Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 1.1e-306 1055.8 558 100.0
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 2.3e-89 334.0 573 42.9
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 2.3e-89 334.0 572 43.5
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 2.2e-76 290.8 565 40.9
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 6.5e-68 262.7 567 37.4
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 3.2e-67 260.4 573 38.4
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 4.2e-67 260.0 571 37.7
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 2.5e-64 250.8 550 38.2
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 2.1e-63 247.7 554 35.7
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 6.9e-62 242.7 572 36.0
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 1.0e-60 238.8 555 36.6
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 2.2e-60 237.7 569 35.0
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 3.8e-60 236.9 574 35.7
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 6.5e-60 236.1 325 48.9
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 8.4e-60 235.7 393 42.7
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 2.5e-59 234.2 572 36.0
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 3.0e-57 227.3 590 34.6
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 3.9e-57 226.9 566 37.3
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 1.5e-56 224.9 579 35.4
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 5.7e-56 223.0 353 43.1
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 2.2e-55 221.1 352 42.3
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 3.1e-54 217.2 602 34.1
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 4.1e-54 216.9 574 34.7
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 6.9e-54 216.1 323 44.6
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.0e-54 215.7 316 44.6
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 3.8e-52 210.3 601 33.3
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 3.2e-51 207.2 550 33.5
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 7.2e-51 206.1 559 34.0
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 1.2e-50 205.3 578 33.4
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 2.1e-50 204.5 585 34.0
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 2.1e-50 204.5 570 33.9
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 1.8e-49 201.4 559 33.8
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 2.3e-49 201.1 597 32.7
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 5.1e-49 199.9 565 34.5
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 6.7e-49 199.5 568 33.1
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 1.5e-48 198.4 606 31.7
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 3.3e-48 197.2 589 33.3
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 4.3e-48 196.8 556 33.5
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 1.7e-47 194.9 332 42.5
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 1.7e-47 194.9 563 32.7
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 8.2e-47 192.6 555 31.7
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 1.8e-46 191.4 580 32.2
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 4.1e-46 190.3 497 34.8
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 1.2e-45 188.7 566 31.1
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 1.5e-45 188.3 570 32.1
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 4.5e-45 186.8 388 39.2
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 1.3e-44 185.3 374 36.9
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 1.7e-44 184.9 351 39.6
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 1.7e-44 184.9 552 30.8
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 6.5e-44 183.0 562 33.1
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 8.5e-44 182.6 387 35.1
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 8.5e-44 182.6 381 39.4
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 4.2e-43 180.3 549 32.4
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 2.7e-42 177.6 589 31.9
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 1.7e-39 168.3 569 31.6
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 4.1e-38 163.7 576 30.0
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 7.0e-38 162.9 590 30.2
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 9.1e-38 162.5 390 34.9
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 1.6e-37 161.8 554 29.8
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 4.5e-37 160.2 529 32.7
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 5.9e-37 159.8 570 29.1
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 1.3e-36 158.7 504 31.9
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 5.0e-36 156.8 376 35.1
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 8.5e-36 156.0 472 32.0
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 3.2e-35 154.1 573 29.5
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 5.5e-35 153.3 572 29.5
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 7.2e-35 152.9 578 28.9
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 1.6e-34 151.8 318 39.3
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.7e-34 151.0 374 34.0
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 2.7e-34 151.0 549 29.5
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 2.7e-34 151.0 253 38.7
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 4.7e-34 150.2 506 30.2
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 1.0e-33 149.1 369 35.0
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 1.4e-33 148.7 302 37.4
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 6.7e-33 146.4 493 32.9
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 1.5e-32 145.2 331 36.3
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 1.5e-32 145.2 489 30.9
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 1.5e-32 145.2 307 36.8
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 1.5e-32 145.2 553 29.5
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 2.6e-32 144.4 373 33.8
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 3.3e-32 144.1 405 33.8
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 4.4e-32 143.7 307 37.5
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 9.7e-32 142.5 570 31.6
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 4.8e-31 140.2 550 27.5
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 8.2e-31 139.4 550 30.2
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 1.4e-30 138.7 302 36.4
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.8e-30 138.3 386 35.5
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 1.2e-29 135.6 359 33.7
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 1.2e-29 135.6 374 32.1
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 2.7e-29 134.4 302 35.8
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 3.2e-27 127.5 369 33.1
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 1.2e-26 125.6 478 30.1
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 2.1e-26 124.8 428 29.7
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 2.3e-25 121.3 577 28.8
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.5e-24 118.6 292 35.3
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 2.0e-24 118.2 269 37.2
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 2.6e-24 117.9 378 31.2
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 1.1e-22 112.5 427 30.7
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 2.7e-21 107.8 563 26.5
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.0e-20 105.9 180 40.0
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 1.3e-20 105.5 478 29.1
Oeu035505.1 Olea europaea HOM05D005864 ORTHO05D006770 2.9e-20 104.4 78 73.1
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 5.0e-20 103.6 431 29.0
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 8.5e-20 102.8 474 28.7
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 5.5e-19 100.1 162 44.4
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 7.2e-19 99.8 512 25.4
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 1.6e-18 98.6 475 28.8
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 3.6e-18 97.4 205 36.1
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 1.2e-16 92.4 331 30.8
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 3.4e-16 90.9 424 28.5
Zm00001eb225260 Zea mays HOM05D005864 ORTHO05D006770 1.6e-13 82.0 189 34.4
CSS0011199 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 1.3e-12 79.0 104 59.6
TAR626G0331 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.9e-11 75.1 70 60.0
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 4.7e-10 70.5 122 37.7
Hund01249 Selenicereus undatus HOM05D005864 ORTHO05D006770 1.4e-09 68.9 153 37.9
AagrBONN_evm.TU.Sc2ySwM_369.130 Anthoceros agrestis HOM05D005864 ORTHO05D006770 5.7e-08 63.5 239 32.6
Pp3c7_5470 Physcomitrium patens HOM05D005864 ORTHO05D006770 2.2e-07 61.6 265 28.7
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 2.9e-07 61.2 36 72.2
CSS0018090 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 1.1e-06 59.3 69 46.4


User provided reference genes

Program Settings