Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 0.0e+00 1129.4 568 100.0
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 9.4e-224 780.4 660 65.6
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 3.4e-189 665.6 659 56.8
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 8.6e-185 651.0 661 55.8
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 4.3e-184 648.7 662 55.9
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 3.2e-171 605.9 661 51.6
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 6.0e-170 601.7 662 51.7
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 2.5e-168 596.3 657 52.2
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 2.5e-168 596.3 664 51.8
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 4.3e-168 595.5 660 50.6
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 4.3e-168 595.5 653 52.2
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 7.3e-168 594.7 653 51.8
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 1.8e-166 590.1 662 52.0
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 2.0e-165 586.6 724 49.2
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 3.4e-165 585.9 658 50.8
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 4.4e-165 585.5 678 50.0
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 2.4e-163 579.7 660 50.8
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 9.2e-163 577.8 664 51.1
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 1.2e-162 577.4 661 51.3
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 3.5e-162 575.9 661 51.3
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 7.8e-162 574.7 464 63.8
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 2.3e-161 573.2 654 50.5
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 6.6e-161 571.6 649 50.1
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 6.6e-161 571.6 663 50.2
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 8.6e-161 571.2 654 50.8
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 2.5e-160 569.7 660 50.8
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 5.6e-160 568.5 656 50.6
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 4.7e-159 565.5 661 49.0
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 6.2e-159 565.1 654 50.5
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 1.4e-158 563.9 656 50.0
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 1.4e-158 563.9 661 50.5
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 4.0e-158 562.4 657 50.4
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 8.9e-158 561.2 656 48.6
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 1.2e-157 560.8 657 49.5
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 2.0e-157 560.1 659 50.1
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 7.6e-157 558.1 660 48.6
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 1.7e-156 557.0 644 49.5
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 3.8e-156 555.8 665 50.8
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 4.9e-156 555.4 665 50.7
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 1.4e-155 553.9 665 50.7
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 2.4e-155 553.1 675 47.4
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 1.2e-154 550.8 652 49.7
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 1.2e-154 550.8 661 49.5
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 1.0e-153 547.7 649 49.6
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 3.0e-153 546.2 661 49.9
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 1.5e-152 543.9 663 48.6
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 3.3e-152 542.7 664 48.6
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 7.3e-152 541.6 474 59.5
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 7.3e-152 541.6 661 48.1
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 2.8e-151 539.7 474 59.5
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 8.1e-151 538.1 655 49.3
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 1.1e-150 537.7 709 46.4
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 3.1e-150 536.2 658 48.6
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 1.5e-149 533.9 474 59.5
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 2.6e-149 533.1 661 47.4
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 4.4e-149 532.3 475 59.8
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 4.9e-148 528.9 659 48.6
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 6.4e-148 528.5 660 49.1
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 8.4e-148 528.1 658 49.8
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 1.1e-147 527.7 651 49.9
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 1.9e-147 526.9 660 46.5
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 7.1e-147 525.0 657 48.1
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 1.2e-146 524.2 645 50.1
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 2.1e-146 523.5 475 59.6
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 2.1e-146 523.5 661 47.2
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 4.6e-146 522.3 646 49.4
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 1.0e-145 521.2 658 47.4
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 1.3e-145 520.8 661 46.9
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 2.3e-145 520.0 663 47.1
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 2.3e-145 520.0 659 46.7
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 6.6e-145 518.5 655 47.2
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 6.6e-145 518.5 663 46.3
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 1.9e-144 516.9 692 45.7
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 3.3e-144 516.2 667 46.8
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 3.3e-144 516.2 649 47.0
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 4.3e-144 515.8 647 48.4
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 5.6e-144 515.4 664 47.0
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 7.3e-144 515.0 651 48.4
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 9.6e-144 514.6 649 48.1
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 8.1e-143 511.5 479 57.4
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 1.1e-142 511.1 651 46.7
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 1.4e-142 510.8 645 48.7
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 1.4e-142 510.8 656 47.3
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 1.8e-142 510.4 652 48.9
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 3.1e-142 509.6 648 48.3
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 3.1e-142 509.6 649 48.7
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 5.3e-142 508.8 664 47.3
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 9.0e-142 508.1 644 48.1
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 1.2e-141 507.7 644 48.3
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 1.2e-141 507.7 647 47.6
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 2.0e-141 506.9 644 48.1
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 2.0e-141 506.9 645 48.2
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 3.4e-141 506.1 659 46.1
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 2.9e-140 503.1 651 48.4
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 2.4e-139 500.0 649 47.6
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 2.4e-139 500.0 649 47.6
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 3.3e-136 489.6 648 47.8
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 1.7e-132 477.2 659 44.0
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 2.1e-127 460.3 480 53.5
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 1.1e-126 458.0 620 46.1
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 1.1e-123 448.0 669 42.6
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 3.5e-122 443.0 634 45.1
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 6.0e-122 442.2 471 51.4
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 1.6e-119 434.1 370 61.6
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 1.5e-112 411.0 635 42.0
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 4.3e-112 409.5 551 47.2
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 4.8e-111 406.0 916 34.3
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 6.3e-103 379.0 479 45.1
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 2.0e-101 374.0 659 38.4
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 3.6e-98 363.2 488 43.2
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 8.0e-98 362.1 521 43.0
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 2.6e-96 357.1 656 38.6
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 7.0e-94 349.0 470 45.7
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 5.0e-92 342.8 490 42.9
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 1.5e-91 341.3 456 45.4
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 9.4e-91 338.6 522 41.0
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 1.1e-70 271.9 289 50.9
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 4.1e-70 270.0 347 46.7
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.3e-68 265.0 312 46.2
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.2e-48 198.7 231 45.5
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.2e-48 198.7 231 45.5
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 1.9e-46 191.4 427 32.3
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 4.4e-40 170.2 147 58.5
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.4e-38 165.2 177 49.7
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 6.0e-37 159.8 456 28.9
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 1.9e-35 154.8 632 26.4
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 3.1e-33 147.5 158 48.7
CSS0009313 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 2.8e-18 97.8 71 69.0
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 6.2e-18 96.7 234 31.2
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 2.4e-17 94.7 106 54.7
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 3.4e-16 90.9 422 27.3
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 3.8e-15 87.4 64 60.9
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 3.2e-14 84.3 72 56.9
PGSC0003DMG400019116 Solanum tuberosum HOM05D005077 ORTHO05D018175 5.5e-14 83.6 68 58.8
CSS0021399 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 3.5e-13 80.9 66 59.1
CSS0037989 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 1.0e-12 79.3 66 59.1
Atru.chr2.994 Acer truncatum HOM05D005077 ORTHO05D018175 2.6e-08 64.7 100 43.0


User provided reference genes

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