 37.0
Ca_08097_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 6.1e-09 64.7 114 37.7
Psat3g097240 Pisum sativum HOM05D004062 ORTHO05D004417 6.1e-09 64.7 88 40.9
Rhsim08G0083900 Rhododendron simsii HOM05D004062 ORTHO05D004417 6.1e-09 64.7 96 43.8
FAN22G1760 Fragaria x ananassa HOM05D004062 ORTHO05D004417 8.0e-09 64.3 142 34.5
TPR.G16541 Trifolium pratense HOM05D004062 ORTHO05D004417 8.0e-09 64.3 102 38.2
Aqoxy3G03997 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.0e-08 63.9 98 39.8
Sabra10G0089600 Salix brachista HOM05D004062 ORTHO05D004417 1.0e-08 63.9 135 35.6
CiPaw.05G243400 Carya illinoinensis HOM05D004062 ORTHO05D004417 1.4e-08 63.5 132 32.6
EL10Ac2g04523 Beta vulgaris HOM05D004062 ORTHO05D004417 1.8e-08 63.2 94 44.7
Ah.16g101490 Amaranthus hybridus HOM05D004062 ORTHO05D004417 2.3e-08 62.8 102 42.2
Rhsim10G0073300 Rhododendron simsii HOM05D004062 ORTHO05D004417 3.0e-08 62.4 136 32.4
Potri.010G119200 Populus trichocarpa HOM05D004062 ORTHO05D004417 4.0e-08 62.0 117 35.9
CDE10G0393 Ceratophyllum demersum HOM05D004062 ORTHO05D004417 6.7e-08 61.2 99 37.4
Ciclev10018255m.g Citrus clementina HOM05D004062 ORTHO05D004417 6.7e-08 61.2 119 37.0
Medtr7g082760 Medicago truncatula HOM05D004062 ORTHO05D004417 1.5e-07 60.1 88 38.6
Ciclev10018020m.g Citrus clementina HOM05D004062 ORTHO05D004417 2.6e-07 59.3 118 34.7
Actinidia15903 Actinidia chinensis HOM05D002710 ORTHO05D002905 3.3e-07 58.9 144 34.7
Dinv31584 Davidia involucrata HOM05D004062 ORTHO05D004417 3.3e-07 58.9 103 35.9
MBI18_g04358_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 4.4e-07 58.5 129 31.0
Os05g0576600 Oryza sativa ssp. japonica HOM05D025274 ORTHO05D026015 5.7e-07 58.2 128 32.8
Psat3g097280 Pisum sativum HOM05D004062 ORTHO05D004417 5.7e-07 58.2 86 36.0
Atru.chr1.1607 Acer truncatum HOM05D004062 ORTHO05D004417 9.7e-07 57.4 97 42.3
Medtr7g082750 Medicago truncatula HOM05D004062 ORTHO05D004417 9.7e-07 57.4 86 38.4
Ciclev10013668m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.3e-06 57.0 86 47.7
Prupe.1G317600 Prunus persica HOM05D004062 ORTHO05D004417 1.3e-06 57.0 114 38.6
MELO3C005337.2 Cucumis melo HOM05D004062 ORTHO05D004417 2.2e-06 56.2 139 36.0
Thecc.02G220400 Theobroma cacao HOM05D004062 ORTHO05D004417 2.2e-06 56.2 90 35.6
Zm00001eb296670 Zea mays HOM05D025274 ORTHO05D026015 2.2e-06 56.2 110 31.8
Cpa.g.sc314.3 Carica papaya HOM05D004062 ORTHO05D004417 2.8e-06 55.8 119 37.0
Prupe.1G317700 Prunus persica HOM05D004062 ORTHO05D004417 2.8e-06 55.8 138 34.1
AUR62023219 Chenopodium quinoa HOM05D004062 ORTHO05D004417 6.3e-06 54.7 151 35.8
AUR62044612 Chenopodium quinoa HOM05D004062 ORTHO05D004417 6.3e-06 54.7 151 35.8
RcHm_v2.0_Chr4g0434241 Rosa chinensis HOM05D004062 ORTHO05D004417 6.3e-06 54.7 143 35.0
ClCG01G005940 Citrullus lanatus HOM05D004062 ORTHO05D004417 8.2e-06 54.3 138 35.5


User provided reference genes

Program Settings