Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 2.1e-55 218.8 111 100.0
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 5.1e-25 117.9 105 60.0
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 1.6e-23 112.8 101 61.4
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 1.6e-23 112.8 101 61.4
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 8.2e-23 110.5 103 59.2
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 1.1e-22 110.2 101 59.4
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 1.8e-22 109.4 106 54.7
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 4.0e-22 108.2 104 57.7
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 1.2e-21 106.7 100 58.0
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 2.0e-21 105.9 104 56.7
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 2.6e-21 105.5 108 56.5
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 3.4e-21 105.1 102 55.9
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 7.6e-21 104.0 100 58.0
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 1.3e-20 103.2 108 53.7
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 1.7e-20 102.8 108 56.5
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 1.7e-20 102.8 98 57.1
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 2.9e-20 102.1 97 56.7
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 4.9e-20 101.3 103 53.4
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 4.9e-20 101.3 97 49.5
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 1.4e-19 99.8 109 56.0
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 1.4e-19 99.8 108 54.6
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 1.9e-19 99.4 108 54.6
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 1.9e-19 99.4 103 52.4
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 2.5e-19 99.0 101 53.5
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 2.5e-19 99.0 108 54.6
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 4.2e-19 98.2 97 54.6
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 4.2e-19 98.2 92 58.7
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 7.1e-19 97.4 107 53.3
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 9.3e-19 97.1 122 50.0
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 1.2e-18 96.7 107 54.2
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 1.2e-18 96.7 102 54.9
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 1.2e-18 96.7 116 48.3
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 1.2e-18 96.7 111 52.3
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 2.1e-18 95.9 97 54.6
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 2.1e-18 95.9 104 51.9
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 2.1e-18 95.9 102 53.9
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 2.7e-18 95.5 101 51.5
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 2.7e-18 95.5 106 50.0
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 4.6e-18 94.7 104 51.9
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 4.6e-18 94.7 104 51.9
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 6.0e-18 94.4 100 51.0
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 6.0e-18 94.4 60 70.0
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 7.9e-18 94.0 103 53.4
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 1.8e-17 92.8 104 52.9
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 2.3e-17 92.4 106 51.9
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 2.3e-17 92.4 109 49.5
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 3.9e-17 91.7 99 50.5
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 3.9e-17 91.7 99 50.5
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 3.9e-17 91.7 95 52.6
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 5.1e-17 91.3 105 52.4
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 6.7e-17 90.9 51 78.4
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 6.7e-17 90.9 102 52.9
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 8.7e-17 90.5 108 48.1
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 8.7e-17 90.5 60 66.7
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 1.5e-16 89.7 104 51.9
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 1.5e-16 89.7 97 53.6
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 1.9e-16 89.4 105 48.6
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 1.9e-16 89.4 105 51.4
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 2.5e-16 89.0 100 52.0
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 7.4e-16 87.4 83 54.2
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 9.7e-16 87.0 90 54.4
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 1.3e-15 86.7 99 48.5
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 1.6e-15 86.3 108 50.0
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 2.2e-15 85.9 88 54.5
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 3.7e-15 85.1 58 69.0
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 4.8e-15 84.7 60 71.7
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 8.2e-15 84.0 99 48.5
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 8.2e-15 84.0 58 69.0
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 8.2e-15 84.0 105 47.6
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 1.1e-14 83.6 95 51.6
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 1.4e-14 83.2 83 56.6
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 1.4e-14 83.2 115 44.3
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 1.8e-14 82.8 107 47.7
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 2.4e-14 82.4 58 67.2
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 6.9e-14 80.9 101 49.5
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 1.2e-13 80.1 109 45.0
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 1.2e-13 80.1 90 52.2
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 2.6e-13 79.0 102 49.0
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 2.6e-13 79.0 97 44.3
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 3.4e-13 78.6 77 54.5
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 4.5e-13 78.2 109 44.0
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 1.7e-12 76.3 100 47.0
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 2.2e-12 75.9 88 44.3
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 6.5e-12 74.3 83 48.2
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 1.1e-11 73.6 84 48.8
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 1.9e-11 72.8 63 61.9
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 2.5e-11 72.4 83 48.2
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 2.5e-11 72.4 47 66.0
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 2.5e-11 72.4 66 54.5
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 3.2e-11 72.0 71 52.1
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 4.2e-11 71.6 59 64.4
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 5.5e-11 71.2 82 48.8
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 2.1e-10 69.3 82 46.3
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 2.1e-10 69.3 91 46.2
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 3.6e-10 68.6 93 48.4
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 3.6e-10 68.6 87 46.0
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 4.6e-10 68.2 82 45.1
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 2.5e-08 62.4 81 48.1


User provided reference genes

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