Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 5.0e-64 247.7 130 100.0
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 8.8e-61 236.9 130 96.2
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 4.0e-29 131.7 134 55.2
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 9.2e-26 120.6 131 51.9
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 1.6e-25 119.8 131 54.2
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 1.6e-25 119.8 130 50.8
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 6.0e-25 117.9 129 49.6
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 3.3e-23 112.1 147 49.7
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 3.3e-23 112.1 131 48.9
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 5.6e-23 111.3 132 50.0
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 1.2e-22 110.2 136 48.5
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 1.8e-21 106.3 137 49.6
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 2.4e-21 105.9 133 48.9
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 5.2e-21 104.8 140 50.7
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 5.2e-21 104.8 132 47.7
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 8.9e-21 104.0 139 48.9
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 1.2e-20 103.6 128 47.7
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.2e-20 103.6 125 51.2
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.5e-20 103.2 163 44.2
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 2.6e-20 102.4 128 48.4
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 2.6e-20 102.4 122 54.1
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 4.4e-20 101.7 132 48.5
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 9.9e-20 100.5 131 45.8
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 9.9e-20 100.5 56 94.6
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 2.2e-19 99.4 133 47.4
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 3.8e-19 98.6 130 51.5
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 3.8e-19 98.6 126 49.2
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 8.4e-19 97.4 130 50.0
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 8.4e-19 97.4 131 42.7
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 1.4e-18 96.7 127 52.0
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 1.4e-18 96.7 127 52.0
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 1.4e-18 96.7 125 48.0
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 1.9e-18 96.3 130 50.0
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 1.9e-18 96.3 125 51.2
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 4.2e-18 95.1 126 50.0
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 4.2e-18 95.1 126 50.0
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.2e-18 95.1 132 47.0
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 5.4e-18 94.7 126 50.0
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 7.1e-18 94.4 126 45.2
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 7.1e-18 94.4 129 48.8
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 9.2e-18 94.0 132 47.0
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 1.6e-17 93.2 126 46.8
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.6e-17 93.2 132 44.7
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 1.6e-17 93.2 125 48.0
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.6e-17 93.2 121 48.8
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 2.7e-17 92.4 137 44.5
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 4.6e-17 91.7 114 49.1
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 4.6e-17 91.7 127 47.2
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 6.0e-17 91.3 115 47.8
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 7.8e-17 90.9 127 44.9
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 1.0e-16 90.5 132 44.7
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 1.7e-16 89.7 130 40.8
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 1.7e-16 89.7 115 47.0
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 1.7e-16 89.7 115 48.7
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 1.7e-16 89.7 129 48.1
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 3.9e-16 88.6 138 41.3
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 3.9e-16 88.6 133 42.1
SalBow5G1753 Salvia bowleyana HOM05D006100 ORTHO05D007539 3.9e-16 88.6 108 48.1
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 5.1e-16 88.2 128 47.7
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 6.6e-16 87.8 128 43.8
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 8.7e-16 87.4 103 49.5
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 8.7e-16 87.4 131 48.9
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 8.7e-16 87.4 96 58.3
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 1.1e-15 87.0 137 46.7
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.5e-15 86.7 82 63.4
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 1.9e-15 86.3 130 45.4
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 1.9e-15 86.3 130 45.4
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 1.9e-15 86.3 128 43.8
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 4.3e-15 85.1 128 44.5
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 4.3e-15 85.1 134 42.5
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 7.3e-15 84.3 138 43.5
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 9.6e-15 84.0 61 70.5
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 1.6e-14 83.2 58 72.4
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 2.1e-14 82.8 101 48.5
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 2.8e-14 82.4 130 46.9
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 3.6e-14 82.0 83 51.8
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 3.6e-14 82.0 128 43.8
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 4.8e-14 81.6 74 62.2
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.8e-14 81.6 58 67.2
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 6.2e-14 81.3 138 39.1
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 6.2e-14 81.3 125 40.8
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 8.1e-14 80.9 104 47.1
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 8.1e-14 80.9 80 56.2
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 8.1e-14 80.9 110 47.3
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 1.4e-13 80.1 70 62.9
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 1.4e-13 80.1 139 42.4
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 1.4e-13 80.1 125 40.8
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.4e-13 80.1 125 40.8
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 2.4e-13 79.3 93 50.5
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 3.1e-13 79.0 86 54.7
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 4.0e-13 78.6 92 53.3
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 5.3e-13 78.2 124 42.7
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 6.9e-13 77.8 77 50.6
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 6.9e-13 77.8 72 59.7
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 9.0e-13 77.4 99 49.5
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 1.5e-12 76.6 97 47.4
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.0e-12 76.3 61 65.6
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 2.0e-12 76.3 125 41.6
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 2.0e-12 76.3 115 41.7
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 1.3e-11 73.6 153 39.9
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 1.7e-11 73.2 125 37.6
Lsat_1_v5_gn_3_76280 Lactuca sativa HOM05D006100 ORTHO05D007539 2.2e-11 72.8 132 40.2
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 2.9e-11 72.4 91 49.5
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 6.4e-11 71.2 73 57.5
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 1.1e-10 70.5 76 53.9
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 1.9e-10 69.7 57 66.7
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.2e-10 68.9 77 54.5
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 5.4e-10 68.2 125 43.2
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 5.4e-10 68.2 104 45.2
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 2.1e-09 66.2 109 37.6
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 2.7e-09 65.9 82 46.3
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 3.5e-09 65.5 112 44.6
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 7.8e-09 64.3 117 38.5
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.0e-08 63.9 136 33.1
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.0e-08 63.9 139 37.4
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 3.0e-08 62.4 92 47.8
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 6.6e-08 61.2 75 48.0
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 1.1e-07 60.5 64 54.7
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 2.5e-07 59.3 111 39.6
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 4.3e-07 58.5 77 44.2
MSTRG.15273 Avicennia marina HOM05D006100 ORTHO05D007539 2.1e-06 56.2 83 43.4


User provided reference genes

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