Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 0.0e+00 1547.3 781 100.0
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 1.2e-274 949.9 756 64.3
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 1.3e-271 939.9 762 63.8
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 1.1e-262 910.2 777 59.6
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 4.1e-262 908.3 764 59.9
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 2.8e-255 885.6 753 59.1
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 5.0e-252 874.8 764 57.3
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 1.5e-251 873.2 742 58.1
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 3.6e-250 868.6 770 58.1
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 4.7e-250 868.2 758 57.8
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 4.6e-245 851.7 754 58.5
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 1.3e-244 850.1 758 55.8
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 7.3e-243 844.3 750 55.9
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 3.4e-240 835.5 834 53.5
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 9.8e-240 833.9 760 55.8
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 1.9e-238 829.7 747 55.3
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 4.1e-238 828.6 767 54.8
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 4.6e-237 825.1 765 55.4
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 3.0e-236 822.4 764 53.9
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 3.9e-236 822.0 741 55.6
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 7.3e-235 817.8 684 58.6
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 8.1e-234 814.3 741 55.5
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 2.3e-233 812.8 741 55.3
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 4.0e-233 812.0 729 56.2
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 5.2e-233 811.6 744 55.2
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.6e-232 809.3 756 55.0
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 5.8e-232 808.1 791 51.8
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 3.7e-231 805.4 742 55.4
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 1.4e-230 803.5 736 54.5
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 7.1e-230 801.2 740 54.5
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 1.6e-229 800.0 760 53.8
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 1.0e-228 797.3 656 59.6
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 1.1e-227 793.9 728 54.8
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 1.5e-227 793.5 753 55.0
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 9.5e-227 790.8 773 54.1
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 1.2e-226 790.4 771 51.9
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 3.6e-226 788.9 772 51.9
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.8e-225 786.6 745 53.8
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 1.8e-225 786.6 725 53.9
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 8.9e-225 784.3 740 53.6
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.5e-224 783.5 765 53.2
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 2.0e-224 783.1 728 54.0
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 2.6e-224 782.7 769 51.6
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 1.7e-223 780.0 748 52.0
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 6.4e-223 778.1 728 54.5
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 4.6e-221 771.9 749 52.6
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 3.0e-220 769.2 723 53.3
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 6.6e-220 768.1 736 53.0
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 3.3e-219 765.8 737 52.2
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 1.2e-218 763.8 747 51.9
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 4.7e-218 761.9 761 51.9
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 6.2e-218 761.5 736 52.7
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 2.0e-216 756.5 758 51.3
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 7.6e-216 754.6 685 54.6
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 4.9e-215 751.9 754 51.5
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 6.0e-213 745.0 753 52.1
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 1.3e-212 743.8 652 57.5
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.9e-212 742.3 663 57.0
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 6.6e-212 741.5 758 51.1
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 1.9e-211 740.0 744 50.3
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 6.2e-210 734.9 759 50.7
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 3.4e-208 729.2 773 50.2
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 1.3e-207 727.2 773 48.6
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.6e-205 720.3 654 55.8
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 3.3e-203 712.6 672 55.2
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 2.8e-202 709.5 776 48.2
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 8.1e-202 708.0 755 49.1
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 6.9e-201 704.9 767 49.2
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 7.6e-200 701.4 769 49.0
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 3.9e-196 689.1 688 50.9
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 2.5e-195 686.4 765 47.8
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 2.5e-195 686.4 774 48.4
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 2.2e-191 673.3 774 47.9
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 1.3e-188 664.1 757 46.2
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 5.5e-182 642.1 733 47.1
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 3.1e-177 626.3 632 52.1
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 1.4e-174 617.5 801 44.8
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 1.0e-172 611.3 763 45.5
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 6.3e-162 575.5 733 43.5
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 1.1e-150 538.1 893 37.4
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 1.6e-149 534.3 749 41.5
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 1.1e-145 521.5 779 38.9
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 8.5e-143 511.9 780 38.6
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 9.8e-139 498.4 439 58.5
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 2.4e-137 493.8 455 55.2
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 6.8e-132 475.7 431 55.9
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 5.7e-131 472.6 765 36.3
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 6.0e-120 436.0 798 36.0
CSS0020168 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 6.6e-119 432.6 480 50.6
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 2.3e-116 424.1 476 48.5
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 1.2e-115 421.8 356 59.6
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 1.3e-114 418.3 415 52.5
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 2.8e-109 400.6 549 41.9
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 2.3e-103 380.9 445 47.6
ATR0585G046 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.3e-93 348.6 366 50.0
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 3.8e-82 310.5 316 50.0
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.3e-71 274.6 295 50.5
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 2.5e-70 271.2 290 49.0
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 5.9e-67 260.0 322 46.6
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 2.2e-61 241.5 187 64.7
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 5.3e-52 210.3 489 29.9
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 3.3e-46 191.0 191 48.2
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 1.5e-38 165.6 179 51.4
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 1.5e-38 165.6 179 51.4
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 7.5e-38 163.3 154 55.2
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 7.5e-38 163.3 154 55.2
CDE02G0065 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 7.7e-35 153.3 213 39.9
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 5.0e-34 150.6 206 43.2
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.5e-33 148.3 252 36.5
Gorai.011G223800 Gossypium raimondii HOM05D005193 ORTHO05D006316 9.4e-33 146.4 164 47.0
ATR0585G123 Amborella trichopoda HOM05D005193 ORTHO05D006316 4.1e-28 131.0 179 41.9
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 8.6e-26 123.2 125 48.0
CAN.G1219.2 Capsicum annuum HOM05D005193 ORTHO05D006316 1.1e-25 122.9 96 51.0
AagrBONN_evm.TU.Sc2ySwM_362.1473 Anthoceros agrestis HOM05D005193 ORTHO05D006316 9.5e-25 119.8 96 62.5
Sabra06G0024500 Salix brachista HOM05D005193 ORTHO05D006316 2.3e-23 115.2 85 64.7
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 6.8e-23 113.6 117 47.0
Sabra16G0098300 Salix brachista HOM05D005193 ORTHO05D006316 5.7e-22 110.5 107 55.1
Gohir.D10G199632 Gossypium hirsutum HOM05D005193 ORTHO05D006316 2.8e-21 108.2 135 44.4
CSS0047254 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.9e-17 95.5 200 33.0
Gorai.001G274400 Gossypium raimondii HOM05D005193 ORTHO05D006316 3.0e-15 88.2 122 41.0
Gohir.D08G017066 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.3e-13 82.8 75 56.0
MD16G1253600 Malus domestica HOM05D005193 ORTHO05D006316 5.0e-10 70.9 54 68.5
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 8.6e-10 70.1 99 41.4
SEGI_24122 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 2.5e-09 68.6 76 44.7
SEGI_35263 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 2.5e-09 68.6 61 45.9
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 2.3e-07 62.0 68 48.5
SEGI_10601 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 5.2e-07 60.8 75 41.3
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 8.9e-07 60.1 58 44.8
CDE02G4328 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.5e-06 59.3 78 39.7
SEGI_12195 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 4.4e-06 57.8 71 35.2


User provided reference genes

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