Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041412.1 Olea europaea HOM05D001966 ORTHO05D010986 3.9e-33 144.1 65 100.0
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 3.7e-23 110.9 64 81.2
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 5.3e-22 107.1 64 79.7
Nitab4.5_0001761g0140 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.5e-21 105.5 64 79.7
Nitab4.5_0004137g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.4e-21 104.4 62 80.6
Peaxi162Scf00994g00002 Petunia axillaris HOM05D001966 ORTHO05D010986 3.4e-21 104.4 57 86.0
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 4.5e-21 104.0 65 76.9
Nitab4.5_0001986g0110 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.8e-20 100.9 63 77.8
Nitab4.5_0012234g0090 Nicotiana tabacum HOM05D001966 ORTHO05D010986 2.3e-17 91.7 58 79.3
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 1.5e-16 89.0 52 80.8
Psat7g093280 Pisum sativum HOM05D001966 ORTHO05D010986 1.9e-16 88.6 66 66.7
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.9e-16 88.6 52 80.8
Cfa023005 Carpinus fangiana HOM05D001966 ORTHO05D010986 2.5e-16 88.2 52 80.8
Aqoxy38s012 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 4.3e-16 87.4 52 80.8
Aqoxy4G02030 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 4.3e-16 87.4 52 80.8
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 4.3e-16 87.4 52 80.8
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.7e-16 87.0 64 70.3
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 5.7e-16 87.0 52 78.8
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 2.1e-15 85.1 52 78.8
CsaV3_UNG196500 Cucumis sativus L. HOM05D001966 ORTHO05D010986 6.3e-15 83.6 52 78.8
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 6.3e-15 83.6 56 69.6
Sed0001789 Sechium edule HOM05D001966 ORTHO05D010986 6.3e-15 83.6 52 78.8
Sed0007694 Sechium edule HOM05D001966 ORTHO05D010986 6.3e-15 83.6 52 78.8
Sed0023467 Sechium edule HOM05D001966 ORTHO05D010986 6.3e-15 83.6 52 78.8
Sed0025793 Sechium edule HOM05D001966 ORTHO05D010986 6.3e-15 83.6 52 78.8
Cpa.g.sc23.86 Carica papaya HOM05D001966 ORTHO05D010986 2.4e-14 81.6 52 76.9
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 1.0e-12 76.3 50 72.0
ClCG09G021430 Citrullus lanatus HOM05D001966 ORTHO05D010986 3.8e-12 74.3 52 73.1
CSS0015594 Camellia sinensis var. sinensis HOM05D001966 ORTHO05D010986 1.4e-11 72.4 41 85.4
Nitab4.5_0006502g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.4e-11 72.4 54 68.5
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 1.9e-11 72.0 44 75.0
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 2.5e-11 71.6 47 70.2
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.6e-10 68.9 44 77.3
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 1.6e-10 68.9 44 77.3
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.6e-10 68.9 44 77.3
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.6e-10 68.9 44 77.3
Nitab4.5_0007400g0150 Nicotiana tabacum HOM05D001966 ORTHO05D010986 6.1e-10 67.0 54 63.0
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 1.8e-09 65.5 44 72.7
Nitab4.5_0009355g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.8e-09 65.5 38 84.2
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 4.3e-08 60.8 51 64.7
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 1.4e-06 55.8 36 75.0
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 2.4e-06 55.1 48 62.5
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 2.4e-06 55.1 48 62.5
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 2.4e-06 55.1 31 74.2
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 3.1e-06 54.7 36 69.4
arahy.Tifrunner.gnm1.ann1.X4EL03 Arachis hypogaea HOM05D001966 ORTHO05D010986 5.3e-06 53.9 31 77.4
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 5.3e-06 53.9 43 65.1
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 6.9e-06 53.5 31 80.6
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 6.9e-06 53.5 31 80.6
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 6.9e-06 53.5 31 80.6
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 6.9e-06 53.5 31 80.6
arahy.Tifrunner.gnm1.ann1.LY649L Arachis hypogaea HOM05D001966 ORTHO05D010986 6.9e-06 53.5 31 80.6
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 6.9e-06 53.5 31 80.6
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 6.9e-06 53.5 31 80.6
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 9.0e-06 53.1 32 78.1
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 9.0e-06 53.1 32 78.1
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 9.0e-06 53.1 32 78.1
CARHR282380 Cardamine hirsuta HOM05D001966 ORTHO05D010986 9.0e-06 53.1 32 78.1
CARHR282500 Cardamine hirsuta HOM05D001966 ORTHO05D010986 9.0e-06 53.1 32 78.1


User provided reference genes

Program Settings