Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041591.1 Olea europaea HOM05D007939 ORTHO05D010027 2.7e-25 117.9 59 100.0
Nn3g17057 Nelumbo nucifera HOM05D007939 ORTHO05D010027 1.2e-17 92.4 55 83.6
Nn4g22962 Nelumbo nucifera HOM05D007939 ORTHO05D010027 2.7e-17 91.3 55 81.8
Migut.D01894 Erythranthe guttata HOM05D007939 ORTHO05D010027 1.4e-16 89.0 59 76.3
Manes.14G071800 Manihot esculenta HOM05D007939 ORTHO05D010027 2.3e-16 88.2 57 75.4
Cfa019042 Carpinus fangiana HOM05D007939 ORTHO05D010027 6.7e-16 86.7 55 76.4
Ciclev10023252m.g Citrus clementina HOM05D007939 ORTHO05D010027 6.7e-16 86.7 57 75.4
CiPaw.11G033900 Carya illinoinensis HOM05D007939 ORTHO05D010027 8.8e-16 86.3 52 80.8
Glyma.05G032500 Glycine max HOM05D007939 ORTHO05D010027 1.1e-15 85.9 55 78.2
Sed0024093 Sechium edule HOM05D007939 ORTHO05D010027 1.9e-15 85.1 46 89.1
Cc04_g16150 Coffea canephora HOM05D007939 ORTHO05D010027 2.5e-15 84.7 54 77.8
CsaV3_1G008140 Cucumis sativus L. HOM05D007939 ORTHO05D010027 2.5e-15 84.7 58 74.1
Gohir.A12G276700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 2.5e-15 84.7 57 71.9
Gohir.D12G277700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 2.5e-15 84.7 57 71.9
Gorai.008G298400 Gossypium raimondii HOM05D007939 ORTHO05D010027 2.5e-15 84.7 57 71.9
Oeu046758.2 Olea europaea HOM05D007939 ORTHO05D010027 2.5e-15 84.7 47 87.2
ClCG01G014170 Citrullus lanatus HOM05D007939 ORTHO05D010027 5.7e-15 83.6 47 87.2
MELO3C002231.2 Cucumis melo HOM05D007939 ORTHO05D010027 5.7e-15 83.6 45 88.9
Hund02701 Selenicereus undatus HOM05D007939 ORTHO05D010027 7.4e-15 83.2 57 73.7
Potri.012G074300 Populus trichocarpa HOM05D007939 ORTHO05D010027 1.3e-14 82.4 57 70.2
BcaB01g00871 Brassica carinata HOM05D007939 ORTHO05D010027 1.7e-14 82.0 50 78.0
C03p72070 Brassica napus HOM05D007939 ORTHO05D010027 1.7e-14 82.0 50 78.0
BolC3t19505H Brassica oleracea HOM05D007939 ORTHO05D010027 1.7e-14 82.0 50 78.0
BraA06t25058Z Brassica rapa HOM05D007939 ORTHO05D010027 1.7e-14 82.0 50 78.0
DCAR_021553 Daucus carota HOM05D007939 ORTHO05D010027 1.7e-14 82.0 59 69.5
SGA_v2.0_scaffold7G04104 Striga asiatica HOM05D007939 ORTHO05D010027 1.7e-14 82.0 43 88.4
Lj4g0008013 Lotus japonicus HOM05D007939 ORTHO05D010027 2.2e-14 81.6 55 70.9
MD14G1189000 Malus domestica HOM05D007939 ORTHO05D010027 2.2e-14 81.6 57 66.7
Solyc06g071260.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 2.2e-14 81.6 59 72.9
CSS0005245 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 2.8e-14 81.3 47 83.0
CARHR156540 Cardamine hirsuta HOM05D007939 ORTHO05D010027 2.8e-14 81.3 55 72.7
Thhalv10010893m.g Eutrema salsugineum HOM05D007939 ORTHO05D010027 2.8e-14 81.3 50 78.0
PGSC0003DMG400033058 Solanum tuberosum HOM05D007939 ORTHO05D010027 2.8e-14 81.3 59 72.9
Phvul.003G196000 Phaseolus vulgaris HOM05D007939 ORTHO05D010027 3.7e-14 80.9 55 74.5
Thecc.03G001700 Theobroma cacao HOM05D007939 ORTHO05D010027 3.7e-14 80.9 58 70.7
SalBow3G2524 Salvia bowleyana HOM05D007939 ORTHO05D010027 4.8e-14 80.5 51 70.6
Lj9A455T57 Lonicera japonica HOM05D007939 ORTHO05D010027 6.3e-14 80.1 56 71.4
Prupe.5G181400 Prunus persica HOM05D007939 ORTHO05D010027 6.3e-14 80.1 55 70.9
Rhsim12G0160700 Rhododendron simsii HOM05D007939 ORTHO05D010027 6.3e-14 80.1 45 84.4
CSS0025662 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 8.2e-14 79.7 47 80.9
Sp5g14120 Schrenkiella parvula HOM05D007939 ORTHO05D010027 1.1e-13 79.3 50 76.0
Aa31LG4G16500 Aethionema arabicum HOM05D007939 ORTHO05D010027 2.4e-13 78.2 45 82.2
AL5G27140 Arabidopsis lyrata HOM05D007939 ORTHO05D010027 2.4e-13 78.2 50 74.0
BcaC01g01771 Brassica carinata HOM05D007939 ORTHO05D010027 4.1e-13 77.4 40 87.5
COL.COLO4_05795 Corchorus olitorius HOM05D007939 ORTHO05D010027 4.1e-13 77.4 45 80.0
HanXRQChr09g0271581 Helianthus annuus HOM05D007939 ORTHO05D010027 4.1e-13 77.4 56 71.4
Lalb_Chr13g0298021 Lupinus albus HOM05D007939 ORTHO05D010027 4.1e-13 77.4 55 69.1
BcaB02g10687 Brassica carinata HOM05D007939 ORTHO05D010027 5.3e-13 77.0 45 80.0
Haze_07419 Corylus avellana HOM05D007939 ORTHO05D010027 5.3e-13 77.0 48 75.0
Rhsim08G0164200 Rhododendron simsii HOM05D007939 ORTHO05D010027 9.1e-13 76.3 46 76.1
C03p66950 Brassica napus HOM05D007939 ORTHO05D010027 1.2e-12 75.9 48 77.1
RcHm_v2.0_Chr7g0179931 Rosa chinensis HOM05D007939 ORTHO05D010027 1.2e-12 75.9 48 72.9
Solyc03g113670.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 2.0e-12 75.1 51 66.7
CAN.G853.35 Capsicum annuum HOM05D007939 ORTHO05D010027 2.6e-12 74.7 47 72.3
Sabra12G0052700 Salix brachista HOM05D007939 ORTHO05D010027 2.6e-12 74.7 52 71.2
BolC3t18968H Brassica oleracea HOM05D007939 ORTHO05D010027 3.4e-12 74.3 47 76.6
Carub.0005s1396 Capsella rubella HOM05D007939 ORTHO05D010027 4.5e-12 73.9 55 67.3
ATR0712G037 Amborella trichopoda HOM05D007939 ORTHO05D010027 5.9e-12 73.6 41 87.8
Sabra15G0093500 Salix brachista HOM05D007939 ORTHO05D010027 5.9e-12 73.6 45 75.6
Nitab4.5_0000642g0220 Nicotiana tabacum HOM05D007939 ORTHO05D010027 7.7e-12 73.2 50 68.0
Peaxi162Scf00017g02235 Petunia axillaris HOM05D007939 ORTHO05D010027 7.7e-12 73.2 52 65.4
CAN.G628.63 Capsicum annuum HOM05D007939 ORTHO05D010027 1.0e-11 72.8 50 74.0
Medtr4g107140 Medicago truncatula HOM05D007939 ORTHO05D010027 1.3e-11 72.4 45 73.3
Atru.chr9.2381 Acer truncatum HOM05D007939 ORTHO05D010027 1.7e-11 72.0 57 63.2
unitig_21.g20455 Utricularia gibba HOM05D002627 ORTHO05D010027 1.7e-11 72.0 59 64.4
Nitab4.5_0002875g0050 Nicotiana tabacum HOM05D007939 ORTHO05D010027 2.2e-11 71.6 45 71.1
Nitab4.5_0000003g0340 Nicotiana tabacum HOM05D007939 ORTHO05D010027 2.9e-11 71.2 53 67.9
EL10Ac5g10844 Beta vulgaris HOM05D007939 ORTHO05D010027 5.0e-11 70.5 48 70.8
PSO591G0029 Papaver somniferum HOM05D007939 ORTHO05D010027 5.0e-11 70.5 52 69.2
EL10Ac5g10864 Beta vulgaris HOM05D007939 ORTHO05D010027 6.5e-11 70.1 45 75.6
Os03g0824500 Oryza sativa ssp. japonica HOM05D007939 ORTHO05D010027 6.5e-11 70.1 43 81.4
Nitab4.5_0002101g0080 Nicotiana tabacum HOM05D007939 ORTHO05D010027 1.1e-10 69.3 53 66.0
Lsat_1_v5_gn_4_74421 Lactuca sativa HOM05D007939 ORTHO05D010027 1.4e-10 68.9 57 63.2
EL10Ac5g11334 Beta vulgaris HOM05D007939 ORTHO05D010027 2.5e-10 68.2 45 73.3
Zm00001eb302590 Zea mays HOM05D007939 ORTHO05D010027 3.2e-10 67.8 52 65.4
Zm00001eb151290 Zea mays HOM05D007939 ORTHO05D010027 1.8e-08 62.0 39 74.4
Zm00001eb123900 Zea mays HOM05D007939 ORTHO05D010027 3.0e-08 61.2 39 71.8
Peaxi162Scf00689g00418 Petunia axillaris HOM05D007939 ORTHO05D010027 6.7e-08 60.1 56 58.9
QL10p013938 Quercus lobata HOM05D007939 ORTHO05D010027 5.7e-07 57.0 36 66.7


User provided reference genes

Program Settings