Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 1.9e-69 265.8 139 100.0
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 5.1e-22 108.2 140 55.7
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 2.4e-19 99.4 140 52.9
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 2.6e-18 95.9 144 51.4
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 4.4e-18 95.1 142 49.3
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 7.6e-18 94.4 140 49.3
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 7.6e-18 94.4 140 49.3
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 1.7e-17 93.2 134 50.0
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 8.4e-17 90.9 152 46.1
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 1.4e-16 90.1 141 48.9
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 1.9e-16 89.7 137 50.4
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 3.2e-16 89.0 142 51.4
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 9.3e-16 87.4 121 50.4
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 9.3e-16 87.4 131 48.1
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 2.1e-15 86.3 138 47.8
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 3.5e-15 85.5 150 42.0
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.6e-15 85.1 142 46.5
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 6.0e-15 84.7 131 48.9
Oeu033961.1 Olea europaea HOM05D007398 ORTHO05D004912 6.0e-15 84.7 69 72.5
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 7.8e-15 84.3 150 44.7
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 7.8e-15 84.3 141 45.4
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 7.8e-15 84.3 142 46.5
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 7.8e-15 84.3 142 46.5
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 3.9e-14 82.0 144 47.9
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 3.9e-14 82.0 151 46.4
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 8.7e-14 80.9 144 47.9
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.1e-13 80.5 142 45.8
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.5e-13 79.3 142 45.8
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 3.3e-13 79.0 153 45.8
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 5.6e-13 78.2 148 41.9
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 5.6e-13 78.2 142 46.5
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 2.1e-12 76.3 127 44.9
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 2.8e-12 75.9 125 44.0
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 4.8e-12 75.1 107 52.3
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 4.8e-12 75.1 123 43.9
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 8.1e-12 74.3 148 43.9
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 8.1e-12 74.3 87 57.5
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 1.1e-11 73.9 127 41.7
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 1.8e-11 73.2 108 47.2
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 1.8e-11 73.2 103 45.6
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 2.4e-11 72.8 134 44.8
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 4.0e-11 72.0 98 48.0
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 9.0e-11 70.9 127 48.0
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 1.2e-10 70.5 119 42.0
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.5e-10 70.1 133 43.6
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.5e-10 70.1 143 42.0
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 4.4e-10 68.6 124 40.3
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 4.4e-10 68.6 118 39.8
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 7.6e-10 67.8 108 45.4
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 7.6e-10 67.8 123 45.5
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 9.9e-10 67.4 97 48.5
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 1.3e-09 67.0 128 47.7
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 1.3e-09 67.0 114 45.6
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 2.2e-09 66.2 128 40.6
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 4.9e-09 65.1 123 44.7
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 4.9e-09 65.1 128 39.1
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 6.4e-09 64.7 121 40.5
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 8.4e-09 64.3 99 46.5
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.1e-08 63.9 114 44.7
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 1.1e-08 63.9 148 40.5
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 1.4e-08 63.5 137 36.5
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 3.2e-08 62.4 117 44.4
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 3.2e-08 62.4 117 44.4
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 3.2e-08 62.4 129 39.5
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 7.1e-08 61.2 99 41.4
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.2e-07 60.5 123 42.3
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 1.6e-07 60.1 139 37.4
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 2.1e-07 59.7 122 35.2
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 2.7e-07 59.3 139 40.3
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 3.5e-07 58.9 122 38.5
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 7.9e-07 57.8 123 41.5
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 1.3e-06 57.0 141 37.6
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.3e-06 57.0 133 36.8
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 1.3e-06 57.0 102 41.2
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 2.3e-06 56.2 116 40.5
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 2.3e-06 56.2 111 42.3
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 3.0e-06 55.8 113 38.1
AT4G26960 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 3.9e-06 55.5 135 37.8
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 3.9e-06 55.5 133 36.8
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 3.9e-06 55.5 123 41.5
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 3.9e-06 55.5 120 44.2
CARHR234560 Cardamine hirsuta HOM05D009587 ORTHO05D004912 6.6e-06 54.7 131 35.1
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 6.6e-06 54.7 116 40.5
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 6.6e-06 54.7 135 35.6
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 6.6e-06 54.7 101 39.6
BraA03t10733Z Brassica rapa HOM05D009587 ORTHO05D004912 8.7e-06 54.3 114 36.8


User provided reference genes

Program Settings