Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041303.2 Olea europaea HOM05D000918 ORTHO05D000791 5.6e-43 177.2 88 100.0
Oeu048587.1 Olea europaea HOM05D000918 ORTHO05D000791 1.2e-21 106.3 58 86.2
MSTRG.24068 Avicennia marina HOM05D000918 ORTHO05D000791 4.3e-19 97.8 56 82.1
A07p20520 Brassica napus HOM05D000918 ORTHO05D000791 3.7e-18 94.7 58 72.4
BraA07t29743Z Brassica rapa HOM05D000918 ORTHO05D000791 3.7e-18 94.7 58 72.4
SGA_v2.0_scaffold47G17552 Striga asiatica HOM05D000918 ORTHO05D000791 4.8e-18 94.4 57 80.7
BcaB02g07928 Brassica carinata HOM05D000918 ORTHO05D000791 6.3e-18 94.0 58 72.4
Ciclev10015153m.g Citrus clementina HOM05D000918 ORTHO05D000791 6.3e-18 94.0 58 75.9
AL7G48960 Arabidopsis lyrata HOM05D000918 ORTHO05D000791 8.2e-18 93.6 58 74.1
Carub.0007s3473 Capsella rubella HOM05D000918 ORTHO05D000791 8.2e-18 93.6 58 72.4
CARHR213760 Cardamine hirsuta HOM05D000918 ORTHO05D000791 1.1e-17 93.2 58 72.4
Sp7g01140 Schrenkiella parvula HOM05D000918 ORTHO05D000791 1.1e-17 93.2 58 72.4
Aa31LG9G890 Aethionema arabicum HOM05D000918 ORTHO05D000791 1.4e-17 92.8 58 74.1
AT5G40760 Arabidopsis thaliana HOM05D000918 ORTHO05D000791 1.8e-17 92.4 58 74.1
BolC6t37132H Brassica oleracea HOM05D000918 ORTHO05D000791 2.4e-17 92.0 58 70.7
BcaC08g44486 Brassica carinata HOM05D000918 ORTHO05D000791 6.9e-17 90.5 58 69.0
C06p19370 Brassica napus HOM05D000918 ORTHO05D000791 6.9e-17 90.5 58 69.0
Thhalv10027727m.g Eutrema salsugineum HOM05D000918 ORTHO05D000791 1.2e-16 89.7 58 70.7
CSS0004452 Camellia sinensis var. sinensis HOM05D000918 ORTHO05D000791 1.5e-16 89.4 58 72.4
Eucgr.I01691 Eucalyptus grandis HOM05D000918 ORTHO05D000791 1.5e-16 89.4 58 72.4
MSTRG.15552 Avicennia marina HOM05D000918 ORTHO05D000791 2.6e-16 88.6 57 77.2
THA.LOC104805343 Tarenaya hassleriana HOM05D000918 ORTHO05D000791 3.4e-16 88.2 58 70.7
Aa31LG2G5330 Aethionema arabicum HOM05D000918 ORTHO05D000791 4.5e-16 87.8 58 70.7
Migut.H00061 Erythranthe guttata HOM05D000918 ORTHO05D000791 4.5e-16 87.8 54 75.9
Dinv33382 Davidia involucrata HOM05D000918 ORTHO05D000791 1.0e-15 86.7 58 72.4
SalBow1G0357 Salvia bowleyana HOM05D000918 ORTHO05D000791 1.0e-15 86.7 58 75.9
TWI56G0469 Tripterygium wilfordii HOM05D000918 ORTHO05D000791 1.0e-15 86.7 58 70.7
Rhsim10G0011000 Rhododendron simsii HOM05D000918 ORTHO05D000791 1.3e-15 86.3 58 69.0
Oeu058761.1 Olea europaea HOM05D000918 ORTHO05D000791 1.7e-15 85.9 56 78.6
QL02p072852 Quercus lobata HOM05D000918 ORTHO05D000791 1.7e-15 85.9 58 72.4
RhsimUnG0241400 Rhododendron simsii HOM05D000918 ORTHO05D000791 1.7e-15 85.9 58 69.0
BcaC04g23907 Brassica carinata HOM05D000918 ORTHO05D000791 2.2e-15 85.5 58 70.7
A09p03360 Brassica napus HOM05D000918 ORTHO05D000791 2.2e-15 85.5 58 70.7
C09p03570 Brassica napus HOM05D000918 ORTHO05D000791 2.2e-15 85.5 58 70.7
BolC9t53278H Brassica oleracea HOM05D000918 ORTHO05D000791 2.2e-15 85.5 58 70.7
BraA09t35974Z Brassica rapa HOM05D000918 ORTHO05D000791 2.2e-15 85.5 58 70.7
unitig_744.g24366 Utricularia gibba HOM05D000918 ORTHO05D000791 2.2e-15 85.5 60 73.3
GSVIVG01001847001 Vitis vinifera HOM05D000918 ORTHO05D000791 2.2e-15 85.5 58 70.7
CiPaw.04G033200 Carya illinoinensis HOM05D000918 ORTHO05D000791 2.9e-15 85.1 58 67.2
THA.LOC104823966 Tarenaya hassleriana HOM05D000918 ORTHO05D000791 2.9e-15 85.1 69 60.9
Carub.0005s0557 Capsella rubella HOM05D000918 ORTHO05D000791 3.8e-15 84.7 58 70.7
BcaB04g19434 Brassica carinata HOM05D000918 ORTHO05D000791 5.0e-15 84.3 58 70.7
Cfa007276 Carpinus fangiana HOM05D000918 ORTHO05D000791 5.0e-15 84.3 53 75.5
SalBow1G2763 Salvia bowleyana HOM05D000918 ORTHO05D000791 5.0e-15 84.3 58 74.1
Actinidia36167 Actinidia chinensis HOM05D000918 ORTHO05D000791 6.5e-15 84.0 58 70.7
AT3G27300 Arabidopsis thaliana HOM05D000918 ORTHO05D000791 6.5e-15 84.0 58 69.0
Cc07_g00420 Coffea canephora HOM05D000918 ORTHO05D000791 6.5e-15 84.0 58 72.4
Migut.K01437 Erythranthe guttata HOM05D000918 ORTHO05D000791 8.5e-15 83.6 55 76.4
Peaxi162Scf00420g00343 Petunia axillaris HOM05D000918 ORTHO05D050255 8.5e-15 83.6 56 75.0
Peaxi162Scf00420g00346 Petunia axillaris HOM05D000918 ORTHO05D000791 8.5e-15 83.6 56 75.0
CARHR148580 Cardamine hirsuta HOM05D000918 ORTHO05D000791 1.1e-14 83.2 58 70.7
Cpa.g.sc130.39 Carica papaya HOM05D000918 ORTHO05D000791 1.1e-14 83.2 54 72.2
vmacro05925 Vaccinium macrocarpon HOM05D000918 ORTHO05D000791 1.1e-14 83.2 58 69.0
Potri.017G070200 Populus trichocarpa HOM05D000918 ORTHO05D000791 1.4e-14 82.8 58 65.5
AL5G16530 Arabidopsis lyrata HOM05D000918 ORTHO05D000791 1.9e-14 82.4 56 71.4
CiPaw.03G050600 Carya illinoinensis HOM05D000918 ORTHO05D000791 1.9e-14 82.4 58 67.2
Gohir.A07G225800 Gossypium hirsutum HOM05D000918 ORTHO05D000791 1.9e-14 82.4 58 70.7
Lj7C605G11 Lonicera japonica HOM05D000918 ORTHO05D000791 1.9e-14 82.4 58 69.0
Sp2g16460 Schrenkiella parvula HOM05D000918 ORTHO05D000791 1.9e-14 82.4 58 69.0
Sopen02g038470 Solanum pennellii HOM05D000918 ORTHO05D000791 1.9e-14 82.4 56 73.2
PGSC0003DMG400020269 Solanum tuberosum HOM05D000918 ORTHO05D000791 1.9e-14 82.4 56 73.2
CsaV3_4G031080 Cucumis sativus L. HOM05D000918 ORTHO05D000791 2.5e-14 82.0 58 69.0
Duzib187G1278 Durio zibethinus HOM05D000918 ORTHO05D000791 2.5e-14 82.0 58 70.7
Manes.17G107200 Manihot esculenta HOM05D000918 ORTHO05D000791 2.5e-14 82.0 58 70.7
TWI36G1484 Tripterygium wilfordii HOM05D000918 ORTHO05D000791 2.5e-14 82.0 58 67.2
Dinv25692 Davidia involucrata HOM05D000918 ORTHO05D000791 3.2e-14 81.6 58 70.7
SGA_v2.0_scaffold18G08238 Striga asiatica HOM05D000918 ORTHO05D000791 3.2e-14 81.6 54 72.2
Manes.15G156500 Manihot esculenta HOM05D000918 ORTHO05D000791 4.2e-14 81.3 58 67.2
Ah.06g187330 Amaranthus hybridus HOM05D000918 ORTHO05D000791 5.5e-14 80.9 60 68.3
Haze_14816 Corylus avellana HOM05D000918 ORTHO05D000791 5.5e-14 80.9 56 66.1
Thhalv10004014m.g Eutrema salsugineum HOM05D000918 ORTHO05D000791 7.2e-14 80.5 58 69.0
Sc07g0004430 Simmondsia chinensis HOM05D000918 ORTHO05D000791 9.4e-14 80.1 60 68.3
CANSAT64G2427 Cannabis sativa HOM05D000918 ORTHO05D000791 1.2e-13 79.7 58 65.5
VMungo1383G3437 Vigna mungo HOM05D000918 ORTHO05D000791 1.2e-13 79.7 59 67.8
Glyma.19G082300 Glycine max HOM05D000918 ORTHO05D000791 1.6e-13 79.3 59 67.8
CAN.G473.67 Capsicum annuum HOM05D000918 ORTHO05D000791 2.1e-13 79.0 56 69.6
Gohir.D07G233000 Gossypium hirsutum HOM05D000918 ORTHO05D000791 2.1e-13 79.0 58 67.2
Gorai.001G268300 Gossypium raimondii HOM05D000918 ORTHO05D000791 2.1e-13 79.0 58 67.2
Hma1.2p1_0279F.1_g112280 Hydrangea macrophylla HOM05D000918 ORTHO05D000791 2.1e-13 79.0 58 70.7
Nitab4.5_0001863g0080 Nicotiana tabacum HOM05D000918 ORTHO05D000791 2.1e-13 79.0 56 71.4
Actinidia05943 Actinidia chinensis HOM05D000918 ORTHO05D000791 2.7e-13 78.6 52 73.1
Ah.04g163530 Amaranthus hybridus HOM05D000918 ORTHO05D000791 2.7e-13 78.6 60 66.7
Phvul.008G148700 Phaseolus vulgaris HOM05D000918 ORTHO05D000791 2.7e-13 78.6 59 66.1
DCAR_015077 Daucus carota HOM05D000918 ORTHO05D000791 3.6e-13 78.2 58 67.2
HanXRQChr15g0475151 Helianthus annuus HOM05D000918 ORTHO05D000791 4.6e-13 77.8 58 69.0
Nn4g22437 Nelumbo nucifera HOM05D000918 ORTHO05D000791 4.6e-13 77.8 60 66.7
Potri.001G337400 Populus trichocarpa HOM05D000918 ORTHO05D000791 4.6e-13 77.8 58 63.8
Thecc.04G027700 Theobroma cacao HOM05D000918 ORTHO05D000791 4.6e-13 77.8 58 69.0
TAR371G0525 Trochodendron aralioides HOM05D000918 ORTHO05D000791 4.6e-13 77.8 47 83.0
Nn3g16564 Nelumbo nucifera HOM05D000918 ORTHO05D000791 6.1e-13 77.4 52 76.9
ClCG04G001430 Citrullus lanatus HOM05D000918 ORTHO05D000791 7.9e-13 77.0 58 67.2
Sabra16G0218200 Salix brachista HOM05D000918 ORTHO05D000791 7.9e-13 77.0 58 62.1
Sed0028078 Sechium edule HOM05D000918 ORTHO05D000791 7.9e-13 77.0 57 66.7
Glyma.16G063200 Glycine max HOM05D000918 ORTHO05D000791 1.0e-12 76.6 59 66.1
Psat1g084200 Pisum sativum HOM05D000918 ORTHO05D000791 1.0e-12 76.6 59 69.5
A06p41310 Brassica napus HOM05D000918 ORTHO05D000791 1.4e-12 76.3 59 67.8
BraA06t27056Z Brassica rapa HOM05D000918 ORTHO05D000791 1.4e-12 76.3 59 67.8
DCAR_011291 Daucus carota HOM05D000918 ORTHO05D000791 1.4e-12 76.3 58 67.2
PGR142G0619 Punica granatum HOM05D000918 ORTHO05D000791 1.4e-12 76.3 59 66.1
arahy.Tifrunner.gnm1.ann1.R0K9MP Arachis hypogaea HOM05D000918 ORTHO05D000791 1.8e-12 75.9 58 63.8
arahy.Tifrunner.gnm1.ann1.UMN62Y Arachis hypogaea HOM05D000918 ORTHO05D000791 1.8e-12 75.9 58 63.8
Lsat_1_v5_gn_0_47540 Lactuca sativa HOM05D000918 ORTHO05D000791 1.8e-12 75.9 58 67.2
MD17G1017900 Malus domestica HOM05D000918 ORTHO05D000791 1.8e-12 75.9 58 69.0
BcaC06g31005 Brassica carinata HOM05D000918 ORTHO05D000791 2.3e-12 75.5 59 67.8
Duzib147G0056 Durio zibethinus HOM05D000918 ORTHO05D000791 2.3e-12 75.5 58 63.8
Hund03205 Selenicereus undatus HOM05D000918 ORTHO05D000791 2.3e-12 75.5 59 67.8
Aqoxy3G01437 Aquilegia oxysepala HOM05D000918 ORTHO05D000791 3.0e-12 75.1 60 66.7
EL10Ac1g01553 Beta vulgaris HOM05D000918 ORTHO05D000791 3.0e-12 75.1 61 65.6
Lj2g0001557 Lotus japonicus HOM05D000918 ORTHO05D000791 3.0e-12 75.1 58 67.2
AUR62031998 Chenopodium quinoa HOM05D000918 ORTHO05D000791 3.9e-12 74.7 60 66.7
FAN05G5286 Fragaria x ananassa HOM05D000918 ORTHO05D000791 3.9e-12 74.7 58 67.2
Gohir.A09G033500 Gossypium hirsutum HOM05D000918 ORTHO05D000791 3.9e-12 74.7 58 65.5
Gohir.D09G033700 Gossypium hirsutum HOM05D000918 ORTHO05D000791 3.9e-12 74.7 58 65.5
Gorai.006G038700 Gossypium raimondii HOM05D000918 ORTHO05D000791 3.9e-12 74.7 58 65.5
Prupe.3G300200 Prunus persica HOM05D000918 ORTHO05D000791 5.1e-12 74.3 58 65.5
arahy.Tifrunner.gnm1.ann1.74FNJK Arachis hypogaea HOM05D000918 ORTHO05D000791 6.7e-12 73.9 59 64.4
arahy.Tifrunner.gnm1.ann1.XC1VLW Arachis hypogaea HOM05D000918 ORTHO05D000791 6.7e-12 73.9 59 64.4
Atru.chr6.2488 Acer truncatum HOM05D000918 ORTHO05D000791 8.8e-12 73.6 58 63.8
Phvul.004G057000 Phaseolus vulgaris HOM05D000918 ORTHO05D000791 1.1e-11 73.2 58 60.3
AUR62018096 Chenopodium quinoa HOM05D000918 ORTHO05D000791 1.5e-11 72.8 60 65.0
RcHm_v2.0_Chr2g0174331 Rosa chinensis HOM05D000918 ORTHO05D000791 2.0e-11 72.4 58 63.8
C07p36350 Brassica napus HOM05D000918 ORTHO05D000791 2.5e-11 72.0 58 63.8
FvH4_6g52720 Fragaria vesca HOM05D000918 ORTHO05D000791 2.5e-11 72.0 58 63.8
FAN14G4228 Fragaria x ananassa HOM05D000918 ORTHO05D000791 2.5e-11 72.0 58 63.8
Sed0022509 Sechium edule HOM05D000918 ORTHO05D000791 4.3e-11 71.2 58 62.1
BcaC06g33834 Brassica carinata HOM05D000918 ORTHO05D000791 5.7e-11 70.9 58 62.1
BolC7t44151H Brassica oleracea HOM05D000918 ORTHO05D000791 5.7e-11 70.9 58 62.1
FAN02G2872 Fragaria x ananassa HOM05D000918 ORTHO05D000791 5.7e-11 70.9 58 63.8
Glyma.19G077300 Glycine max HOM05D000918 ORTHO05D000791 5.7e-11 70.9 59 62.7
PSO017G5502 Papaver somniferum HOM05D000918 ORTHO05D000791 5.7e-11 70.9 51 76.5
PSO478G4371 Papaver somniferum HOM05D000918 ORTHO05D000791 5.7e-11 70.9 51 76.5
TAR629G2794 Trochodendron aralioides HOM05D000918 ORTHO05D000791 5.7e-11 70.9 46 76.1
Ca_04406_v3 Cicer arietinum L. HOM05D000918 ORTHO05D000791 7.4e-11 70.5 54 66.7
FAN09G1894 Fragaria x ananassa HOM05D000918 ORTHO05D000791 9.7e-11 70.1 58 63.8
Lalb_Chr21g0317591 Lupinus albus HOM05D000918 ORTHO05D000791 1.3e-10 69.7 62 61.3
ECA246G1938 Erigeron canadensis HOM05D000918 ORTHO05D000791 2.2e-10 68.9 56 67.9
PSO782G4700 Papaver somniferum HOM05D000918 ORTHO05D000791 2.2e-10 68.9 43 79.1
VMungo0464G0270 Vigna mungo HOM05D000918 ORTHO05D000791 2.2e-10 68.9 59 61.0
Ca_03853_v3 Cicer arietinum L. HOM05D000918 ORTHO05D000791 2.8e-10 68.6 58 63.8
Lalb_Chr14g0363041 Lupinus albus HOM05D000918 ORTHO05D000791 2.8e-10 68.6 59 59.3
MBI11_g31857_MAGBIO Magnolia biondii HOM05D000918 ORTHO05D000791 2.8e-10 68.6 41 78.0
MD09G1017200 Malus domestica HOM05D000918 ORTHO05D000791 2.8e-10 68.6 56 64.3
Medtr7g037440 Medicago truncatula HOM05D000918 ORTHO05D000791 2.8e-10 68.6 58 62.1
Psat3g169360 Pisum sativum HOM05D000918 ORTHO05D000791 2.8e-10 68.6 58 58.6
Gohir.D04G079700 Gossypium hirsutum HOM05D000918 ORTHO05D000791 3.7e-10 68.2 58 60.3
Gorai.012G089700 Gossypium raimondii HOM05D000918 ORTHO05D000791 3.7e-10 68.2 58 60.3
Lalb_Chr02g0157911 Lupinus albus HOM05D000918 ORTHO05D000791 6.3e-10 67.4 62 61.3
TPR.G29002 Trifolium pratense HOM05D000918 ORTHO05D000791 6.3e-10 67.4 53 62.3
CSS0004231 Camellia sinensis var. sinensis HOM05D000918 ORTHO05D000791 8.2e-10 67.0 58 60.3
CSS0050169 Camellia sinensis var. sinensis HOM05D000918 ORTHO05D000791 8.2e-10 67.0 58 60.3
MELO3C008985.2 Cucumis melo HOM05D000918 ORTHO05D000791 8.2e-10 67.0 40 82.5
CDE07G1416 Ceratophyllum demersum HOM05D000121 ORTHO05D000791 1.1e-09 66.6 38 84.2
TPR.G9068 Trifolium pratense HOM05D000918 ORTHO05D000791 1.4e-09 66.2 58 58.6
Gohir.A05G341600 Gossypium hirsutum HOM05D000918 ORTHO05D000791 1.8e-09 65.9 58 58.6
MBI06_g43790_MAGBIO Magnolia biondii HOM05D000918 ORTHO05D000791 2.4e-09 65.5 49 63.3
Medtr6g022860 Medicago truncatula HOM05D000918 ORTHO05D000791 2.4e-09 65.5 53 60.4
PSO782G1306 Papaver somniferum HOM05D000918 ORTHO05D000791 3.1e-09 65.1 37 86.5
DCAR_002962 Daucus carota HOM05D000918 ORTHO05D000791 4.1e-09 64.7 33 90.9
Lj1g0003550 Lotus japonicus HOM05D000918 ORTHO05D000791 5.3e-09 64.3 57 63.2
ATR0824G262 Amborella trichopoda HOM05D000918 ORTHO05D000791 2.0e-08 62.4 47 63.8
Zm00001eb246350 Zea mays HOM05D000918 ORTHO05D000791 4.5e-08 61.2 45 64.4
HanXRQChr15g0487071 Helianthus annuus HOM05D000918 ORTHO05D000791 7.7e-08 60.5 35 82.9
CDE02G0462 Ceratophyllum demersum HOM05D000918 ORTHO05D000791 1.3e-07 59.7 38 76.3
Pp3c23_16910 Physcomitrium patens HOM05D000918 ORTHO05D000791 1.3e-07 59.7 44 68.2
SEGI_01513 Sequoiadendron giganteum HOM05D000918 ORTHO05D000791 1.3e-07 59.7 56 62.5
DCAR_003679 Daucus carota HOM05D000918 ORTHO05D000791 1.7e-07 59.3 40 75.0
Pp3c20_10460 Physcomitrium patens HOM05D000918 ORTHO05D000791 2.2e-07 58.9 29 86.2
SHI03861 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-07 58.9 31 90.3
Os02g0600400 Oryza sativa ssp. japonica HOM05D000918 ORTHO05D000791 2.9e-07 58.5 31 83.9
Os04g0485300 Oryza sativa ssp. japonica HOM05D000918 ORTHO05D000791 5.0e-07 57.8 41 68.3
Zm00001eb079220 Zea mays HOM05D000918 ORTHO05D000791 5.0e-07 57.8 41 65.9
CBR_g18745 Chara braunii HOM05D000918 ORTHO05D000791 1.1e-06 56.6 31 83.9
Pp3c24_8780 Physcomitrium patens HOM05D000918 ORTHO05D000791 1.9e-06 55.8 30 86.7
Mapoly0009s0122 Marchantia polymorpha HOM05D000918 ORTHO05D000791 3.2e-06 55.1 33 75.8
AagrBONN_evm.TU.Sc2ySwM_344.5494 Anthoceros agrestis HOM05D000918 ORTHO05D000791 7.2e-06 53.9 27 92.6
SMO141G0107 Selaginella moellendorffii HOM05D000918 ORTHO05D000791 7.2e-06 53.9 28 89.3


User provided reference genes

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