Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 7.2e-161 570.5 278 100.0
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 3.8e-85 318.9 206 71.4
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 1.1e-84 317.4 212 72.2
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 1.9e-84 316.6 207 75.4
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 6.9e-79 298.1 213 71.4
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 9.0e-79 297.7 206 69.4
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 2.0e-78 296.6 212 68.9
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 2.9e-77 292.7 215 68.4
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 2.9e-77 292.7 208 73.1
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 3.8e-77 292.4 213 69.5
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 1.4e-76 290.4 210 66.2
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 1.9e-76 290.0 215 70.7
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 2.5e-76 289.7 210 67.6
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 7.1e-76 288.1 202 68.8
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 7.1e-76 288.1 199 73.4
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 1.2e-75 287.3 210 68.1
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 1.6e-75 287.0 213 70.0
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 2.1e-75 286.6 220 65.9
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 6.0e-75 285.0 209 68.4
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 1.0e-74 284.3 199 73.4
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 1.3e-74 283.9 175 76.0
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 3.0e-74 282.7 210 67.6
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.1e-73 280.8 210 69.0
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 1.9e-73 280.0 218 65.6
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 1.9e-73 280.0 197 70.1
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 4.3e-73 278.9 219 65.3
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 7.4e-73 278.1 216 65.3
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 2.8e-72 276.2 216 65.7
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 2.8e-72 276.2 208 68.3
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 3.7e-72 275.8 211 64.5
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 8.2e-72 274.6 212 65.1
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 8.2e-72 274.6 212 65.1
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 1.1e-71 274.2 187 71.1
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.8e-71 273.5 228 62.7
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 1.8e-71 273.5 215 65.6
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 1.8e-71 273.5 208 64.4
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 2.4e-71 273.1 221 63.3
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 5.3e-71 271.9 213 63.4
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 1.2e-70 270.8 238 56.3
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 1.5e-70 270.4 166 74.1
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 3.4e-70 269.2 161 76.4
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 4.5e-70 268.9 177 70.1
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 4.5e-70 268.9 172 73.3
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 7.7e-70 268.1 219 62.6
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 7.7e-70 268.1 217 63.6
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 1.3e-69 267.3 166 74.1
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 1.7e-69 266.9 201 67.2
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 3.8e-69 265.8 211 62.6
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 5.0e-69 265.4 211 62.6
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 6.5e-69 265.0 220 61.8
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 8.5e-69 264.6 194 70.6
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 1.1e-68 264.2 199 64.3
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 2.5e-68 263.1 209 63.2
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 2.5e-68 263.1 173 72.3
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 3.2e-68 262.7 174 73.0
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 5.5e-68 261.9 182 68.7
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 7.2e-68 261.5 211 64.5
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 9.4e-68 261.2 178 71.3
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 4.6e-67 258.8 167 71.9
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 1.8e-66 256.9 154 76.6
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 1.8e-66 256.9 262 54.6
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.8e-66 256.9 160 75.0
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 3.0e-66 256.1 155 76.1
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 3.0e-66 256.1 207 61.4
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 8.8e-66 254.6 222 59.5
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 1.1e-65 254.2 167 71.3
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 1.1e-65 254.2 154 77.3
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 1.5e-65 253.8 194 63.4
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 5.7e-65 251.9 208 62.5
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 5.7e-65 251.9 210 61.4
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 1.7e-64 250.4 167 71.3
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 2.8e-64 249.6 164 69.5
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 3.7e-64 249.2 193 64.2
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 4.8e-64 248.8 177 65.5
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 2.4e-63 246.5 157 75.8
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 3.1e-63 246.1 160 71.2
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 4.1e-63 245.7 165 69.1
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 6.9e-63 245.0 166 67.5
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 9.1e-63 244.6 164 68.9
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 9.1e-63 244.6 164 68.9
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 1.2e-62 244.2 191 62.8
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 2.0e-62 243.4 160 70.6
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 4.5e-62 242.3 164 67.7
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 1.3e-61 240.7 164 66.5
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.3e-61 240.7 221 59.3
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 2.9e-61 239.6 160 69.4
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.1e-60 237.7 183 65.6
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 5.5e-60 235.3 136 75.0
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 1.2e-59 234.2 166 66.3
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 2.1e-59 233.4 209 55.0
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 7.9e-59 231.5 162 70.4
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 1.8e-58 230.3 130 77.7
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 3.0e-58 229.6 175 64.0
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 5.1e-58 228.8 187 62.0
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 1.1e-57 227.6 160 66.9
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 2.6e-57 226.5 153 72.5
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 1.7e-56 223.8 132 75.8
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 3.7e-56 222.6 125 80.0
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 1.4e-55 220.7 145 69.7
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 1.2e-54 217.6 174 63.8
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 5.0e-53 212.2 131 78.6
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 3.0e-50 203.0 140 65.0
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 6.7e-50 201.8 173 57.8
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 4.4e-49 199.1 127 73.2
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 8.2e-48 194.9 193 54.4
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 2.0e-46 190.3 159 53.5
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 5.0e-45 185.7 131 65.6
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.9e-44 183.7 153 61.4
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.9e-44 183.7 153 61.4
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 1.2e-41 174.5 111 68.5
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 2.8e-40 169.9 133 62.4
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 6.3e-40 168.7 185 48.1
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 1.8e-34 150.6 89 83.1
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 3.4e-33 146.4 93 75.3
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 3.7e-32 142.9 133 50.4
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 6.3e-32 142.1 134 53.0
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 1.1e-31 141.4 158 44.3
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.6e-30 137.5 141 53.9
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 2.7e-30 136.7 82 78.0
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 4.5e-30 136.0 128 46.1
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 7.5e-25 118.6 132 49.2
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 4.9e-16 89.4 114 35.1
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 5.8e-09 65.9 38 73.7
Oeu016347.1 Olea europaea HOM05D006272 ORTHO05D288967 2.1e-06 57.4 29 93.1
vmacro22872 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 4.6e-06 56.2 36 69.4


User provided reference genes

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