Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 6.0e-103 377.5 187 100.0
Oeu050751.1 Olea europaea HOM05D009091 ORTHO05D003768 3.7e-52 208.8 119 88.2
Oeu048290.1 Olea europaea HOM05D009091 ORTHO05D003768 4.9e-44 181.8 122 77.0
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 3.8e-41 172.2 174 54.0
Oeu060777.1 Olea europaea HOM05D009091 ORTHO05D003768 7.0e-27 124.8 133 52.6
Oeu059542.1 Olea europaea HOM05D009091 ORTHO05D003768 3.5e-26 122.5 132 56.1
Oeu016711.1 Olea europaea HOM05D023826 ORTHO05D003768 2.5e-24 116.3 68 80.9
Oeu005258.1 Olea europaea HOM05D009091 ORTHO05D003768 4.0e-22 109.0 86 67.4
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 1.7e-20 103.6 147 44.2
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.2e-19 99.4 170 37.1
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.6e-18 95.5 194 34.5
Oeu031012.1 Olea europaea HOM05D009091 ORTHO05D003768 1.7e-17 93.6 57 77.2
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 5.1e-17 92.0 191 34.6
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 1.9e-16 90.1 185 34.1
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.3e-16 89.4 170 34.1
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 5.6e-16 88.6 158 33.5
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 5.6e-16 88.6 141 34.0
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 8.1e-15 84.7 202 30.7
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 2.3e-14 83.2 180 30.0
Oeu008260.1 Olea europaea HOM05D009091 ORTHO05D003768 3.1e-14 82.8 66 56.1
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 3.1e-14 82.8 263 28.5
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 5.2e-14 82.0 205 31.7
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 6.8e-14 81.6 188 28.7
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-13 80.9 141 39.7
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 2.0e-13 80.1 179 33.5
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.0e-13 80.1 205 33.7
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 3.4e-13 79.3 182 30.8
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 9.9e-13 77.8 253 27.3
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.9e-12 75.5 150 37.3
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 1.1e-11 74.3 211 30.3
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-11 73.6 167 35.9
PSO675G7499 Papaver somniferum HOM05D008526 ORTHO05D010380 2.4e-11 73.2 197 23.4
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 3.2e-11 72.8 143 34.3
Oeu029662.1 Olea europaea HOM05D009091 ORTHO05D003768 4.1e-11 72.4 92 39.1
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 5.4e-11 72.0 227 26.9
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 7.1e-11 71.6 196 29.6
RcHm_v2.0_Chr4g0386541 Rosa chinensis HOM05D009091 ORTHO05D003768 7.1e-11 71.6 96 44.8
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 9.2e-11 71.2 181 30.9
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.2e-11 71.2 165 34.5
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 9.2e-11 71.2 251 25.9
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 9.2e-11 71.2 184 27.7
Oeu007614.1 Olea europaea HOM05D009091 ORTHO05D003768 2.1e-10 70.1 44 72.7
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 3.5e-10 69.3 180 28.9
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 4.6e-10 68.9 167 31.1
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.8e-10 68.2 165 33.9
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.0e-09 67.8 153 34.0
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 1.0e-09 67.8 122 32.0
RcHm_v2.0_Chr1g0357501 Rosa chinensis HOM05D009091 ORTHO05D003768 1.0e-09 67.8 140 34.3
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 2.3e-09 66.6 227 27.3
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 2.3e-09 66.6 143 31.5
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.0e-09 66.2 150 32.7
FvH4_4g03221 Fragaria vesca HOM05D000014 ORTHO05D000016 3.0e-09 66.2 158 30.4
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 3.9e-09 65.9 105 28.6
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 3.9e-09 65.9 141 34.0
Oeu054603.1 Olea europaea HOM05D009091 ORTHO05D003768 3.9e-09 65.9 44 68.2
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 3.9e-09 65.9 126 34.1
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 5.1e-09 65.5 120 33.3
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 6.6e-09 65.1 105 33.3
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 8.6e-09 64.7 148 30.4
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.6e-09 64.7 209 26.8
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 1.1e-08 64.3 137 31.4
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 1.5e-08 63.9 161 30.4
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.5e-08 63.9 140 30.7
FAN11G0973 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.5e-08 63.2 135 26.7
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.5e-08 63.2 78 42.3
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.3e-08 62.8 106 36.8
Rhsim05G0198600 Rhododendron simsii HOM05D000030 ORTHO05D003768 3.3e-08 62.8 97 35.1
RcHm_v2.0_Chr4g0420561 Rosa chinensis HOM05D009091 ORTHO05D003768 3.3e-08 62.8 157 29.3
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.6e-08 61.2 107 35.5
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.6e-08 61.2 107 35.5
FAN22G1616 Fragaria x ananassa HOM05D009091 ORTHO05D003768 9.6e-08 61.2 96 36.5
FAN22G1442 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.2e-07 60.8 123 30.9
Atru.chr9.1118 Acer truncatum HOM05D007314 ORTHO05D003768 2.1e-07 60.1 100 31.0
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-07 60.1 146 30.8
Nn7g37991 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.8e-07 59.7 77 39.0
TAR472G0003 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.6e-07 59.3 101 33.7
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 4.7e-07 58.9 84 36.9
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.7e-07 58.9 156 30.1
FAN03G1875 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.2e-07 58.5 191 29.3
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.2e-07 58.5 70 44.3
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-06 57.8 107 34.6
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-06 57.8 107 34.6
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-06 57.8 107 34.6
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-06 57.8 107 34.6
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-06 57.8 109 31.2
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-06 57.8 139 34.5
Nitab4.5_0003353g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-06 57.8 68 42.6
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-06 57.8 96 30.2
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-06 57.4 135 34.1
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 1.4e-06 57.4 109 29.4
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.8e-06 57.0 107 34.6
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 1.8e-06 57.0 145 29.0
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.8e-06 57.0 84 39.3
Peaxi162Scf00417g00048 Petunia axillaris HOM05D002954 ORTHO05D003353 1.8e-06 57.0 75 40.0
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 2.4e-06 56.6 105 37.1
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 2.4e-06 56.6 132 26.5
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.4e-06 56.6 92 28.3
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.4e-06 56.6 122 24.6
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.1e-06 56.2 131 30.5
Sopen01g012120 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-06 56.2 125 30.4
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.0e-06 55.8 157 29.9
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 4.0e-06 55.8 75 41.3
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.0e-06 55.8 123 24.4
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.2e-06 55.5 92 28.3
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.2e-06 55.5 71 32.4
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.8e-06 55.1 117 27.4
FvH4_4g17212 Fragaria vesca HOM05D008321 ORTHO05D003768 6.8e-06 55.1 131 30.5
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 6.8e-06 55.1 75 33.3
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.8e-06 55.1 82 31.7
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.8e-06 55.1 101 26.7
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 6.8e-06 55.1 71 42.3
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 8.9e-06 54.7 136 29.4
MBI02_g15369_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.9e-06 54.7 103 30.1
Nitab4.5_0000140g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.9e-06 54.7 70 40.0
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.9e-06 54.7 70 41.4
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 8.9e-06 54.7 127 31.5


User provided reference genes

Program Settings