Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 3.9e-131 471.5 239 100.0
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 5.5e-109 397.9 241 82.6
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 3.6e-108 395.2 239 82.0
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 1.0e-107 393.7 241 80.1
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 5.2e-107 391.3 239 81.2
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 1.1e-106 390.2 239 81.2
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 2.0e-106 389.4 239 79.9
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 2.6e-106 389.0 235 80.9
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.6e-106 389.0 235 80.9
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 7.4e-106 387.5 235 80.4
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 7.4e-106 387.5 235 80.0
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 7.4e-106 387.5 239 79.1
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.3e-105 386.7 235 80.0
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.3e-105 386.7 235 80.0
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.3e-105 386.7 239 79.9
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 6.3e-105 384.4 239 79.5
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 6.3e-105 384.4 231 81.0
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 1.8e-104 382.9 240 79.6
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 3.1e-104 382.1 239 78.2
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 4.1e-104 381.7 227 81.5
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 7.0e-104 380.9 228 79.8
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 7.0e-104 380.9 238 78.6
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 1.6e-103 379.8 239 78.2
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 1.6e-103 379.8 225 81.3
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 1.6e-103 379.8 225 80.9
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 1.6e-103 379.8 239 77.8
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 2.0e-103 379.4 239 77.8
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 2.6e-103 379.0 239 78.7
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 2.6e-103 379.0 231 80.1
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 2.6e-103 379.0 239 77.4
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 3.5e-103 378.6 240 77.1
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 3.5e-103 378.6 241 79.7
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 3.5e-103 378.6 239 78.2
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 3.5e-103 378.6 239 76.6
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 7.7e-103 377.5 239 77.0
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 7.7e-103 377.5 239 77.8
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 1.0e-102 377.1 239 79.5
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 1.0e-102 377.1 239 76.6
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 2.9e-102 375.6 239 77.0
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 2.9e-102 375.6 228 78.9
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 2.9e-102 375.6 235 77.9
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 3.8e-102 375.2 239 77.0
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 5.0e-102 374.8 239 79.1
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 8.5e-102 374.0 239 77.0
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 1.1e-101 373.6 228 78.9
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 1.1e-101 373.6 240 77.9
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 2.5e-101 372.5 239 75.7
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 2.5e-101 372.5 239 79.5
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 4.2e-101 371.7 239 76.6
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 5.5e-101 371.3 239 76.6
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 5.5e-101 371.3 221 80.5
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 5.5e-101 371.3 221 80.5
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 5.5e-101 371.3 228 77.6
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 9.4e-101 370.5 221 80.5
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 9.4e-101 370.5 239 75.7
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 1.6e-100 369.8 228 78.1
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 6.1e-100 367.9 239 77.4
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 1.4e-99 366.7 239 75.3
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 1.8e-99 366.3 239 75.7
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 1.8e-99 366.3 235 75.7
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 2.3e-99 365.9 304 65.1
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 5.2e-99 364.8 236 77.1
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 6.7e-99 364.4 235 75.3
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 8.8e-99 364.0 239 75.3
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 8.8e-99 364.0 228 77.2
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 8.8e-99 364.0 235 74.9
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 1.5e-98 363.2 239 74.9
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 2.0e-98 362.8 240 74.2
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 2.0e-98 362.8 239 77.0
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 2.0e-98 362.8 228 76.8
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 4.4e-98 361.7 240 74.2
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 2.2e-97 359.4 240 76.2
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 4.8e-97 358.2 240 75.0
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 6.3e-97 357.8 239 72.8
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 6.3e-97 357.8 222 78.8
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 6.3e-97 357.8 239 72.4
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 1.1e-96 357.1 239 74.9
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 2.4e-96 355.9 239 72.8
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 3.1e-96 355.5 233 76.0
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 4.1e-96 355.1 226 75.2
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 5.3e-96 354.8 239 72.4
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 5.3e-96 354.8 239 77.0
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 1.3e-94 350.1 236 72.5
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 1.3e-94 350.1 239 72.4
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 1.7e-94 349.7 229 76.4
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 2.9e-94 349.0 220 76.4
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 2.9e-94 349.0 239 72.8
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 3.8e-94 348.6 235 72.3
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 5.0e-94 348.2 225 73.8
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 8.5e-94 347.4 240 72.1
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 1.5e-93 346.7 239 71.1
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 1.5e-93 346.7 221 74.2
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 1.9e-93 346.3 239 70.7
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 1.9e-93 346.3 239 72.4
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 2.5e-93 345.9 220 76.4
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 3.2e-93 345.5 221 75.6
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 3.2e-93 345.5 237 72.6
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 3.2e-93 345.5 227 76.2
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 4.2e-93 345.1 237 69.2
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 5.5e-93 344.7 220 75.9
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 5.5e-93 344.7 239 71.5
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 9.4e-93 344.0 225 73.3
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 3.6e-92 342.0 226 75.2
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 8.0e-92 340.9 226 71.7
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 6.8e-91 337.8 220 75.0
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 6.3e-89 331.3 322 56.8
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 8.3e-89 330.9 239 70.7
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 8.3e-89 330.9 240 70.4
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 9.1e-88 327.4 246 66.7
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 2.9e-86 322.4 187 81.3
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 8.6e-86 320.9 225 71.1
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.9e-85 319.7 239 68.6
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 3.3e-85 318.9 219 70.8
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 3.4e-82 308.9 218 65.6
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 1.1e-80 303.9 239 64.9
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 3.1e-80 302.4 192 76.6
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 4.1e-80 302.0 228 61.8
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 4.1e-80 302.0 217 63.6
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 7.0e-80 301.2 239 64.9
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 2.3e-78 296.2 178 78.7
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 8.6e-78 294.3 198 71.2
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 1.5e-77 293.5 233 65.7
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 6.1e-76 288.1 204 69.1
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 4.4e-74 282.0 235 55.7
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 8.6e-70 267.7 235 62.1
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 1.7e-65 253.4 185 69.2
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 1.7e-65 253.4 168 70.8
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 4.9e-65 251.9 197 64.0
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 7.8e-55 218.0 157 64.3
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 1.9e-53 213.4 218 49.1
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 2.4e-43 179.9 106 86.8
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 1.3e-38 164.1 119 63.9
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 6.9e-35 151.8 190 38.4
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 1.1e-29 134.4 97 72.2
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 3.2e-24 116.3 209 33.5
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 7.2e-08 62.0 74 37.8


User provided reference genes

Program Settings