Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041220.1 Olea europaea HOM05D003948 ORTHO05D004610 3.7e-88 328.2 166 100.0
Dinv36546 Davidia involucrata HOM05D003948 ORTHO05D004610 1.4e-26 123.6 82 70.7
Duzib187G0771 Durio zibethinus HOM05D003948 ORTHO05D004610 1.8e-26 123.2 81 72.8
COL.COLO4_05762 Corchorus olitorius HOM05D003948 ORTHO05D004610 2.4e-26 122.9 81 70.4
Dinv41531 Davidia involucrata HOM05D003948 ORTHO05D004610 5.3e-26 121.7 81 70.4
Lj7A632T42 Lonicera japonica HOM05D003948 ORTHO05D004610 6.9e-26 121.3 81 70.4
FAN26G0686 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.5e-25 120.2 75 70.7
FAN26G3201 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.5e-25 120.2 75 70.7
Gohir.A05G017900 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.5e-25 120.2 81 69.1
Actinidia01766 Actinidia chinensis HOM05D003948 ORTHO05D004610 2.0e-25 119.8 80 68.8
Actinidia15794 Actinidia chinensis HOM05D003948 ORTHO05D004610 2.0e-25 119.8 80 68.8
Dinv30573 Davidia involucrata HOM05D003948 ORTHO05D004610 2.0e-25 119.8 80 68.8
Gohir.A07G034800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.0e-25 119.8 75 74.7
Haze_16515 Corylus avellana HOM05D003948 ORTHO05D004610 2.6e-25 119.4 80 70.0
Gorai.001G040900 Gossypium raimondii HOM05D003948 ORTHO05D004610 2.6e-25 119.4 75 74.7
Cfa002007 Carpinus fangiana HOM05D003948 ORTHO05D004610 4.5e-25 118.6 80 68.8
FAN23G0975 Fragaria x ananassa HOM05D003948 ORTHO05D004610 5.8e-25 118.2 75 69.3
FAN28G1194 Fragaria x ananassa HOM05D003948 ORTHO05D004610 5.8e-25 118.2 75 69.3
Thecc.09G123100 Theobroma cacao HOM05D003948 ORTHO05D004610 5.8e-25 118.2 80 68.8
Ciclev10008863m.g Citrus clementina HOM05D003948 ORTHO05D004610 7.6e-25 117.9 81 67.9
FvH4_1g03590 Fragaria vesca HOM05D003948 ORTHO05D004610 1.0e-24 117.5 75 69.3
FAN19G2000 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.0e-24 117.5 75 69.3
Hma1.2p1_0018F.1_g012640 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 1.0e-24 117.5 80 71.2
Gohir.D07G038800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.3e-24 117.1 75 73.3
Hma1.2p1_0018F.1_g012660 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 1.3e-24 117.1 82 65.9
MBI04_g24205_MAGBIO Magnolia biondii HOM05D003948 ORTHO05D004610 1.3e-24 117.1 81 66.7
RcHm_v2.0_Chr2g0089121 Rosa chinensis HOM05D003948 ORTHO05D004610 1.3e-24 117.1 75 69.3
Haze_25613 Corylus avellana HOM05D003948 ORTHO05D004610 1.7e-24 116.7 77 70.1
CiPaw.01G244700 Carya illinoinensis HOM05D003948 ORTHO05D004610 2.2e-24 116.3 77 68.8
COL.COLO4_12905 Corchorus olitorius HOM05D003948 ORTHO05D004610 2.2e-24 116.3 75 69.3
Gorai.009G019200 Gossypium raimondii HOM05D003948 ORTHO05D004610 2.2e-24 116.3 81 67.9
CiPaw.03G241800 Carya illinoinensis HOM05D003948 ORTHO05D004610 2.9e-24 115.9 80 67.5
Prupe.7G239700 Prunus persica HOM05D003948 ORTHO05D004610 2.9e-24 115.9 77 64.9
TAR625G1371 Trochodendron aralioides HOM05D003948 ORTHO05D004610 2.9e-24 115.9 77 68.8
Gohir.D05G018800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.8e-24 115.5 79 68.4
Gohir.D05G126200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.8e-24 115.5 80 63.8
Gorai.009G130200 Gossypium raimondii HOM05D003948 ORTHO05D004610 3.8e-24 115.5 80 63.8
PGR142G4293 Punica granatum HOM05D003948 ORTHO05D004610 3.8e-24 115.5 80 68.8
ClCG07G012790 Citrullus lanatus HOM05D003948 ORTHO05D004610 5.0e-24 115.2 75 72.0
Ciclev10026043m.g Citrus clementina HOM05D003948 ORTHO05D004610 5.0e-24 115.2 80 65.0
Gohir.A05G125200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 5.0e-24 115.2 79 64.6
Hma1.2p1_0317F.1_g123650 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 5.0e-24 115.2 80 66.2
Sed0014623 Sechium edule HOM05D003948 ORTHO05D004610 5.0e-24 115.2 77 68.8
TWI34G1010 Tripterygium wilfordii HOM05D003948 ORTHO05D004610 5.0e-24 115.2 81 67.9
vmacro20597 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 5.0e-24 115.2 80 68.8
Duzib168G1107 Durio zibethinus HOM05D003948 ORTHO05D004610 6.5e-24 114.8 77 70.1
GSVIVG01017270001 Vitis vinifera HOM05D003948 ORTHO05D004610 6.5e-24 114.8 80 66.2
CARHR015950 Cardamine hirsuta HOM05D003948 ORTHO05D004610 8.4e-24 114.4 77 64.9
Thhalv10008186m.g Eutrema salsugineum HOM05D003948 ORTHO05D004610 8.4e-24 114.4 77 66.2
C05p13580 Brassica napus HOM05D003948 ORTHO05D004610 1.1e-23 114.0 77 66.2
MELO3C017899.2 Cucumis melo HOM05D003948 ORTHO05D004610 1.1e-23 114.0 75 69.3
Potri.003G061800 Populus trichocarpa HOM05D003948 ORTHO05D004610 1.1e-23 114.0 80 65.0
Actinidia40456 Actinidia chinensis HOM05D003948 ORTHO05D004610 1.4e-23 113.6 81 65.4
Nn8g39388 Nelumbo nucifera HOM05D003948 ORTHO05D004610 1.4e-23 113.6 80 67.5
QL02p087786 Quercus lobata HOM05D003948 ORTHO05D004610 1.4e-23 113.6 82 65.9
Sabra03G0035900 Salix brachista HOM05D003948 ORTHO05D004610 1.4e-23 113.6 80 63.8
DCAR_025486 Daucus carota HOM05D003948 ORTHO05D004610 1.9e-23 113.2 77 70.1
BolC5t30094H Brassica oleracea HOM05D003948 ORTHO05D004610 2.5e-23 112.8 77 64.9
CsaV3_4G001410 Cucumis sativus L. HOM05D003948 ORTHO05D004610 2.5e-23 112.8 75 68.0
Carub.0001s1520 Capsella rubella HOM05D003948 ORTHO05D004610 3.2e-23 112.5 77 63.6
A06p11460 Brassica napus HOM05D003948 ORTHO05D004610 4.2e-23 112.1 77 63.6
BraA06t24323Z Brassica rapa HOM05D003948 ORTHO05D004610 4.2e-23 112.1 77 63.6
CSS0012666 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 4.2e-23 112.1 81 65.4
Cc06_g08780 Coffea canephora HOM05D003948 ORTHO05D004610 4.2e-23 112.1 76 67.1
RcHm_v2.0_Chr2g0136511 Rosa chinensis HOM05D003948 ORTHO05D004610 4.2e-23 112.1 80 63.8
GSVIVG01015502001 Vitis vinifera HOM05D003948 ORTHO05D004610 7.1e-23 111.3 77 66.2
BcaC05g25483 Brassica carinata HOM05D003948 ORTHO05D004610 9.3e-23 110.9 77 63.6
Atru.chr7.1198 Acer truncatum HOM05D003948 ORTHO05D004610 1.2e-22 110.5 81 61.7
Eucgr.J03052 Eucalyptus grandis HOM05D003948 ORTHO05D004610 1.2e-22 110.5 75 64.0
Medtr4g114000 Medicago truncatula HOM05D003948 ORTHO05D004610 1.2e-22 110.5 82 61.0
Ah.01g011210 Amaranthus hybridus HOM05D003948 ORTHO05D004610 1.6e-22 110.2 82 57.3
AL1G27520 Arabidopsis lyrata HOM05D003948 ORTHO05D004610 1.6e-22 110.2 77 62.3
AT1G15410 Arabidopsis thaliana HOM05D003948 ORTHO05D004610 1.6e-22 110.2 77 62.3
CANSAT11G2309 Cannabis sativa HOM05D003948 ORTHO05D004610 1.6e-22 110.2 81 59.3
ClCG06G010930 Citrullus lanatus HOM05D003948 ORTHO05D004610 1.6e-22 110.2 77 64.9
MELO3C026644.2 Cucumis melo HOM05D003948 ORTHO05D004610 1.6e-22 110.2 77 64.9
Gohir.D10G075401 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.6e-22 110.2 80 62.5
Aqoxy7G02097 Aquilegia oxysepala HOM05D003948 ORTHO05D004610 2.1e-22 109.8 75 66.7
CAN.G407.106 Capsicum annuum HOM05D003948 ORTHO05D004610 2.1e-22 109.8 77 64.9
Peaxi162Scf00274g00859 Petunia axillaris HOM05D003948 ORTHO05D004610 2.1e-22 109.8 77 63.6
Sp1g13770 Schrenkiella parvula HOM05D003948 ORTHO05D004610 2.1e-22 109.8 77 62.3
Sed0015734 Sechium edule HOM05D003948 ORTHO05D004610 2.1e-22 109.8 77 66.2
TPR.G37189 Trifolium pratense HOM05D003948 ORTHO05D004610 2.1e-22 109.8 77 63.6
arahy.Tifrunner.gnm1.ann1.37ZKFY Arachis hypogaea HOM05D003948 ORTHO05D004610 2.7e-22 109.4 82 62.2
arahy.Tifrunner.gnm1.ann1.U8XBHX Arachis hypogaea HOM05D003948 ORTHO05D004610 2.7e-22 109.4 82 62.2
EL10Ac9g21937 Beta vulgaris HOM05D003948 ORTHO05D004610 2.7e-22 109.4 77 63.6
Cpa.g.sc648.2 Carica papaya HOM05D003948 ORTHO05D004610 2.7e-22 109.4 77 66.2
AUR62011555 Chenopodium quinoa HOM05D003948 ORTHO05D004610 2.7e-22 109.4 77 64.9
Ca_01082_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 2.7e-22 109.4 77 62.3
Ca_21696_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 2.7e-22 109.4 82 61.0
Glyma.13G363700 Glycine max HOM05D003948 ORTHO05D004610 2.7e-22 109.4 80 60.0
Gorai.011G081300 Gossypium raimondii HOM05D003948 ORTHO05D004610 2.7e-22 109.4 80 61.2
Lj3g0025185 Lotus japonicus HOM05D003948 ORTHO05D004610 2.7e-22 109.4 77 64.9
Cpa.g.sc10.224 Carica papaya HOM05D003948 ORTHO05D004610 3.5e-22 109.0 80 61.2
AUR62016374 Chenopodium quinoa HOM05D003948 ORTHO05D004610 3.5e-22 109.0 77 63.6
FAN05G4627 Fragaria x ananassa HOM05D003948 ORTHO05D004610 3.5e-22 109.0 77 66.2
Gohir.A10G076166 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.5e-22 109.0 94 55.3
Medtr2g103300 Medicago truncatula HOM05D003948 ORTHO05D004610 3.5e-22 109.0 77 63.6
Rhsim01G0076700 Rhododendron simsii HOM05D003948 ORTHO05D004610 3.5e-22 109.0 80 65.0
vmacro18966 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 3.5e-22 109.0 80 62.5
VMungo1080G0933 Vigna mungo HOM05D003948 ORTHO05D004610 3.5e-22 109.0 77 64.9
FAN02G3756 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.6e-22 108.6 77 64.9
FAN14G0295 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.6e-22 108.6 77 66.2
Nitab4.5_0002257g0010 Nicotiana tabacum HOM05D003948 ORTHO05D004610 4.6e-22 108.6 77 63.6
Psat4g040400 Pisum sativum HOM05D003948 ORTHO05D004610 4.6e-22 108.6 82 58.5
Rhsim01G0076600 Rhododendron simsii HOM05D003948 ORTHO05D004610 4.6e-22 108.6 80 65.0
Sabra01G0139400 Salix brachista HOM05D003948 ORTHO05D004610 4.6e-22 108.6 80 60.0
Actinidia22003 Actinidia chinensis HOM05D003948 ORTHO05D004610 6.1e-22 108.2 81 60.5
Glyma.15G010100 Glycine max HOM05D003948 ORTHO05D004610 6.1e-22 108.2 77 63.6
Lj4g0000861 Lotus japonicus HOM05D003948 ORTHO05D004610 7.9e-22 107.8 92 54.3
Manes.11G053200 Manihot esculenta HOM05D003948 ORTHO05D004610 7.9e-22 107.8 80 61.2
Manes.14G130600 Manihot esculenta HOM05D003948 ORTHO05D004610 7.9e-22 107.8 75 66.7
Lalb_Chr22g0351001 Lupinus albus HOM05D003948 ORTHO05D004610 1.0e-21 107.5 77 62.3
Nitab4.5_0006574g0020 Nicotiana tabacum HOM05D003948 ORTHO05D004610 1.0e-21 107.5 77 62.3
Solyc03g116460.4 Solanum lycopersicum HOM05D003948 ORTHO05D004610 1.0e-21 107.5 84 59.5
Sopen03g035350 Solanum pennellii HOM05D003948 ORTHO05D004610 1.0e-21 107.5 84 59.5
PGR031G2458 Punica granatum HOM05D003948 ORTHO05D004610 1.8e-21 106.7 80 62.5
PGSC0003DMG402000630 Solanum tuberosum HOM05D003948 ORTHO05D004610 2.3e-21 106.3 84 58.3
arahy.Tifrunner.gnm1.ann1.T1A9DJ Arachis hypogaea HOM05D003948 ORTHO05D004610 3.0e-21 105.9 76 61.8
CANSAT56G2529 Cannabis sativa HOM05D003948 ORTHO05D004610 3.0e-21 105.9 76 64.5
ECA232G2488 Erigeron canadensis HOM05D003948 ORTHO05D004610 3.0e-21 105.9 77 62.3
Hund06577 Selenicereus undatus HOM05D003948 ORTHO05D004610 3.0e-21 105.9 77 61.0
THA.LOC104813569 Tarenaya hassleriana HOM05D003948 ORTHO05D004610 3.0e-21 105.9 82 59.8
arahy.Tifrunner.gnm1.ann1.VXE6AC Arachis hypogaea HOM05D003948 ORTHO05D004610 3.9e-21 105.5 76 61.8
Glyma.05G008200 Glycine max HOM05D003948 ORTHO05D004610 5.1e-21 105.1 84 54.8
TPR.G10716 Trifolium pratense HOM05D003948 ORTHO05D004610 5.1e-21 105.1 80 57.5
Lsat_1_v5_gn_4_105880 Lactuca sativa HOM05D003948 ORTHO05D004610 6.7e-21 104.8 77 62.3
Psat5g301000 Pisum sativum HOM05D003948 ORTHO05D004610 6.7e-21 104.8 74 63.5
Prupe.3G081000 Prunus persica HOM05D003948 ORTHO05D004610 6.7e-21 104.8 77 61.0
Ah.09g225870 Amaranthus hybridus HOM05D003948 ORTHO05D004610 8.7e-21 104.4 77 63.6
Glyma.17G116500 Glycine max HOM05D003948 ORTHO05D004610 8.7e-21 104.4 84 57.1
Rhsim08G0216000 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.1e-20 104.0 81 56.8
Eucgr.C01133 Eucalyptus grandis HOM05D003948 ORTHO05D004610 1.5e-20 103.6 80 62.5
Phvul.003G162800 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 1.5e-20 103.6 84 57.1
ATR1156G038 Amborella trichopoda HOM05D003948 ORTHO05D004610 1.9e-20 103.2 77 61.0
CDE02G2452 Ceratophyllum demersum HOM05D003948 ORTHO05D004610 3.3e-20 102.4 77 55.8
VMungo1215G2012 Vigna mungo HOM05D003948 ORTHO05D004610 3.3e-20 102.4 84 56.0
MSTRG.11117 Avicennia marina HOM05D003948 ORTHO05D004610 4.3e-20 102.1 77 63.6
Lj3g0004615 Lotus japonicus HOM05D003948 ORTHO05D004610 4.3e-20 102.1 74 63.5
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 5.7e-20 101.7 77 63.6
Cc04_g04060 Coffea canephora HOM05D003948 ORTHO05D004610 9.7e-20 100.9 77 59.7
SGA_v2.0_scaffold5G02657 Striga asiatica HOM05D003948 ORTHO05D004610 1.3e-19 100.5 77 58.4
AUR62033477 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.6e-19 100.1 77 62.3
SEGI_16675 Sequoiadendron giganteum HOM05D003948 ORTHO05D004610 2.2e-19 99.8 77 55.8
DCAR_014870 Daucus carota HOM05D003948 ORTHO05D004610 4.8e-19 98.6 80 57.5
Migut.D01056 Erythranthe guttata HOM05D003948 ORTHO05D004610 4.8e-19 98.6 73 60.3
Lj1g0003343 Lotus japonicus HOM05D003948 ORTHO05D004610 8.2e-19 97.8 80 56.2
SalBow2G0819 Salvia bowleyana HOM05D003948 ORTHO05D004610 1.1e-18 97.4 78 56.4
EL10Ac8g18617 Beta vulgaris HOM05D003948 ORTHO05D004610 1.4e-18 97.1 77 59.7
CSS0016874 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 2.4e-18 96.3 80 60.0
MD17G1205400 Malus domestica HOM05D003948 ORTHO05D004610 2.4e-18 96.3 84 60.7
MD17G1205900 Malus domestica HOM05D003948 ORTHO05D004610 3.1e-18 95.9 84 61.9
Peaxi162Scf00274g00858 Petunia axillaris HOM05D003948 ORTHO05D004610 3.1e-18 95.9 77 58.4
Rhsim03G0104000 Rhododendron simsii HOM05D003948 ORTHO05D004610 3.1e-18 95.9 74 56.8
Os01g0555200 Oryza sativa ssp. japonica HOM05D003948 ORTHO05D004610 5.3e-18 95.1 79 51.9
Lj5A69T36 Lonicera japonica HOM05D003948 ORTHO05D004610 1.2e-17 94.0 76 61.8
SalBow2G2418 Salvia bowleyana HOM05D003948 ORTHO05D004610 4.5e-17 92.0 73 56.2
Zm00001eb342320 Zea mays HOM05D003948 ORTHO05D004610 1.9e-15 86.7 77 48.1
Mapoly0023s0100 Marchantia polymorpha HOM05D003948 ORTHO05D004610 1.2e-14 84.0 75 48.0
SMO271G0179 Selaginella moellendorffii HOM05D003948 ORTHO05D004610 3.1e-10 69.3 74 47.3
Atru.chr1.3072 Acer truncatum HOM05D003948 ORTHO05D004610 3.8e-08 62.4 51 54.9
Dinv38099 Davidia involucrata HOM05D003948 ORTHO05D004610 9.4e-07 57.8 37 70.3


User provided reference genes

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