Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041877.1 Olea europaea HOM05D004264 ORTHO05D004680 1.8e-23 111.7 54 100.0
Oeu041878.1 Olea europaea HOM05D004264 ORTHO05D004680 1.8e-23 111.7 54 100.0
Oeu005191.1 Olea europaea HOM05D004264 ORTHO05D004680 1.0e-15 85.9 53 75.5
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 1.5e-14 82.0 53 71.7
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 5.7e-14 80.1 52 73.1
PGSC0003DMG400031135 Solanum tuberosum HOM05D004264 ORTHO05D004680 5.7e-14 80.1 53 69.8
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 7.5e-14 79.7 52 65.4
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 7.5e-14 79.7 52 63.5
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 1.3e-13 79.0 52 69.2
Haze_21060 Corylus avellana HOM05D004264 ORTHO05D004680 1.7e-13 78.6 51 68.6
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 1.7e-13 78.6 52 67.3
Cc05_g01720 Coffea canephora HOM05D004264 ORTHO05D004680 2.2e-13 78.2 53 66.0
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 2.8e-13 77.8 53 66.0
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 2.8e-13 77.8 53 64.2
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 3.7e-13 77.4 52 63.5
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 3.7e-13 77.4 52 63.5
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 3.7e-13 77.4 52 63.5
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 4.9e-13 77.0 52 61.5
FvH4_6g10921 Fragaria vesca HOM05D004264 ORTHO05D004680 4.9e-13 77.0 52 67.3
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 4.9e-13 77.0 52 67.3
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 4.9e-13 77.0 52 67.3
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 4.9e-13 77.0 52 67.3
RcHm_v2.0_Chr3g0462171 Rosa chinensis HOM05D004264 ORTHO05D004680 4.9e-13 77.0 52 67.3
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 6.3e-13 76.6 51 66.7
DCAR_018675 Daucus carota HOM05D004264 ORTHO05D004680 6.3e-13 76.6 54 66.7
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 6.3e-13 76.6 52 67.3
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 8.3e-13 76.3 52 65.4
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 8.3e-13 76.3 52 65.4
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.8e-12 75.1 52 65.4
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.8e-12 75.1 52 65.4
Rhsim05G0223700 Rhododendron simsii HOM05D004264 ORTHO05D004680 1.8e-12 75.1 53 64.2
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 3.2e-12 74.3 51 66.7
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 4.1e-12 73.9 51 66.7
Peaxi162Scf00522g00315 Petunia axillaris HOM05D004264 ORTHO05D004680 4.1e-12 73.9 53 62.3
Ca_07679_v3 Cicer arietinum L. HOM05D004264 ORTHO05D004680 7.0e-12 73.2 53 62.3
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 9.2e-12 72.8 52 57.7
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 9.2e-12 72.8 53 64.2
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 1.2e-11 72.4 50 62.0
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 1.2e-11 72.4 53 64.2
Carub.0006s0026 Capsella rubella HOM05D004264 ORTHO05D004680 1.6e-11 72.0 52 53.8
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 1.6e-11 72.0 51 62.7
VMungo1383G0682 Vigna mungo HOM05D004264 ORTHO05D004680 1.6e-11 72.0 53 62.3
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 2.0e-11 71.6 53 60.4
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 2.7e-11 71.2 51 62.7
VMungo1215G3396 Vigna mungo HOM05D004264 ORTHO05D004680 2.7e-11 71.2 53 60.4
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 3.5e-11 70.9 53 60.4
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 4.5e-11 70.5 53 62.3
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 7.8e-11 69.7 53 58.5
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 7.8e-11 69.7 51 62.7
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 1.0e-10 69.3 52 51.9
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 1.0e-10 69.3 53 58.5
HanXRQChr02g0036821 Helianthus annuus HOM05D004264 ORTHO05D004680 1.0e-10 69.3 51 58.8
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 1.3e-10 68.9 53 58.5
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 1.3e-10 68.9 52 59.6
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 1.3e-10 68.9 53 60.4
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 1.7e-10 68.6 53 58.5
AUR62030782 Chenopodium quinoa HOM05D004264 ORTHO05D004680 2.3e-10 68.2 50 64.0
Potri.012G107200 Populus trichocarpa HOM05D004264 ORTHO05D004680 2.3e-10 68.2 51 60.8
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 2.3e-10 68.2 49 59.2
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 2.3e-10 68.2 52 55.8
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 3.9e-10 67.4 52 59.6
TPR.G1155 Trifolium pratense HOM05D004264 ORTHO05D004680 3.9e-10 67.4 51 60.8
EL10Ac5g12510 Beta vulgaris HOM05D004264 ORTHO05D004680 5.0e-10 67.0 50 64.0
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 6.6e-10 66.6 52 50.0
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 6.6e-10 66.6 52 50.0
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 1.1e-09 65.9 52 50.0
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 1.5e-09 65.5 51 51.0
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 1.5e-09 65.5 51 51.0
BraA01t04327Z Brassica rapa HOM05D004264 ORTHO05D004680 1.9e-09 65.1 51 51.0
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 1.9e-09 65.1 52 48.1
AUR62030512 Chenopodium quinoa HOM05D004264 ORTHO05D004680 1.9e-09 65.1 50 64.0
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 2.5e-09 64.7 52 48.1
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 2.5e-09 64.7 49 59.2
Migut.J00116 Erythranthe guttata HOM05D004264 ORTHO05D004680 3.3e-09 64.3 53 62.3
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 3.3e-09 64.3 48 62.5
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 7.3e-09 63.2 52 53.8
arahy.Tifrunner.gnm1.ann1.IC5F1T Arachis hypogaea HOM05D004264 ORTHO05D004680 9.5e-09 62.8 51 56.9
HanXRQChr13g0390251 Helianthus annuus HOM05D004264 ORTHO05D004680 9.5e-09 62.8 52 53.8
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 9.5e-09 62.8 54 53.7
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 9.5e-09 62.8 52 55.8
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 1.2e-08 62.4 52 46.2
unitig_0.g2545 Utricularia gibba HOM05D004264 ORTHO05D004680 1.6e-08 62.0 52 48.1
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 2.8e-08 61.2 52 50.0
arahy.Tifrunner.gnm1.ann1.G0I7HS Arachis hypogaea HOM05D004264 ORTHO05D004680 3.6e-08 60.8 51 54.9
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 3.6e-08 60.8 53 52.8
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 1.4e-07 58.9 51 49.0
Aqoxy3G03064 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 4.0e-07 57.4 49 46.9
CSS0010779 Camellia sinensis var. sinensis HOM05D004264 ORTHO05D004680 5.2e-07 57.0 40 70.0
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 5.2e-07 57.0 53 50.9
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 8.9e-07 56.2 53 50.9
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 1.2e-06 55.8 52 55.8
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 2.6e-06 54.7 49 53.1
BcaB04g18563 Brassica carinata HOM05D004264 ORTHO05D004680 9.8e-06 52.8 54 46.3


User provided reference genes

Program Settings