Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 9.2e-71 270.0 127 100.0
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 5.4e-55 217.6 127 81.1
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 5.4e-55 217.6 125 82.4
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 2.7e-54 215.3 127 81.1
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.7e-54 215.3 126 81.7
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 7.8e-54 213.8 127 81.9
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 1.0e-53 213.4 127 79.5
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 1.3e-53 213.0 127 79.5
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.3e-53 213.0 127 78.7
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 3.9e-53 211.5 127 81.9
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 8.7e-53 210.3 127 77.2
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 8.7e-53 210.3 126 81.0
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 1.1e-52 209.9 127 77.2
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 1.5e-52 209.5 127 78.0
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 1.5e-52 209.5 127 79.5
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 1.9e-52 209.1 126 80.2
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 1.9e-52 209.1 126 81.0
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.5e-52 208.8 127 77.2
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 2.5e-52 208.8 127 81.1
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 2.5e-52 208.8 126 80.2
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 4.3e-52 208.0 127 78.0
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 4.3e-52 208.0 126 80.2
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 4.3e-52 208.0 126 80.2
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 7.3e-52 207.2 127 78.0
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 9.6e-52 206.8 127 77.2
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 9.6e-52 206.8 127 80.3
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 9.6e-52 206.8 126 81.7
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 1.6e-51 206.1 127 77.2
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 1.6e-51 206.1 127 77.2
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 1.6e-51 206.1 127 77.2
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 2.8e-51 205.3 127 78.0
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 3.6e-51 204.9 127 77.2
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 8.1e-51 203.8 127 77.2
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 8.1e-51 203.8 127 75.6
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 1.4e-50 203.0 127 76.4
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 1.4e-50 203.0 132 74.2
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 1.4e-50 203.0 128 77.3
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.8e-50 202.6 127 74.8
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 3.1e-50 201.8 127 74.8
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 3.1e-50 201.8 127 76.4
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 5.2e-50 201.1 127 74.8
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 9.0e-50 200.3 127 76.4
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 9.0e-50 200.3 127 77.2
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 1.2e-49 199.9 127 76.4
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 2.0e-49 199.1 127 76.4
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 2.0e-49 199.1 125 76.0
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 2.6e-49 198.7 127 74.0
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 2.6e-49 198.7 125 76.0
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 3.4e-49 198.4 125 75.2
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 5.8e-49 197.6 130 76.9
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.6e-49 197.2 129 77.5
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.6e-49 197.2 129 77.5
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.6e-49 197.2 129 77.5
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 2.9e-48 195.3 128 76.6
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 2.9e-48 195.3 130 74.6
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 2.9e-48 195.3 126 72.2
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.8e-48 194.9 129 76.7
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 1.1e-47 193.4 129 76.7
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 1.1e-47 193.4 123 74.0
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 7.1e-47 190.7 127 74.8
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 4.6e-46 188.0 132 70.5
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 7.8e-46 187.2 132 68.2
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 2.3e-45 185.7 125 73.6
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 3.0e-45 185.3 101 87.1
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 3.9e-45 184.9 98 85.7
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 5.1e-45 184.5 127 70.9
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 6.6e-45 184.1 132 68.9
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 2.5e-44 182.2 123 70.7
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 2.5e-44 182.2 122 71.3
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 3.3e-44 181.8 123 70.7
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 3.3e-44 181.8 123 70.7
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 3.3e-44 181.8 123 70.7
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 3.3e-44 181.8 123 70.7
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 3.3e-44 181.8 123 70.7
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 7.3e-44 180.6 123 69.9
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 7.3e-44 180.6 123 69.9
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 9.6e-44 180.3 123 69.9
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 1.3e-43 179.9 125 68.0
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.6e-43 179.5 123 69.1
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 3.6e-43 178.3 123 69.1
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 3.6e-43 178.3 123 69.1
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 6.2e-43 177.6 130 68.5
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 8.1e-43 177.2 123 68.3
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 8.1e-43 177.2 123 68.3
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 8.1e-43 177.2 123 68.3
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 8.1e-43 177.2 92 88.0
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 2.4e-42 175.6 123 69.1
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 3.4e-41 171.8 102 77.5
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 5.8e-41 171.0 93 86.0
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 1.3e-40 169.9 92 83.7
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 6.4e-40 167.5 87 85.1
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 1.1e-39 166.8 125 65.6
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 3.2e-39 165.2 88 84.1
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 6.0e-38 161.0 88 85.2
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 1.0e-37 160.2 88 84.1
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 8.7e-37 157.1 122 62.3
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 2.5e-36 155.6 93 78.5
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 3.3e-36 155.2 88 77.3
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 3.3e-36 155.2 77 89.6
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 4.3e-36 154.8 98 75.5
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 7.4e-36 154.1 88 79.5
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 7.4e-36 154.1 100 74.0
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 1.6e-35 152.9 122 61.5
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 2.8e-35 152.1 93 78.5
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 2.8e-35 152.1 93 78.5
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 4.8e-35 151.4 88 78.4
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 1.1e-34 150.2 90 78.9
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 3.1e-34 148.7 100 70.0
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 3.1e-34 148.7 93 74.2
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 6.9e-34 147.5 74 90.5
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 1.1e-31 140.2 122 59.8
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 1.1e-31 140.2 122 59.8
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 4.2e-31 138.3 91 70.3
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 9.6e-28 127.1 105 63.8
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 3.7e-27 125.2 88 64.8
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 1.8e-21 106.3 72 69.4
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 9.7e-20 100.5 54 81.5
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 8.5e-16 87.4 127 44.1
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 4.2e-15 85.1 111 40.5
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 3.6e-14 82.0 122 37.7
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 1.0e-13 80.5 85 44.7
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 1.4e-13 80.1 153 36.6
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 3.1e-10 68.9 33 93.9
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 4.5e-09 65.1 30 86.7
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 1.1e-07 60.5 31 87.1


User provided reference genes

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