Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041416.1 Olea europaea HOM05D003795 ORTHO05D004308 3.9e-299 1030.8 553 100.0
Oeu012502.2 Olea europaea HOM05D003795 ORTHO05D004308 7.5e-109 398.7 610 47.7
Dinv28269 Davidia involucrata HOM05D003795 ORTHO05D004308 8.3e-108 395.2 685 45.1
PGSC0003DMG400019727 Solanum tuberosum HOM05D003795 ORTHO05D004308 1.3e-105 387.9 693 44.6
Nitab4.5_0012787g0030 Nicotiana tabacum HOM05D003795 ORTHO05D004308 3.7e-100 369.8 682 44.0
CAN.G809.93 Capsicum annuum HOM05D003795 ORTHO05D004308 4.1e-99 366.3 681 43.5
Nitab4.5_0000483g0170 Nicotiana tabacum HOM05D003795 ORTHO05D004308 1.3e-97 361.3 685 44.1
Sopen02g026080 Solanum pennellii HOM05D003795 ORTHO05D004308 2.8e-95 353.6 698 42.0
Cc07_g12620 Coffea canephora HOM05D003795 ORTHO05D004308 3.0e-94 350.1 687 42.5
Solyc02g081440.4 Solanum lycopersicum HOM05D003795 ORTHO05D004308 4.4e-93 346.3 701 41.1
Peaxi162Scf00344g00199 Petunia axillaris HOM05D003795 ORTHO05D004308 1.4e-91 341.3 679 43.3
Oeu060824.1 Olea europaea HOM05D003795 ORTHO05D004308 1.4e-86 324.7 680 41.2
Lj2A509T28 Lonicera japonica HOM05D003795 ORTHO05D004308 1.5e-85 321.2 694 40.5
CSS0049356 Camellia sinensis var. sinensis HOM05D003795 ORTHO05D004308 2.4e-83 313.9 693 42.0
Duzib138G1939 Durio zibethinus HOM05D003795 ORTHO05D004308 5.2e-78 296.2 712 39.3
Sabra12G0109200 Salix brachista HOM05D003795 ORTHO05D004308 1.5e-77 294.7 627 41.5
Potri.012G145200 Populus trichocarpa HOM05D003795 ORTHO05D004308 1.9e-75 287.7 752 38.4
MSTRG.15619 Avicennia marina HOM05D003795 ORTHO05D004308 1.6e-74 284.6 663 40.9
Manes.01G125700 Manihot esculenta HOM05D003795 ORTHO05D004308 7.8e-74 282.3 715 39.0
GSVIVG01033197001 Vitis vinifera HOM05D003795 ORTHO05D004308 1.7e-73 281.2 603 42.5
QL02p056567 Quercus lobata HOM05D003795 ORTHO05D004308 1.9e-72 277.7 605 40.7
DCAR_014135 Daucus carota HOM05D003795 ORTHO05D004308 1.2e-71 275.0 641 41.2
Hma1.2p1_0085F.1_g043870 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 2.8e-71 273.9 724 38.0
QL02p055515 Quercus lobata HOM05D003795 ORTHO05D004308 1.8e-70 271.2 605 40.3
SalBow5G4136 Salvia bowleyana HOM05D003795 ORTHO05D004308 4.0e-70 270.0 597 41.9
Migut.K01203 Erythranthe guttata HOM05D003795 ORTHO05D004308 6.8e-70 269.2 544 43.4
Gohir.D11G177300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 2.0e-69 267.7 691 39.1
Sabra15G0156700 Salix brachista HOM05D003795 ORTHO05D004308 4.4e-69 266.5 728 36.7
Manes.02G083300 Manihot esculenta HOM05D003795 ORTHO05D004308 9.9e-69 265.4 729 37.2
Gohir.A11G170300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 1.7e-68 264.6 700 38.3
Phvul.008G243000 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 1.2e-66 258.5 669 39.5
Thecc.04G056400 Theobroma cacao HOM05D003795 ORTHO05D004308 2.1e-66 257.7 669 38.3
Gorai.007G189400 Gossypium raimondii HOM05D003795 ORTHO05D004308 3.5e-66 256.9 691 37.9
Peaxi162Scf00784g00029 Petunia axillaris HOM05D003795 ORTHO05D004308 1.0e-65 255.4 599 40.6
Haze_14040 Corylus avellana HOM05D003795 ORTHO05D004308 1.7e-65 254.6 672 37.8
VMungo0647G0124 Vigna mungo HOM05D003795 ORTHO05D004308 2.5e-64 250.8 672 38.5
Cpa.g.sc108.20 Carica papaya HOM05D003795 ORTHO05D004308 9.6e-64 248.8 661 38.1
Nitab4.5_0008083g0010 Nicotiana tabacum HOM05D003795 ORTHO05D004308 2.1e-63 247.7 637 37.5
SGA_v2.0_scaffold199G41250 Striga asiatica HOM05D003795 ORTHO05D004308 8.1e-63 245.7 635 39.8
TWI74G0163 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 1.1e-62 245.4 693 36.5
CiPaw.03G010000 Carya illinoinensis HOM05D003795 ORTHO05D004308 2.4e-62 244.2 738 35.6
Glyma.14G207900 Glycine max HOM05D003795 ORTHO05D004308 1.7e-60 238.0 697 37.0
MSTRG.3665 Avicennia marina HOM05D003795 ORTHO05D004308 2.2e-60 237.7 700 36.7
LjContig00141g0025814 Lotus japonicus HOM05D003795 ORTHO05D004308 2.9e-60 237.3 699 37.9
FvH4_5g39710 Fragaria vesca HOM05D003795 ORTHO05D004308 3.8e-60 236.9 682 36.7
Potri.015G147900 Populus trichocarpa HOM05D003795 ORTHO05D004308 8.4e-60 235.7 733 35.5
FAN08G2134 Fragaria x ananassa HOM05D003795 ORTHO05D004308 1.4e-59 235.0 682 36.7
TWI77G0024 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 7.1e-59 232.6 566 37.6
Glyma.02G239000 Glycine max HOM05D003795 ORTHO05D004308 1.2e-58 231.9 689 36.9
vmacro20445 Vaccinium macrocarpon HOM05D003795 ORTHO05D004308 1.6e-58 231.5 670 36.7
CAN.G304.8 Capsicum annuum HOM05D003795 ORTHO05D004308 2.7e-58 230.7 628 37.4
FAN18G0662 Fragaria x ananassa HOM05D003795 ORTHO05D004308 1.0e-57 228.8 682 37.0
FAN18G1276 Fragaria x ananassa HOM05D003795 ORTHO05D004308 1.0e-57 228.8 682 37.0
HanXRQChr14g0443551 Helianthus annuus HOM05D003795 ORTHO05D004308 7.3e-56 222.6 638 37.0
Nitab4.5_0002297g0070 Nicotiana tabacum HOM05D003795 ORTHO05D004308 9.6e-56 222.2 643 36.5
Rhsim10G0186600 Rhododendron simsii HOM05D003795 ORTHO05D004308 9.6e-56 222.2 666 37.4
Psat2g048640 Pisum sativum HOM05D003795 ORTHO05D004308 4.8e-55 219.9 596 38.3
COL.COLO4_13440 Corchorus olitorius HOM05D003795 ORTHO05D004308 1.8e-54 218.0 558 38.4
Lj6g0018352 Lotus japonicus HOM05D003795 ORTHO05D004308 2.4e-54 217.6 688 35.8
Phvul.006G083400 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 2.4e-54 217.6 713 35.2
FAN04G0804 Fragaria x ananassa HOM05D003795 ORTHO05D004308 3.1e-54 217.2 651 35.5
Glyma.18G048000 Glycine max HOM05D003795 ORTHO05D004308 2.6e-53 214.2 677 35.3
Lsat_1_v5_gn_2_72041 Lactuca sativa HOM05D003795 ORTHO05D004308 2.6e-53 214.2 635 37.2
THA.LOC104805668 Tarenaya hassleriana HOM05D003795 ORTHO05D004308 2.6e-53 214.2 611 36.7
Nn4g24993 Nelumbo nucifera HOM05D003795 ORTHO05D004308 2.2e-52 211.1 618 35.8
RcHm_v2.0_Chr7g0242011 Rosa chinensis HOM05D003795 ORTHO05D004308 3.8e-52 210.3 685 34.2
Nn4g24995 Nelumbo nucifera HOM05D003795 ORTHO05D004308 4.9e-52 209.9 610 35.7
Ciclev10011149m.g Citrus clementina HOM05D003795 ORTHO05D004308 6.4e-52 209.5 740 33.4
Glyma.11G202800 Glycine max HOM05D003795 ORTHO05D004308 6.4e-52 209.5 708 35.2
Medtr3g063210 Medicago truncatula HOM05D003795 ORTHO05D004308 6.4e-52 209.5 627 35.4
unitig_0.g1678 Utricularia gibba HOM05D003795 ORTHO05D004308 6.4e-52 209.5 515 38.1
Hma1.2p1_0034F.1_g021500 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 1.9e-51 208.0 743 32.2
MELO3C025107.2 Cucumis melo HOM05D003795 ORTHO05D004308 7.1e-51 206.1 602 36.7
Sopen02g011820 Solanum pennellii HOM05D003795 ORTHO05D004308 1.2e-50 205.3 622 36.0
unitig_748.g7017 Utricularia gibba HOM05D003795 ORTHO05D004308 1.2e-50 205.3 617 36.0
ECA238G3337 Erigeron canadensis HOM05D003795 ORTHO05D004308 3.0e-49 200.7 633 36.0
CsaV3_5G024360 Cucumis sativus L. HOM05D003795 ORTHO05D004308 2.5e-48 197.6 594 35.2
Psat5g144840 Pisum sativum HOM05D003795 ORTHO05D004308 2.5e-48 197.6 502 38.0
PGSC0003DMG400021472 Solanum tuberosum HOM05D003795 ORTHO05D004308 2.5e-48 197.6 625 37.1
HanXRQChr12g0365641 Helianthus annuus HOM05D003795 ORTHO05D004308 3.3e-48 197.2 612 35.9
VMungo0540G0009 Vigna mungo HOM05D003795 ORTHO05D004308 1.6e-47 194.9 671 34.4
Ca_15099_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 2.8e-47 194.1 655 33.9
ClCG01G008410 Citrullus lanatus HOM05D003795 ORTHO05D004308 4.8e-47 193.4 555 35.5
Sed0021341 Sechium edule HOM05D003795 ORTHO05D004308 8.1e-47 192.6 646 34.4
arahy.Tifrunner.gnm1.ann1.SLU9BZ Arachis hypogaea HOM05D003795 ORTHO05D004308 1.1e-46 192.2 714 32.9
Ca_05735_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 9.0e-46 189.1 610 36.2
Medtr5g076140 Medicago truncatula HOM05D003795 ORTHO05D004308 3.4e-45 187.2 587 35.1
Solyc02g036460.3 Solanum lycopersicum HOM05D003795 ORTHO05D004308 4.5e-45 186.8 634 35.0
Lalb_Chr18g0053951 Lupinus albus HOM05D003795 ORTHO05D004308 9.9e-45 185.7 531 37.5
unitig_748.g8624 Utricularia gibba HOM05D003795 ORTHO05D004308 1.3e-44 185.3 566 37.1
Aa31LG2G10060 Aethionema arabicum HOM05D003795 ORTHO05D004308 2.2e-44 184.5 670 33.0
Ah.04g162800 Amaranthus hybridus HOM05D003795 ORTHO05D004308 2.9e-44 184.1 661 34.2
arahy.Tifrunner.gnm1.ann1.686QXT Arachis hypogaea HOM05D003795 ORTHO05D004308 2.9e-44 184.1 650 33.7
PSO063G2224 Papaver somniferum HOM05D003795 ORTHO05D004308 3.8e-44 183.7 643 34.7
CANSAT78G1023 Cannabis sativa HOM05D003795 ORTHO05D004308 6.4e-44 183.0 579 35.8
Sabra16G0322500 Salix brachista HOM05D003795 ORTHO05D004308 8.4e-44 182.6 338 43.8
Dinv19094 Davidia involucrata HOM05D003795 ORTHO05D004308 3.2e-43 180.6 400 41.8
MBI06_g17214_MAGBIO Magnolia biondii HOM05D003795 ORTHO05D004308 3.2e-43 180.6 559 36.1
TPR.G37433 Trifolium pratense HOM05D003795 ORTHO05D004308 5.5e-43 179.9 647 34.2
Actinidia22883 Actinidia chinensis HOM05D003795 ORTHO05D004308 9.3e-43 179.1 564 37.1
Aqoxy3G04352 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 1.6e-42 178.3 671 32.8
Hund22224 Selenicereus undatus HOM05D003795 ORTHO05D004308 5.1e-41 173.3 661 33.1
TPR.G15394 Trifolium pratense HOM05D003795 ORTHO05D004308 1.5e-40 171.8 586 35.2
PSO782G2347 Papaver somniferum HOM05D003795 ORTHO05D004308 2.1e-39 167.9 639 33.6
Actinidia32996 Actinidia chinensis HOM05D003795 ORTHO05D004308 4.8e-39 166.8 424 37.5
Oeu012503.1 Olea europaea HOM05D003795 ORTHO05D004308 5.3e-38 163.3 276 45.3
TAR629G1700 Trochodendron aralioides HOM05D003795 ORTHO05D004308 6.9e-38 162.9 425 38.8
AT5G37010 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 2.6e-37 161.0 637 32.7
Zm00001eb185660 Zea mays HOM05D003795 ORTHO05D004308 4.5e-37 160.2 522 35.1
Eucgr.J01649 Eucalyptus grandis HOM05D003795 ORTHO05D004308 5.8e-37 159.8 493 35.7
Os04g0528600 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 1.3e-36 158.7 504 34.5
Ah.06g191370 Amaranthus hybridus HOM05D003795 ORTHO05D004308 1.7e-36 158.3 662 31.4
Zm00001eb427110 Zea mays HOM05D003795 ORTHO05D004308 2.9e-36 157.5 585 34.2
PGSC0003DMG402019715 Solanum tuberosum HOM05D003795 ORTHO05D004308 3.8e-36 157.1 223 49.3
BcaB06g27061 Brassica carinata HOM05D003795 ORTHO05D004308 5.5e-35 153.3 604 33.1
AT1G65710 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 9.3e-35 152.5 516 35.7
AL7G45860 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 1.3e-33 148.7 632 32.1
AL2G22840 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 2.3e-33 147.9 524 33.4
CARHR216000 Cardamine hirsuta HOM05D003795 ORTHO05D004308 3.0e-33 147.5 639 31.3
Sp7g05490 Schrenkiella parvula HOM05D003795 ORTHO05D004308 3.9e-33 147.1 636 31.9
Atru.chr1.2190 Acer truncatum HOM05D003795 ORTHO05D004308 6.7e-33 146.4 593 32.9
Aa31LG9G17690 Aethionema arabicum HOM05D003795 ORTHO05D004308 1.3e-31 142.1 680 31.0
C04p43990 Brassica napus HOM05D003795 ORTHO05D004308 4.8e-31 140.2 624 31.6
BcaC02g09547 Brassica carinata HOM05D003795 ORTHO05D004308 1.8e-30 138.3 632 31.5
Zm00001eb075920 Zea mays HOM05D003795 ORTHO05D004308 3.1e-30 137.5 418 33.0
BolC4t25981H Brassica oleracea HOM05D003795 ORTHO05D004308 6.9e-30 136.3 625 31.5
PGR042G3398 Punica granatum HOM05D003795 ORTHO05D004308 1.5e-29 135.2 686 29.9
Sp5g20650 Schrenkiella parvula HOM05D003795 ORTHO05D004308 1.5e-29 135.2 541 33.1
Carub.0002s1153 Capsella rubella HOM05D003795 ORTHO05D004308 2.0e-29 134.8 531 31.5
CARHR057540 Cardamine hirsuta HOM05D003795 ORTHO05D004308 1.0e-28 132.5 513 31.6
CDE04G0398 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 1.4e-27 128.6 719 28.0
Thhalv10018248m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 1.9e-27 128.3 591 32.0
CDE08G0767 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 2.5e-27 127.9 599 30.4
Thhalv10018468m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 3.2e-27 127.5 579 30.9
Carub.0007s3228 Capsella rubella HOM05D003795 ORTHO05D004308 1.8e-25 121.7 584 30.1
VMungo1215G2457 Vigna mungo HOM05D003795 ORTHO05D004308 3.0e-25 120.9 330 37.0
HPP92_013140 Vanilla planifolia HOM05D003795 ORTHO05D004308 5.1e-25 120.2 599 31.9
Sc20g0000860 Simmondsia chinensis HOM05D003795 ORTHO05D004308 1.5e-24 118.6 739 29.4
EL10Ac4g08850 Beta vulgaris HOM05D003795 ORTHO05D004308 2.5e-24 117.9 735 27.8
MD12G1074700 Malus domestica HOM05D003795 ORTHO05D004308 5.7e-24 116.7 484 33.1
CDE07G0419 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 5.3e-22 110.2 545 29.9
A04p10490 Brassica napus HOM05D003795 ORTHO05D004308 2.2e-20 104.8 367 33.8
Lsat_1_v5_gn_8_114961 Lactuca sativa HOM05D003795 ORTHO05D004308 6.5e-20 103.2 508 28.0
Aqoxy2G03712 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 4.2e-19 100.5 258 34.5
Lalb_Chr10g0103891 Lupinus albus HOM05D003795 ORTHO05D004308 2.3e-17 94.7 411 31.9
AUR62017269 Chenopodium quinoa HOM05D003795 ORTHO05D004308 2.6e-16 91.3 463 27.4
VMungo1383G0923 Vigna mungo HOM05D003795 ORTHO05D004308 9.7e-16 89.4 120 48.3
Prupe.7G058700 Prunus persica HOM05D003795 ORTHO05D004308 2.8e-15 87.8 324 34.3
A08p00830 Brassica napus HOM05D003795 ORTHO05D004308 8.5e-12 76.3 483 28.4
ECA232G0457 Erigeron canadensis HOM05D003795 ORTHO05D004308 2.5e-11 74.7 75 53.3
Peaxi162Scf00116g00915 Petunia axillaris HOM05D004744 ORTHO05D005655 2.5e-11 74.7 158 39.9
BcaB05g24123 Brassica carinata HOM05D003795 ORTHO05D004308 5.5e-11 73.6 349 28.9
BolC3t21550H Brassica oleracea HOM05D003795 ORTHO05D004308 2.1e-10 71.6 480 25.4
BcaC01g01477 Brassica carinata HOM05D003795 ORTHO05D004308 1.8e-09 68.6 492 29.1
C03p92420 Brassica napus HOM05D003795 ORTHO05D004308 1.8e-09 68.6 492 29.1
Oeu030973.1 Olea europaea HOM05D003795 ORTHO05D004308 5.2e-09 67.0 102 46.1
BcaB04g16989 Brassica carinata HOM05D003795 ORTHO05D004308 1.1e-08 65.9 410 29.0
Peaxi162Scf00036g00224 Petunia axillaris HOM05D002102 ORTHO05D004119 1.1e-08 65.9 149 38.9
Peaxi162Scf00116g00091 Petunia axillaris HOM05D004744 ORTHO05D005655 1.5e-08 65.5 120 40.8
Sabra16G0322400 Salix brachista HOM05D003795 ORTHO05D004308 1.5e-08 65.5 66 63.6
Os02g0638200 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 2.0e-08 65.1 166 35.5
AUR62010626 Chenopodium quinoa HOM05D003795 ORTHO05D004308 1.7e-07 62.0 158 32.3
AUR62010625 Chenopodium quinoa HOM05D003795 ORTHO05D004308 1.4e-06 58.9 187 35.3


User provided reference genes

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