Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041963.1 Olea europaea HOM05D007783 ORTHO05D009740 4.9e-44 181.4 145 100.0
Oeu011075.1 Olea europaea HOM05D007783 ORTHO05D009740 2.0e-29 132.9 146 74.7
TWI36G1428 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 2.5e-16 89.4 71 66.2
FvH4_6g43650 Fragaria vesca HOM05D007783 ORTHO05D009740 3.3e-16 89.0 73 64.4
FAN14G2245 Fragaria x ananassa HOM05D007783 ORTHO05D009740 1.6e-15 86.7 73 63.0
MSTRG.12290 Avicennia marina HOM05D007783 ORTHO05D009740 2.2e-15 86.3 79 63.3
FAN05G3706 Fragaria x ananassa HOM05D007783 ORTHO05D009740 2.2e-15 86.3 73 63.0
CANSAT64G1524 Cannabis sativa HOM05D007783 ORTHO05D009740 6.3e-15 84.7 74 62.2
RcHm_v2.0_Chr2g0160271 Rosa chinensis HOM05D007783 ORTHO05D009740 1.4e-14 83.6 68 61.8
FAN09G3630 Fragaria x ananassa HOM05D007783 ORTHO05D009740 1.8e-14 83.2 59 67.8
Solyc07g052680.1 Solanum lycopersicum HOM05D007783 ORTHO05D009740 1.8e-14 83.2 76 61.8
PGSC0003DMG400026167 Solanum tuberosum HOM05D007783 ORTHO05D009740 1.8e-14 83.2 76 61.8
Cfa014450 Carpinus fangiana HOM05D007783 ORTHO05D009740 5.3e-14 81.6 73 63.0
Lsat_1_v5_gn_8_129821 Lactuca sativa HOM05D007783 ORTHO05D009740 5.3e-14 81.6 78 56.4
Migut.H01214 Erythranthe guttata HOM05D007783 ORTHO05D009740 1.2e-13 80.5 72 59.7
Dinv10909 Davidia involucrata HOM05D007783 ORTHO05D009740 1.5e-13 80.1 58 74.1
TWI18G0657 Tripterygium wilfordii HOM05D007783 ORTHO05D009740 1.5e-13 80.1 60 65.0
Rhsim06G0156700 Rhododendron simsii HOM05D000213 ORTHO05D009740 2.0e-13 79.7 61 67.2
QL08p033993 Quercus lobata HOM05D007783 ORTHO05D009740 2.6e-13 79.3 64 70.3
Sopen07g026300 Solanum pennellii HOM05D007783 ORTHO05D009740 2.6e-13 79.3 77 61.0
CiPaw.03G163700 Carya illinoinensis HOM05D007783 ORTHO05D009740 4.5e-13 78.6 57 73.7
Prupe.3G221700 Prunus persica HOM05D007783 ORTHO05D009740 5.9e-13 78.2 77 61.0
Actinidia30505 Actinidia chinensis HOM05D007783 ORTHO05D009740 1.0e-12 77.4 60 66.7
Ciclev10017097m.g Citrus clementina HOM05D007783 ORTHO05D009740 1.7e-12 76.6 65 61.5
Manes.07G029300 Manihot esculenta HOM05D007783 ORTHO05D009740 1.7e-12 76.6 73 61.6
Nitab4.5_0002949g0070 Nicotiana tabacum HOM05D007783 ORTHO05D009740 2.2e-12 76.3 77 59.7
HanXRQChr17g0563901 Helianthus annuus HOM05D007783 ORTHO05D009740 2.9e-12 75.9 74 54.1
Cfa021131 Carpinus fangiana HOM05D007783 ORTHO05D009740 3.8e-12 75.5 79 60.8
Cfa021551 Carpinus fangiana HOM05D007783 ORTHO05D009740 5.0e-12 75.1 73 63.0
Peaxi162Scf00007g01310 Petunia axillaris HOM05D007783 ORTHO05D009740 6.5e-12 74.7 63 66.7
Sed0000870 Sechium edule HOM05D007783 ORTHO05D009740 6.5e-12 74.7 73 61.6
Cc00_g19250 Coffea canephora HOM05D007783 ORTHO05D009740 1.1e-11 73.9 66 65.2
CiPaw.04G118600 Carya illinoinensis HOM05D007783 ORTHO05D009740 1.4e-11 73.6 54 68.5
Manes.10G111600 Manihot esculenta HOM05D007783 ORTHO05D009740 1.4e-11 73.6 72 59.7
Nitab4.5_0017430g0010 Nicotiana tabacum HOM05D007783 ORTHO05D009740 2.5e-11 72.8 77 58.4
Thecc.02G163100 Theobroma cacao HOM05D007783 ORTHO05D009740 4.2e-11 72.0 65 61.5
Glyma.13G305400 Glycine max HOM05D007783 ORTHO05D009740 5.5e-11 71.6 70 57.1
Gohir.A12G135100 Gossypium hirsutum HOM05D007783 ORTHO05D009740 7.2e-11 71.2 61 63.9
Lsat_1_v5_gn_3_43341 Lactuca sativa HOM05D007783 ORTHO05D009740 9.4e-11 70.9 60 58.3
Sed0005014 Sechium edule HOM05D007783 ORTHO05D009740 9.4e-11 70.9 73 57.5
Cfa014449 Carpinus fangiana HOM05D007783 ORTHO05D009740 1.2e-10 70.5 85 56.5
ClCG02G001700 Citrullus lanatus HOM05D000001 ORTHO05D000003 1.2e-10 70.5 73 57.5
Sc21g0001790 Simmondsia chinensis HOM05D007783 ORTHO05D009740 1.2e-10 70.5 75 57.3
Gohir.D12G138800 Gossypium hirsutum HOM05D007783 ORTHO05D009740 1.6e-10 70.1 59 66.1
Gorai.008G150200 Gossypium raimondii HOM05D007783 ORTHO05D009740 1.6e-10 70.1 59 66.1
Medtr2g089010 Medicago truncatula HOM05D007783 ORTHO05D009740 1.6e-10 70.1 74 52.7
CSS0046432 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 2.1e-10 69.7 52 73.1
MELO3C018795.2 Cucumis melo HOM05D007783 ORTHO05D009740 2.1e-10 69.7 80 56.2
Nn1g06962 Nelumbo nucifera HOM05D007783 ORTHO05D009740 2.1e-10 69.7 59 64.4
Aqoxy4G02125 Aquilegia oxysepala HOM05D007783 ORTHO05D009740 2.7e-10 69.3 73 56.2
Cpa.g.sc8.247 Carica papaya HOM05D007783 ORTHO05D009740 2.7e-10 69.3 81 54.3
Sabra17G0027500 Salix brachista HOM05D007783 ORTHO05D009740 2.7e-10 69.3 62 58.1
CSS0007715 Camellia sinensis var. sinensis HOM05D007783 ORTHO05D009740 6.1e-10 68.2 51 72.5
Potri.007G120101 Populus trichocarpa HOM05D007783 ORTHO05D009740 1.0e-09 67.4 73 54.8
SGA_v2.0_scaffold49G18329 Striga asiatica HOM05D007783 ORTHO05D009740 1.0e-09 67.4 60 61.7
COL.COLO4_13003 Corchorus olitorius HOM05D007783 ORTHO05D009740 1.4e-09 67.0 59 62.7
ECA246G5319 Erigeron canadensis HOM05D007783 ORTHO05D009740 1.4e-09 67.0 73 46.6
VMungo1080G1091 Vigna mungo HOM05D007783 ORTHO05D009740 3.0e-09 65.9 65 56.9
Lj3g0010205 Lotus japonicus HOM05D007783 ORTHO05D009740 3.9e-09 65.5 75 56.0
CDE05G0218 Ceratophyllum demersum HOM05D007783 ORTHO05D009740 6.7e-09 64.7 70 51.4
Psat5g265520 Pisum sativum HOM05D007783 ORTHO05D009740 6.7e-09 64.7 58 58.6
Gohir.D04G147200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 1.1e-08 63.9 66 62.1
Gorai.012G133100 Gossypium raimondii HOM05D007783 ORTHO05D009740 1.1e-08 63.9 66 62.1
Gohir.A04G107200 Gossypium hirsutum HOM05D007783 ORTHO05D009740 2.0e-08 63.2 80 56.2
Lalb_Chr19g0135631 Lupinus albus HOM05D007783 ORTHO05D009740 2.0e-08 63.2 61 52.5
Sabra07G0097600 Salix brachista HOM05D007783 ORTHO05D009740 2.0e-08 63.2 73 50.7
AT3G22070 Arabidopsis thaliana HOM05D007783 ORTHO05D009740 4.3e-08 62.0 53 62.3
DCAR_012961 Daucus carota HOM05D007783 ORTHO05D009740 4.3e-08 62.0 79 50.6
VMungo0331G0946 Vigna mungo HOM05D007783 ORTHO05D009740 4.3e-08 62.0 73 49.3
Ca_01568_v3 Cicer arietinum L. HOM05D007783 ORTHO05D009740 5.7e-08 61.6 72 52.8
AL3G36260 Arabidopsis lyrata HOM05D007783 ORTHO05D009740 7.4e-08 61.2 53 60.4
Glyma.12G197200 Glycine max HOM05D007783 ORTHO05D009740 7.4e-08 61.2 75 52.0
EL10Ac3g05472 Beta vulgaris HOM05D007783 ORTHO05D009740 1.7e-07 60.1 62 56.5
C05p41370 Brassica napus HOM05D007783 ORTHO05D009740 1.7e-07 60.1 51 62.7
Sp3g19900 Schrenkiella parvula HOM05D007783 ORTHO05D009740 2.2e-07 59.7 103 41.7
Carub.0003s2223 Capsella rubella HOM05D007783 ORTHO05D009740 3.7e-07 58.9 95 44.2
A01p33040 Brassica napus HOM05D007783 ORTHO05D009740 4.8e-07 58.5 51 60.8
C01p42180 Brassica napus HOM05D007783 ORTHO05D009740 4.8e-07 58.5 51 60.8
BolC1t04180H Brassica oleracea HOM05D007783 ORTHO05D009740 4.8e-07 58.5 51 60.8
BraA01t03426Z Brassica rapa HOM05D007783 ORTHO05D009740 4.8e-07 58.5 51 60.8
THA.LOC104802538 Tarenaya hassleriana HOM05D007783 ORTHO05D009740 4.8e-07 58.5 47 63.8
Phvul.005G112200 Phaseolus vulgaris HOM05D007783 ORTHO05D009740 8.2e-07 57.8 71 52.1
CARHR097930 Cardamine hirsuta HOM05D007783 ORTHO05D009740 1.4e-06 57.0 65 53.8
HPP92_009398 Vanilla planifolia HOM05D048504 ORTHO05D009740 5.3e-06 55.1 70 47.1


User provided reference genes

Program Settings