Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041410.2 Olea europaea HOM05D002608 ORTHO05D013420 1.9e-92 342.8 220 100.0
Oeu049216.1 Olea europaea HOM05D002608 ORTHO05D003838 1.0e-40 171.0 215 67.4
MSTRG.18039 Avicennia marina HOM05D002608 ORTHO05D003838 4.1e-34 149.1 205 62.9
Nitab4.5_0000216g0080 Nicotiana tabacum HOM05D002608 ORTHO05D003838 4.1e-34 149.1 218 57.8
Oeu036170.1 Olea europaea HOM05D002608 ORTHO05D013420 5.4e-34 148.7 141 69.5
TAR374G0864 Trochodendron aralioides HOM05D002608 ORTHO05D003838 7.0e-34 148.3 217 53.5
TAR383G0809 Trochodendron aralioides HOM05D002608 ORTHO05D003838 3.5e-33 146.0 212 56.6
Nitab4.5_0000202g0170 Nicotiana tabacum HOM05D002608 ORTHO05D003838 2.2e-32 143.3 219 56.6
SGA_v2.0_scaffold92G28166 Striga asiatica HOM05D002608 ORTHO05D003838 8.5e-32 141.4 214 59.3
Solyc09g010460.3 Solanum lycopersicum HOM05D002608 ORTHO05D003838 2.5e-31 139.8 219 56.2
Sopen09g005200 Solanum pennellii HOM05D002608 ORTHO05D003838 3.2e-31 139.4 219 58.4
CiPaw.09G189400 Carya illinoinensis HOM05D002608 ORTHO05D003838 5.5e-31 138.7 215 60.0
TAR365G0313 Trochodendron aralioides HOM05D002608 ORTHO05D003838 2.1e-30 136.7 217 53.5
Cc06_g02900 Coffea canephora HOM05D002608 ORTHO05D003838 1.0e-29 134.4 222 57.7
TWI36G0315 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 1.0e-29 134.4 219 55.3
TWI56G0709 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 4.0e-29 132.5 215 54.0
Peaxi162Scf00039g01224 Petunia axillaris HOM05D002608 ORTHO05D003838 5.2e-29 132.1 224 54.5
SalBow2G2051 Salvia bowleyana HOM05D002608 ORTHO05D003838 5.2e-29 132.1 180 67.8
Hma1.2p1_0472F.1_g159760 Hydrangea macrophylla HOM05D002608 ORTHO05D003838 8.8e-29 131.3 235 54.0
Nitab4.5_0002077g0030 Nicotiana tabacum HOM05D002608 ORTHO05D003838 3.4e-28 129.4 221 57.5
Nitab4.5_0003267g0030 Nicotiana tabacum HOM05D002608 ORTHO05D003838 3.4e-28 129.4 221 57.5
Sc02g0009020 Simmondsia chinensis HOM05D002608 ORTHO05D003838 3.4e-28 129.4 217 58.1
Nn2g12763 Nelumbo nucifera HOM05D002608 ORTHO05D003838 4.4e-28 129.0 211 52.1
CAN.G97.14 Capsicum annuum HOM05D002608 ORTHO05D003838 9.8e-28 127.9 219 56.6
Lj1g0021618 Lotus japonicus HOM05D002608 ORTHO05D003838 1.3e-27 127.5 224 56.2
MBI01_g01189_MAGBIO Magnolia biondii HOM05D002608 ORTHO05D003838 8.3e-27 124.8 226 51.8
Ca_08783_v3 Cicer arietinum L. HOM05D002608 ORTHO05D003838 1.1e-26 124.4 218 55.0
COL.COLO4_35714 Corchorus olitorius HOM05D002608 ORTHO05D003838 2.4e-26 123.2 173 61.8
Actinidia21508 Actinidia chinensis HOM05D002608 ORTHO05D003838 3.1e-26 122.9 218 52.3
CANSAT56G4271 Cannabis sativa HOM05D002608 ORTHO05D003838 5.4e-26 122.1 237 53.2
Cfa017421 Carpinus fangiana HOM05D002608 ORTHO05D003838 1.2e-25 120.9 221 56.6
Cfa006672 Carpinus fangiana HOM05D002608 ORTHO05D003838 2.0e-25 120.2 239 49.0
Haze_20749 Corylus avellana HOM05D002608 ORTHO05D003838 7.8e-25 118.2 221 52.5
TWI12G0370 Tripterygium wilfordii HOM05D002608 ORTHO05D003838 7.8e-25 118.2 221 47.1
VMungo1383G2288 Vigna mungo HOM05D002608 ORTHO05D003838 7.8e-25 118.2 213 56.8
Dinv05264 Davidia involucrata HOM05D002608 ORTHO05D003838 1.3e-24 117.5 211 54.5
Lsat_1_v5_gn_1_55601 Lactuca sativa HOM05D002608 ORTHO05D003838 1.3e-24 117.5 213 57.3
CARHR255150 Cardamine hirsuta HOM05D002608 ORTHO05D003838 1.7e-24 117.1 226 49.6
Migut.H01296 Erythranthe guttata HOM05D002608 ORTHO05D003838 2.3e-24 116.7 223 49.8
Sc15g0004560 Simmondsia chinensis HOM05D002608 ORTHO05D003838 2.3e-24 116.7 225 51.1
Glyma.03G172200 Glycine max HOM05D002608 ORTHO05D003838 2.9e-24 116.3 216 55.1
Manes.08G114400 Manihot esculenta HOM05D002608 ORTHO05D003838 3.8e-24 115.9 170 60.0
Psat3g048960 Pisum sativum HOM05D002608 ORTHO05D003838 5.0e-24 115.5 213 47.9
Sopen10g034110 Solanum pennellii HOM05D002608 ORTHO05D003838 6.6e-24 115.2 219 51.6
BcaB01g01651 Brassica carinata HOM05D002608 ORTHO05D003838 8.6e-24 114.8 207 54.1
Thecc.01G130800 Theobroma cacao HOM05D002608 ORTHO05D003838 8.6e-24 114.8 173 61.3
Thecc.05G318700 Theobroma cacao HOM05D002608 ORTHO05D003838 1.1e-23 114.4 174 64.4
Sabra05G0027400 Salix brachista HOM05D002608 ORTHO05D003838 1.5e-23 114.0 239 49.8
QL05p010646 Quercus lobata HOM05D002608 ORTHO05D003838 1.9e-23 113.6 219 54.8
MBI17_g38311_MAGBIO Magnolia biondii HOM05D002608 ORTHO05D003838 2.5e-23 113.2 219 47.0
Phvul.001G169900 Phaseolus vulgaris HOM05D002608 ORTHO05D003838 2.5e-23 113.2 212 53.8
QL07p047431 Quercus lobata HOM05D002608 ORTHO05D003838 2.5e-23 113.2 219 54.8
Ciclev10000154m.g Citrus clementina HOM05D002608 ORTHO05D003838 3.3e-23 112.8 237 46.8
Atru.chr2.118 Acer truncatum HOM05D002608 ORTHO05D003838 4.3e-23 112.5 267 43.1
Manes.09G174300 Manihot esculenta HOM05D002608 ORTHO05D003838 4.3e-23 112.5 180 59.4
Duzib106G0606 Durio zibethinus HOM05D002608 ORTHO05D003838 5.6e-23 112.1 175 60.0
CiPaw.07G025500 Carya illinoinensis HOM05D002608 ORTHO05D003838 1.6e-22 110.5 227 46.3
CSS0020825 Camellia sinensis var. sinensis HOM05D002608 ORTHO05D003838 2.1e-22 110.2 226 50.9
Solyc10g084670.3 Solanum lycopersicum HOM05D002608 ORTHO05D003838 2.8e-22 109.8 219 50.2
Lalb_Chr20g0113231 Lupinus albus HOM05D002608 ORTHO05D003838 3.6e-22 109.4 219 52.1
FvH4_6g07021 Fragaria vesca HOM05D002608 ORTHO05D003838 8.0e-22 108.2 217 54.4
FAN14G0019 Fragaria x ananassa HOM05D002608 ORTHO05D003838 8.0e-22 108.2 217 54.4
Peaxi162Scf01093g00011 Petunia axillaris HOM05D002608 ORTHO05D003838 1.0e-21 107.8 210 46.7
MD12G1209700 Malus domestica HOM05D002608 ORTHO05D003838 1.4e-21 107.5 222 48.6
QL03p017837 Quercus lobata HOM05D002608 ORTHO05D003838 1.4e-21 107.5 222 42.3
QL93p2009_0049 Quercus lobata HOM05D002608 ORTHO05D003838 1.4e-21 107.5 222 42.3
Ah.04g154230 Amaranthus hybridus HOM05D002608 ORTHO05D013420 1.8e-21 107.1 206 51.9
FAN05G0606 Fragaria x ananassa HOM05D002608 ORTHO05D003838 1.8e-21 107.1 217 54.8
Gohir.A11G268500 Gossypium hirsutum HOM05D002608 ORTHO05D003838 2.3e-21 106.7 177 54.8
Sp6g06010 Schrenkiella parvula HOM05D002608 ORTHO05D003838 2.3e-21 106.7 215 53.5
PGSC0003DMG400008926 Solanum tuberosum HOM05D002608 ORTHO05D003838 3.0e-21 106.3 216 50.5
PGSC0003DMG400010999 Solanum tuberosum HOM05D002608 ORTHO05D003838 3.0e-21 106.3 216 54.6
arahy.Tifrunner.gnm1.ann1.6UH7HR Arachis hypogaea HOM05D002608 ORTHO05D003838 4.0e-21 105.9 215 53.5
Gohir.D08G224200 Gossypium hirsutum HOM05D002608 ORTHO05D003838 4.0e-21 105.9 176 55.7
Sabra13G0010400 Salix brachista HOM05D002608 ORTHO05D003838 4.0e-21 105.9 172 57.0
Prupe.6G317100 Prunus persica HOM05D002608 ORTHO05D003838 5.2e-21 105.5 208 50.0
AL6G45870 Arabidopsis lyrata HOM05D002608 ORTHO05D003838 8.9e-21 104.8 242 44.6
THA.LOC104814584 Tarenaya hassleriana HOM05D002608 ORTHO05D003838 8.9e-21 104.8 188 55.3
FAN02G0527 Fragaria x ananassa HOM05D002608 ORTHO05D003838 1.2e-20 104.4 217 52.5
SalBow6G5981 Salvia bowleyana HOM05D002608 ORTHO05D003838 1.5e-20 104.0 224 50.9
Hund12489 Selenicereus undatus HOM05D002608 ORTHO05D003838 1.5e-20 104.0 233 50.2
Gorai.004G238100 Gossypium raimondii HOM05D002608 ORTHO05D003838 2.0e-20 103.6 176 54.5
arahy.Tifrunner.gnm1.ann1.PFNK2V Arachis hypogaea HOM05D002608 ORTHO05D003838 3.4e-20 102.8 213 53.1
BcaC04g21147 Brassica carinata HOM05D002608 ORTHO05D003838 4.4e-20 102.4 162 60.5
C09p35000 Brassica napus HOM05D002608 ORTHO05D003838 4.4e-20 102.4 162 60.5
BolC9t56346H Brassica oleracea HOM05D002608 ORTHO05D003838 4.4e-20 102.4 162 60.5
CsaV3_1G037240 Cucumis sativus L. HOM05D002608 ORTHO05D003838 7.5e-20 101.7 218 48.2
DCAR_022132 Daucus carota HOM05D002608 ORTHO05D003838 9.8e-20 101.3 182 44.5
Rhsim05G0135800 Rhododendron simsii HOM05D002608 ORTHO05D003838 9.8e-20 101.3 219 52.5
BolC2t10192H Brassica oleracea HOM05D002608 ORTHO05D003838 1.7e-19 100.5 211 54.0
BraA09t38334Z Brassica rapa HOM05D002608 ORTHO05D003838 1.7e-19 100.5 174 56.9
A09p27650 Brassica napus HOM05D002608 ORTHO05D003838 2.2e-19 100.1 160 60.0
ECA240G3079 Erigeron canadensis HOM05D002608 ORTHO05D003838 3.7e-19 99.4 215 44.2
Aa31LG9G10810 Aethionema arabicum HOM05D002608 ORTHO05D003838 4.9e-19 99.0 199 52.8
Haze_04099 Corylus avellana HOM05D002608 ORTHO05D003838 4.9e-19 99.0 224 43.3
Potri.005G021400 Populus trichocarpa HOM05D002608 ORTHO05D003838 4.9e-19 99.0 172 55.8
BcaC03g16352 Brassica carinata HOM05D002608 ORTHO05D003838 6.4e-19 98.6 181 58.0
C02p41770 Brassica napus HOM05D002608 ORTHO05D003838 6.4e-19 98.6 181 58.0
Aa31LG6G6570 Aethionema arabicum HOM05D002608 ORTHO05D003838 1.4e-18 97.4 212 50.5
Thhalv10028395m.g Eutrema salsugineum HOM05D002608 ORTHO05D003838 1.4e-18 97.4 231 47.6
Hma1.2p1_1441F.1_g283600 Hydrangea macrophylla HOM05D002608 ORTHO05D003838 1.4e-18 97.4 181 51.9
BcaC01g04630 Brassica carinata HOM05D002608 ORTHO05D003838 1.8e-18 97.1 212 47.6
DCAR_014838 Daucus carota HOM05D002608 ORTHO05D003838 1.8e-18 97.1 215 50.2
BcaB01g02695 Brassica carinata HOM05D002608 ORTHO05D003838 3.2e-18 96.3 212 50.9
BolC3t15861H Brassica oleracea HOM05D002608 ORTHO05D003838 3.2e-18 96.3 212 47.2
A03p29350 Brassica napus HOM05D002608 ORTHO05D003838 4.1e-18 95.9 212 50.9
RcHm_v2.0_Chr3g0456551 Rosa chinensis HOM05D002608 ORTHO05D003838 4.1e-18 95.9 217 51.6
MELO3C002822.2 Cucumis melo HOM05D002608 ORTHO05D003838 7.0e-18 95.1 191 53.9
A02p26260 Brassica napus HOM05D002608 ORTHO05D003838 1.6e-17 94.0 223 51.1
BraA02t07627Z Brassica rapa HOM05D002608 ORTHO05D003838 1.6e-17 94.0 223 51.1
BraA03t12132Z Brassica rapa HOM05D002608 ORTHO05D003838 1.6e-17 94.0 212 50.9
EL10Ac4g09869 Beta vulgaris HOM05D002608 ORTHO05D003838 2.7e-17 93.2 244 45.9
SGA_v2.0_scaffold92G28173 Striga asiatica HOM05D002608 ORTHO05D013420 3.5e-17 92.8 168 54.8
Glyma.19G173100 Glycine max HOM05D002608 ORTHO05D003838 4.6e-17 92.4 214 50.0
Potri.013G011900 Populus trichocarpa HOM05D002608 ORTHO05D003838 1.0e-16 91.3 168 52.4
CiPaw.10G143500 Carya illinoinensis HOM05D002608 ORTHO05D003838 1.3e-16 90.9 225 50.2
PGR031G1858 Punica granatum HOM05D002608 ORTHO05D003838 1.3e-16 90.9 213 47.9
C03p35460 Brassica napus HOM05D002608 ORTHO05D003838 1.7e-16 90.5 212 46.2
Carub.0006s3036 Capsella rubella HOM05D002608 ORTHO05D003838 3.0e-16 89.7 219 46.1
CsaV3_1G037250 Cucumis sativus L. HOM05D002608 ORTHO05D003838 3.0e-16 89.7 225 45.8
PGR142G3882 Punica granatum HOM05D002608 ORTHO05D003838 6.6e-16 88.6 211 46.9
ECA247G1225 Erigeron canadensis HOM05D002608 ORTHO05D003838 8.6e-16 88.2 214 43.5
Gorai.007G300600 Gossypium raimondii HOM05D002608 ORTHO05D003838 1.1e-15 87.8 177 50.8
MELO3C035497.2 Cucumis melo HOM05D002608 ORTHO05D003838 2.5e-15 86.7 225 46.7
Lalb_Chr01g0019231 Lupinus albus HOM05D002608 ORTHO05D003838 2.5e-15 86.7 222 45.5
Ca_08785_v3 Cicer arietinum L. HOM05D002608 ORTHO05D003838 3.3e-15 86.3 202 51.0
ClCG03G006160 Citrullus lanatus HOM05D002608 ORTHO05D003838 3.3e-15 86.3 184 52.2
Eucgr.H03271 Eucalyptus grandis HOM05D002608 ORTHO05D003838 5.6e-15 85.5 242 44.2
ClCG03G006190 Citrullus lanatus HOM05D002608 ORTHO05D003838 7.3e-15 85.1 220 46.8
Gohir.A08G207600 Gossypium hirsutum HOM05D002608 ORTHO05D003838 1.6e-14 84.0 184 45.1
Dinv24411 Davidia involucrata HOM05D002608 ORTHO05D003838 2.1e-14 83.6 133 59.4
Lj2P99G44 Lonicera japonica HOM05D002608 ORTHO05D013420 3.6e-14 82.8 107 51.4
HPP92_005857 Vanilla planifolia HOM05D002608 ORTHO05D003838 8.0e-14 81.6 217 42.9
AUR62005245 Chenopodium quinoa HOM05D002608 ORTHO05D003838 1.0e-13 81.3 186 45.2
ClCG03G017600 Citrullus lanatus HOM05D002608 ORTHO05D003838 1.0e-13 81.3 224 43.8
Aqoxy7G00914 Aquilegia oxysepala HOM05D002608 ORTHO05D003838 1.4e-13 80.9 227 49.8
Medtr7g099920 Medicago truncatula HOM05D002608 ORTHO05D003838 1.8e-13 80.5 218 47.7
CDE06G2290 Ceratophyllum demersum HOM05D002608 ORTHO05D003838 2.3e-13 80.1 211 44.1
AUR62000719 Chenopodium quinoa HOM05D002608 ORTHO05D003838 3.1e-13 79.7 186 45.2
GSVIVG01031192001 Vitis vinifera HOM05D002608 ORTHO05D003838 3.1e-13 79.7 108 73.1
Migut.F01887 Erythranthe guttata HOM05D002608 ORTHO05D003838 4.0e-13 79.3 232 36.2
Os01g0120800 Oryza sativa ssp. japonica HOM05D002608 ORTHO05D003838 4.0e-13 79.3 192 48.4
PSO357G0420 Papaver somniferum HOM05D002608 ORTHO05D003838 5.2e-13 79.0 185 48.1
MBI17_g38313_MAGBIO Magnolia biondii HOM05D002608 ORTHO05D003838 8.9e-13 78.2 220 40.0
Zm00001eb121480 Zea mays HOM05D002608 ORTHO05D003838 8.9e-13 78.2 230 40.4
Sed0023948 Sechium edule HOM05D002608 ORTHO05D003838 1.2e-12 77.8 220 42.7
AT4G11420 Arabidopsis thaliana HOM05D002608 ORTHO05D003838 2.0e-12 77.0 193 48.2
HanXRQChr14g0452151 Helianthus annuus HOM05D002608 ORTHO05D003838 2.6e-12 76.6 201 48.3
FAN12G0216 Fragaria x ananassa HOM05D002608 ORTHO05D013420 3.4e-12 76.3 96 70.8
PSO528G0014 Papaver somniferum HOM05D002608 ORTHO05D003838 3.4e-12 76.3 215 42.3
HanXRQChr09g0247971 Helianthus annuus HOM05D002608 ORTHO05D003838 4.4e-12 75.9 107 69.2
ATR0057G045 Amborella trichopoda HOM05D002608 ORTHO05D003838 5.8e-12 75.5 199 46.7
Ah.13g074150 Amaranthus hybridus HOM05D002608 ORTHO05D021193 7.5e-12 75.1 219 46.6
AUR62034876 Chenopodium quinoa HOM05D002608 ORTHO05D013420 9.8e-12 74.7 135 61.5
COL.COLO4_03801 Corchorus olitorius HOM05D002608 ORTHO05D003838 9.8e-12 74.7 94 62.8
FAN01G2273 Fragaria x ananassa HOM05D002608 ORTHO05D013420 9.8e-12 74.7 94 71.3
FAN03G2739 Fragaria x ananassa HOM05D002608 ORTHO05D013420 9.8e-12 74.7 94 71.3
Gohir.D11G278500 Gossypium hirsutum HOM05D002608 ORTHO05D003838 9.8e-12 74.7 175 48.0
MD04G1196800 Malus domestica HOM05D002608 ORTHO05D003838 9.8e-12 74.7 219 45.2
DCAR_003377 Daucus carota HOM05D002608 ORTHO05D003838 1.3e-11 74.3 186 52.2
Lj2A99G56 Lonicera japonica HOM05D002608 ORTHO05D003838 1.3e-11 74.3 61 68.9
Cpa.g.sc48.127 Carica papaya HOM05D002608 ORTHO05D003838 2.2e-11 73.6 180 45.0
TPR.G7841 Trifolium pratense HOM05D002608 ORTHO05D003838 2.9e-11 73.2 159 49.1
unitig_899.g15197 Utricularia gibba HOM05D002608 ORTHO05D003838 1.4e-10 70.9 237 43.0
Duzib177G0789 Durio zibethinus HOM05D002608 ORTHO05D003838 3.2e-10 69.7 184 42.9
Zm00001eb337210 Zea mays HOM05D002608 ORTHO05D003838 3.2e-10 69.7 161 44.7
PSO170G1119 Papaver somniferum HOM05D002608 ORTHO05D003838 5.4e-10 68.9 215 43.7
Carub.0007s1783 Capsella rubella HOM05D002608 ORTHO05D013040 2.0e-09 67.0 97 45.4
CDE07G0225 Ceratophyllum demersum HOM05D002608 ORTHO05D003838 2.7e-09 66.6 203 43.3
PSO170G4769 Papaver somniferum HOM05D002608 ORTHO05D003838 2.7e-09 66.6 196 43.9
HanXRQChr10g0293771 Helianthus annuus HOM05D002608 ORTHO05D013420 3.5e-09 66.2 55 63.6
Lsat_1_v5_gn_7_67461 Lactuca sativa HOM05D002608 ORTHO05D003838 3.5e-09 66.2 88 61.4
Hund07119 Selenicereus undatus HOM05D002608 ORTHO05D003838 4.6e-09 65.9 113 64.6
Medtr7g087180 Medicago truncatula HOM05D002608 ORTHO05D003838 1.1e-07 61.2 156 49.4
BcaB05g23828 Brassica carinata HOM05D002608 ORTHO05D003838 2.5e-07 60.1 51 64.7
Medtr7g098840 Medicago truncatula HOM05D002608 ORTHO05D017777 2.5e-07 60.1 58 58.6
AUR62026623 Chenopodium quinoa HOM05D002608 ORTHO05D003838 9.5e-07 58.2 134 53.7
ECA234G4518 Erigeron canadensis HOM05D002608 ORTHO05D003031 9.5e-07 58.2 199 47.7
Actinidia19767 Actinidia chinensis HOM05D002608 ORTHO05D003838 1.6e-06 57.4 212 41.5
HanXRQChr09g0247981 Helianthus annuus HOM05D002608 ORTHO05D003838 2.8e-06 56.6 58 58.6


User provided reference genes

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