Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041896.1 Olea europaea HOM05D006108 ORTHO05D007605 1.8e-34 148.7 74 100.0
Oeu008040.1 Olea europaea HOM05D006108 ORTHO05D007605 1.3e-29 132.5 72 87.5
Ciclev10033455m.g Citrus clementina HOM05D006108 ORTHO05D007605 1.8e-26 122.1 70 84.3
DCAR_026728 Daucus carota HOM05D006108 ORTHO05D007605 2.4e-26 121.7 70 82.9
TPR.G38355 Trifolium pratense HOM05D006108 ORTHO05D007605 9.0e-26 119.8 73 75.3
CSS0049683 Camellia sinensis var. sinensis HOM05D006108 ORTHO05D007605 2.6e-25 118.2 70 82.9
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 2.6e-25 118.2 69 82.6
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 3.4e-25 117.9 69 82.6
MD13G1043700 Malus domestica HOM05D006108 ORTHO05D007605 4.4e-25 117.5 69 79.7
Medtr5g055190 Medicago truncatula HOM05D006108 ORTHO05D007605 4.4e-25 117.5 73 74.0
Prupe.1G308800 Prunus persica HOM05D006108 ORTHO05D007605 4.4e-25 117.5 68 82.4
Migut.L01077 Erythranthe guttata HOM05D006108 ORTHO05D007605 5.8e-25 117.1 69 84.1
Cc11_g10300 Coffea canephora HOM05D006108 ORTHO05D007605 9.9e-25 116.3 71 77.5
Potri.008G119200 Populus trichocarpa HOM05D006108 ORTHO05D007605 1.7e-24 115.5 69 76.8
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 2.2e-24 115.2 73 75.3
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.2e-24 115.2 69 81.2
Gohir.A09G177600 Gossypium hirsutum HOM05D006108 ORTHO05D007605 2.9e-24 114.8 70 78.6
Gohir.D09G173100 Gossypium hirsutum HOM05D006108 ORTHO05D007605 2.9e-24 114.8 70 78.6
Gorai.006G195000 Gossypium raimondii HOM05D006108 ORTHO05D007605 2.9e-24 114.8 70 78.6
MD16G1044500 Malus domestica HOM05D006108 ORTHO05D007605 2.9e-24 114.8 68 76.5
Psat2g097920 Pisum sativum HOM05D006108 ORTHO05D007605 3.8e-24 114.4 69 76.8
PGR102G2516 Punica granatum HOM05D006108 ORTHO05D007605 3.8e-24 114.4 71 77.5
Sabra08G0090500 Salix brachista HOM05D006108 ORTHO05D007605 8.4e-24 113.2 69 75.4
Atru.chr9.818 Acer truncatum HOM05D006108 ORTHO05D007605 1.1e-23 112.8 71 76.1
HanXRQChr02g0058721 Helianthus annuus HOM05D006108 ORTHO05D007605 1.4e-23 112.5 68 80.9
Lalb_Chr10g0099931 Lupinus albus HOM05D006108 ORTHO05D007605 1.4e-23 112.5 68 76.5
TWI31G1391 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 2.4e-23 111.7 68 76.5
TWI79G0681 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 2.4e-23 111.7 69 76.8
Lsat_1_v5_gn_8_39200 Lactuca sativa HOM05D006108 ORTHO05D007605 3.2e-23 111.3 68 79.4
Lj2g0013090 Lotus japonicus HOM05D006108 ORTHO05D007605 3.2e-23 111.3 67 77.6
QL01p043861 Quercus lobata HOM05D006108 ORTHO05D007605 4.2e-23 110.9 69 73.9
Dinv04481 Davidia involucrata HOM05D001580 ORTHO05D001517 5.4e-23 110.5 71 70.4
Nitab4.5_0003285g0040 Nicotiana tabacum HOM05D006108 ORTHO05D007605 5.4e-23 110.5 67 79.1
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 7.1e-23 110.2 71 73.2
Manes.06G070100 Manihot esculenta HOM05D006108 ORTHO05D007605 9.3e-23 109.8 68 75.0
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 9.3e-23 109.8 70 74.3
Manes.14G100500 Manihot esculenta HOM05D006108 ORTHO05D007605 2.1e-22 108.6 68 76.5
Thecc.03G033400 Theobroma cacao HOM05D006108 ORTHO05D007605 2.7e-22 108.2 70 71.4
Nitab4.5_0001914g0010 Nicotiana tabacum HOM05D006108 ORTHO05D007605 3.5e-22 107.8 67 77.6
PSO017G5628 Papaver somniferum HOM05D006108 ORTHO05D007605 4.6e-22 107.5 73 69.9
Dinv09807 Davidia involucrata HOM05D006108 ORTHO05D007605 6.0e-22 107.1 70 75.7
MD14G1225800 Malus domestica HOM05D006108 ORTHO05D007605 7.8e-22 106.7 68 75.0
Prupe.5G220300 Prunus persica HOM05D006108 ORTHO05D007605 7.8e-22 106.7 68 77.9
Actinidia35084 Actinidia chinensis HOM05D006108 ORTHO05D007605 1.3e-21 105.9 69 73.9
Sed0000256 Sechium edule HOM05D006108 ORTHO05D007605 1.3e-21 105.9 70 71.4
FvH4_5g12320 Fragaria vesca HOM05D006108 ORTHO05D007605 1.7e-21 105.5 68 76.5
FAN13G1808 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.7e-21 105.5 68 76.5
FAN18G0723 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.7e-21 105.5 68 76.5
FAN18G1336 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.7e-21 105.5 68 76.5
Phvul.003G034700 Phaseolus vulgaris HOM05D006108 ORTHO05D007605 1.7e-21 105.5 68 75.0
RcHm_v2.0_Chr7g0185241 Rosa chinensis HOM05D006108 ORTHO05D007605 1.7e-21 105.5 68 76.5
Gohir.A12G168100 Gossypium hirsutum HOM05D006108 ORTHO05D007605 2.3e-21 105.1 68 75.0
Gorai.008G184200 Gossypium raimondii HOM05D006108 ORTHO05D007605 2.3e-21 105.1 68 75.0
Nn4g23806 Nelumbo nucifera HOM05D006108 ORTHO05D007605 2.3e-21 105.1 73 63.0
Rhsim12G0143800 Rhododendron simsii HOM05D006108 ORTHO05D007605 2.3e-21 105.1 70 72.9
BcaB07g30252 Brassica carinata HOM05D006108 ORTHO05D007605 3.0e-21 104.8 67 70.1
QL10p025064 Quercus lobata HOM05D006108 ORTHO05D007605 3.0e-21 104.8 73 68.5
Sp2g15090 Schrenkiella parvula HOM05D006108 ORTHO05D007605 3.0e-21 104.8 71 64.8
BcaC03g17291 Brassica carinata HOM05D006108 ORTHO05D007605 3.9e-21 104.4 69 66.7
BolC2t11319H Brassica oleracea HOM05D006108 ORTHO05D007605 3.9e-21 104.4 69 66.7
MD06G1214900 Malus domestica HOM05D006108 ORTHO05D007605 3.9e-21 104.4 68 73.5
Thhalv10005176m.g Eutrema salsugineum HOM05D006108 ORTHO05D007605 5.1e-21 104.0 66 69.7
FAN12G0874 Fragaria x ananassa HOM05D006108 ORTHO05D007605 5.1e-21 104.0 76 71.1
Ciclev10022919m.g Citrus clementina HOM05D006108 ORTHO05D007605 6.6e-21 103.6 71 70.4
Duzib084G1067 Durio zibethinus HOM05D006108 ORTHO05D007605 6.6e-21 103.6 70 71.4
Glyma.01G082600 Glycine max HOM05D006108 ORTHO05D007605 6.6e-21 103.6 68 73.5
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 6.6e-21 103.6 71 67.6
AL5G14490 Arabidopsis lyrata HOM05D006108 ORTHO05D007605 8.7e-21 103.2 71 63.4
BcaC06g33947 Brassica carinata HOM05D006108 ORTHO05D007605 8.7e-21 103.2 73 63.0
CiPaw.15G083500 Carya illinoinensis HOM05D006108 ORTHO05D007605 8.7e-21 103.2 68 72.1
Manes.05G140027 Manihot esculenta HOM05D006108 ORTHO05D007605 8.7e-21 103.2 68 75.0
C02p52370 Brassica napus HOM05D006108 ORTHO05D007605 1.1e-20 102.8 68 66.2
CAN.G388.38 Capsicum annuum HOM05D006108 ORTHO05D007605 1.1e-20 102.8 67 73.1
Gohir.D12G171700 Gossypium hirsutum HOM05D006108 ORTHO05D007605 1.1e-20 102.8 68 73.5
A02p34100 Brassica napus HOM05D006108 ORTHO05D007605 1.5e-20 102.4 69 66.7
A06p42440 Brassica napus HOM05D006108 ORTHO05D007605 1.5e-20 102.4 73 63.0
BraA06t27159Z Brassica rapa HOM05D006108 ORTHO05D007605 1.5e-20 102.4 73 63.0
Eucgr.B03028 Eucalyptus grandis HOM05D006108 ORTHO05D007605 1.5e-20 102.4 68 70.6
BcaC06g31111 Brassica carinata HOM05D006108 ORTHO05D007605 1.9e-20 102.1 70 61.4
AT3G25855 Arabidopsis thaliana HOM05D006108 ORTHO05D007605 2.5e-20 101.7 71 62.0
BolC7t44019H Brassica oleracea HOM05D006108 ORTHO05D007605 2.5e-20 101.7 73 63.0
CsaV3_1G006560 Cucumis sativus L. HOM05D006108 ORTHO05D007605 2.5e-20 101.7 68 69.1
FAN08G0393 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.5e-20 101.7 68 73.5
Sc14g0007540 Simmondsia chinensis HOM05D006108 ORTHO05D007605 2.5e-20 101.7 69 71.0
C07p34870 Brassica napus HOM05D006108 ORTHO05D007605 4.3e-20 100.9 73 61.6
BraA02t08427Z Brassica rapa HOM05D006108 ORTHO05D007605 4.3e-20 100.9 68 66.2
Cfa019791 Carpinus fangiana HOM05D006108 ORTHO05D007605 4.3e-20 100.9 71 67.6
CsaV3_6G003400 Cucumis sativus L. HOM05D006108 ORTHO05D007605 7.3e-20 100.1 73 64.4
THA.LOC104824033 Tarenaya hassleriana HOM05D006108 ORTHO05D007605 7.3e-20 100.1 71 66.2
CARHR146800 Cardamine hirsuta HOM05D006108 ORTHO05D007605 9.6e-20 99.8 68 64.7
Glyma.07G090500 Glycine max HOM05D006108 ORTHO05D007605 9.6e-20 99.8 70 70.0
Glyma.09G185400 Glycine max HOM05D006108 ORTHO05D007605 9.6e-20 99.8 70 68.6
CDE05G0497 Ceratophyllum demersum HOM05D006108 ORTHO05D007605 1.6e-19 99.0 68 69.1
Carub.0005s0368 Capsella rubella HOM05D006108 ORTHO05D007605 2.1e-19 98.6 68 60.3
CiPaw.15G129300 Carya illinoinensis HOM05D006108 ORTHO05D007605 2.1e-19 98.6 69 72.5
Nn3g17803 Nelumbo nucifera HOM05D006108 ORTHO05D007605 2.1e-19 98.6 71 66.2
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 2.8e-19 98.2 70 67.1
Gohir.A09G047400 Gossypium hirsutum HOM05D006108 ORTHO05D007605 3.6e-19 97.8 70 65.7
Gohir.D09G048600 Gossypium hirsutum HOM05D006108 ORTHO05D007605 3.6e-19 97.8 70 65.7
Gorai.006G061500 Gossypium raimondii HOM05D006108 ORTHO05D007605 3.6e-19 97.8 70 65.7
Lj2g0017619 Lotus japonicus HOM05D006108 ORTHO05D007605 3.6e-19 97.8 70 67.1
TPR.G35239 Trifolium pratense HOM05D006108 ORTHO05D007605 3.6e-19 97.8 70 67.1
Psat6g222560 Pisum sativum HOM05D006108 ORTHO05D007605 4.8e-19 97.4 70 65.7
Sopen05g012490 Solanum pennellii HOM05D006108 ORTHO05D007605 4.8e-19 97.4 67 73.1
Eucgr.B00718 Eucalyptus grandis HOM05D006108 ORTHO05D007605 6.2e-19 97.1 73 60.3
Phvul.004G158700 Phaseolus vulgaris HOM05D006108 ORTHO05D007605 8.1e-19 96.7 71 64.8
Sed0021850 Sechium edule HOM05D006108 ORTHO05D007605 1.4e-18 95.9 68 67.6
arahy.Tifrunner.gnm1.ann1.1V8BDZ Arachis hypogaea HOM05D006108 ORTHO05D007605 2.4e-18 95.1 70 67.1
arahy.Tifrunner.gnm1.ann1.L19XPP Arachis hypogaea HOM05D006108 ORTHO05D007605 2.4e-18 95.1 70 67.1
Cpa.g.sc1.185 Carica papaya HOM05D006108 ORTHO05D007605 5.8e-17 90.5 58 72.4
Nitab4.5_0001599g0060 Nicotiana tabacum HOM05D006108 ORTHO05D007605 9.9e-17 89.7 73 60.3
Nitab4.5_0004412g0100 Nicotiana tabacum HOM05D006108 ORTHO05D007605 9.9e-17 89.7 73 60.3
Sopen03g038460 Solanum pennellii HOM05D006108 ORTHO05D007605 9.9e-17 89.7 70 64.3
PGSC0003DMG402005714 Solanum tuberosum HOM05D006108 ORTHO05D007605 9.9e-17 89.7 70 64.3
Os09g0408550 Oryza sativa ssp. japonica HOM05D006108 ORTHO05D007605 1.1e-15 86.3 68 58.8
ECA233G5877 Erigeron canadensis HOM05D006108 ORTHO05D007605 7.1e-15 83.6 56 75.0
Zm00001eb099300 Zea mays HOM05D006108 ORTHO05D007605 2.7e-14 81.6 71 56.3
HPP92_026959 Vanilla planifolia HOM05D006108 ORTHO05D007605 3.5e-14 81.3 68 58.8
Rhsim09G0109500 Rhododendron simsii HOM05D006290 ORTHO05D007734 3.9e-13 77.8 47 80.9
arahy.Tifrunner.gnm1.ann1.384K0G Arachis hypogaea HOM05D006108 ORTHO05D007605 7.4e-12 73.6 51 70.6
Hund05757 Selenicereus undatus HOM05D006108 ORTHO05D007605 9.6e-12 73.2 46 73.9
ClCG04G011190 Citrullus lanatus HOM05D006108 ORTHO05D007605 4.8e-11 70.9 44 72.7
Peaxi162Scf00015g00844 Petunia axillaris HOM05D006108 ORTHO05D007605 6.2e-11 70.5 56 62.5
Sed0027931 Sechium edule HOM05D006108 ORTHO05D007605 4.0e-10 67.8 46 71.7
CAN.G438.131 Capsicum annuum HOM05D006108 ORTHO05D007605 1.2e-09 66.2 49 63.3
FAN04G0077 Fragaria x ananassa HOM05D006108 ORTHO05D007605 3.4e-09 64.7 55 67.3
PGSC0003DMG400010902 Solanum tuberosum HOM05D006108 ORTHO05D007605 1.7e-08 62.4 39 76.9
ClCG08G005220 Citrullus lanatus HOM05D006108 ORTHO05D007605 4.9e-08 60.8 71 49.3
TWI15G1195 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 4.9e-08 60.8 41 73.2


User provided reference genes

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