Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 1.4e-51 206.1 109 100.0
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 1.3e-36 156.4 104 81.7
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 1.3e-36 156.4 106 75.5
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 2.2e-36 155.6 107 72.9
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 2.0e-34 149.1 110 73.6
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 2.2e-33 145.6 109 72.5
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.1e-32 143.3 107 72.9
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.1e-32 143.3 109 73.4
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 1.1e-32 143.3 107 72.9
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.5e-32 142.9 129 62.8
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 5.5e-32 141.0 107 72.0
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 5.5e-32 141.0 103 72.8
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 4.7e-31 137.9 107 66.4
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 4.7e-31 137.9 107 66.4
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 6.1e-31 137.5 107 63.6
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 6.1e-31 137.5 107 68.2
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 8.0e-31 137.1 107 66.4
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 2.3e-30 135.6 107 65.4
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 3.0e-30 135.2 106 65.1
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 5.2e-30 134.4 101 70.3
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 6.8e-30 134.0 109 68.8
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 1.2e-29 133.3 107 66.4
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 3.4e-29 131.7 106 64.2
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 4.4e-29 131.3 110 67.3
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 9.8e-29 130.2 107 70.1
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 1.7e-28 129.4 131 57.3
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 2.8e-28 128.6 109 60.6
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 2.8e-28 128.6 107 64.5
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 8.3e-28 127.1 108 63.9
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 1.4e-27 126.3 109 61.5
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 2.4e-27 125.6 108 63.9
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 2.4e-27 125.6 108 63.9
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 2.4e-27 125.6 111 64.0
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 3.1e-27 125.2 103 61.2
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 3.1e-27 125.2 101 62.4
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 3.1e-27 125.2 99 62.6
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 4.1e-27 124.8 110 63.6
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 4.1e-27 124.8 108 64.8
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 4.1e-27 124.8 78 82.1
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 4.1e-27 124.8 78 82.1
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 7.0e-27 124.0 106 64.2
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.6e-26 122.9 107 64.5
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 1.6e-26 122.9 107 59.8
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.6e-26 122.9 139 53.2
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 2.0e-26 122.5 114 60.5
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 2.7e-26 122.1 107 62.6
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 3.5e-26 121.7 107 61.7
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 4.5e-26 121.3 108 60.2
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 7.7e-26 120.6 108 59.3
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 7.7e-26 120.6 98 65.3
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.0e-25 120.2 113 60.2
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.0e-25 120.2 107 59.8
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.3e-25 119.8 107 63.6
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 5.0e-25 117.9 115 57.4
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 5.0e-25 117.9 112 58.9
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 6.5e-25 117.5 115 57.4
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 6.5e-25 117.5 104 61.5
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 1.1e-24 116.7 106 60.4
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 1.1e-24 116.7 84 70.2
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 2.5e-24 115.5 76 77.6
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 3.3e-24 115.2 111 58.6
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 5.5e-24 114.4 105 64.8
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 7.2e-24 114.0 91 63.7
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 1.2e-23 113.2 114 57.9
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 1.2e-23 113.2 108 58.3
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 2.8e-23 112.1 99 64.6
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 2.8e-23 112.1 108 60.2
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 2.8e-23 112.1 108 60.2
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 4.7e-23 111.3 100 62.0
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 6.1e-23 110.9 98 59.2
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 6.1e-23 110.9 108 59.3
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 6.1e-23 110.9 107 55.1
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 8.0e-23 110.5 108 59.3
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 8.0e-23 110.5 108 59.3
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 1.0e-22 110.2 107 55.1
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.4e-22 109.8 99 60.6
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 3.0e-22 108.6 107 59.8
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 6.8e-22 107.5 77 67.5
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 6.8e-22 107.5 77 67.5
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 7.5e-21 104.0 98 57.1
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 9.8e-21 103.6 97 55.7
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 9.8e-21 103.6 106 50.0
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 9.8e-21 103.6 98 60.2
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 1.7e-20 102.8 108 52.8
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 1.7e-20 102.8 108 52.8
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 1.7e-20 102.8 108 52.8
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 2.2e-20 102.4 107 49.5
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 2.8e-20 102.1 107 49.5
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.8e-20 102.1 107 55.1
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 3.7e-20 101.7 113 52.2
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 3.7e-20 101.7 112 55.4
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 3.7e-20 101.7 107 51.4
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 3.7e-20 101.7 107 48.6
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 3.7e-20 101.7 107 51.4
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 4.9e-20 101.3 107 51.4
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 4.9e-20 101.3 107 48.6
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 4.9e-20 101.3 120 55.8
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 1.4e-19 99.8 108 51.9
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 4.1e-19 98.2 107 54.2
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 1.6e-18 96.3 110 50.9
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 5.9e-18 94.4 107 53.3
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 1.0e-17 93.6 81 60.5
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.7e-17 92.8 107 52.3
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 3.8e-17 91.7 73 61.6
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 3.3e-16 88.6 110 48.2
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 6.8e-14 80.9 70 57.1
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 6.8e-14 80.9 107 46.7
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.1e-11 73.6 77 54.5
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 2.5e-08 62.4 119 39.5


User provided reference genes

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